XLOC_014747


Basic Information

Item Value
gene id XLOC_014747
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23051978 ~ 23052463 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029774
TGCTCACTCGAGGTTCAGATATTTTCTATTAtgatgtctcTCTCAGAGTCTCATCAAGAGGTTCAGTCTCCTGAGTGCCTGTCTATTCAAGCAGGGGAGTCTGCCTCTATCAGCTGTTCTGGGACCAGTGGAGTAGGTAATGACATGAGCTGGTATTTGCAGAAACCTGGAAAAGCTCCTAAACTCCTGATCTATGGCATAAGTCACCTTGAACCTGGAGTCTCAGATCGATTCATTGGAAGTGGATCTGAACCTGATTTTACTCTGAACATACGTGCAGTCCAGCCTGAAGATGCAGGAGTTTATTACTGTATGGGGTACTATGGTGATGATACGTTCA
>TCONS_00029148
aTGATTTCTTTTATTCTAATGTTGGAGACACTTTTTCTGCTCACTCGAGAGTCTCATCAAGAGGTTCAGTCTCCTGAGTGCCTGTCTATTCAAGCAGGGGAGTCTGCCTCTATCAGCTGTTCTGGGACCAGTGGAGTAGGTAATGACATGAGCTGGTATTTGCAGAAACCTGGAAAAGCTCCTAAACTCCTGATCTATGGCATAAGTCACCTTGAACCTGGAGTCTCAGATCGATTCATTGGAAGTGGATCTGAACCTGATTTTACTCTGAACATACGTGCAGTCCAGCCTGAAGATGCAGGAGTTTATTACTGTATGGGGTACTATGGTGATGATACGTTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000074426

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029774 False 340 lncRNA 0.45 2 23051978 23052426
TCONS_00029148 True 343 IG_V_pseudogene 0.44 2 23051978 23052463

Neighbor

gene id symbol gene type direction distance location
XLOC_014746 BX571825.11 coding downstream 962 23050777 ~ 23051016 (-)
XLOC_014745 BX571825.8 coding downstream 3759 23047917 ~ 23048219 (-)
XLOC_014744 BX571825.3 coding downstream 4696 23046800 ~ 23047282 (-)
XLOC_014743 BX571825.10 coding downstream 9022 23042486 ~ 23042956 (-)
XLOC_014742 NA coding downstream 82417 22965786 ~ 22969561 (-)
XLOC_014748 BX571825.6 coding upstream 11562 23064025 ~ 23064838 (-)
XLOC_014749 BX571825.9 coding upstream 61733 23114196 ~ 23114482 (-)
XLOC_014750 BX571825.2 coding upstream 67935 23120398 ~ 23120927 (-)
XLOC_014751 BX571825.12 coding upstream 76200 23128663 ~ 23129301 (-)
XLOC_014752 grb10a coding upstream 83707 23136170 ~ 23249822 (-)
XLOC_014711 CR382300.3 misc downstream 3323223 19728690 ~ 19728755 (-)
XLOC_014753 BX914202.1 non-coding upstream 167014 23219477 ~ 23219595 (-)

Expression


Co-expression Network