XLOC_014754


Basic Information

Item Value
gene id XLOC_014754
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23285194 ~ 23288120 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030219
gttaggactgGCCTGATTGGTGATCATACgtagctaatgcagaaccagccatgttcaatcataatctagtgatcctctcgaaattagtttataaataaacttcgaTAACCCCAATCACTCCATACATAATACACATTTATGCACATACACCtatgcatttacacacatgatacactccatacatatacacacgttacattctatacatatacacacgatacactccatacaaattcacacatgatacactctgtGCATATGCAAACATGAGACACTCCTTGCATATTCATgcacacatgacacacacacacacacacacggtacacaatatacactatatacatatggacaaatgatacactccatacagaTGGACACAAGGTACACTCCATGCATATGCATGCACACCTGATACGATCCATGCTTATGCATGCACACATGATAAACTTTATACATATGATACACAAGATGCACTCCATATTCATGATACACATATTACAttctataaatacacacacatgatacactccatacaaataTACTCAGATGATACACtccacacactctatacatatgcacacatgatacactcagtACGTAaatgtcagggtctgggatagatcCCGGGTCTCTGGCGTGAAAGGTGAGTCACTGAGCTATTGGGAGTTGATAACCCCAAACACtttatacattcacacacatggtAAACTCTATTTATATGCACactccattcatatgcacacataatacactccatacataaacAAAGATGACAAACTCCATATAAATAATACACTTTATACATGTGCACTCATGATACTCCTCATAGATATGTACACAGGATACACTCCATACAAGTATACAAGTATACACATGATACagtctatacatacacacactatacatatacacacataatacagcccatatatatgcacacatgatacactccatacttatacacacattacactctatacatatgcatgCACAACTGATACACTCCATGCATATGCTTTCACACAAGATACGCTCCATagacatgatacactttatacatatacacagacatgatacactccatacaaatacacacagatgacacttcatacatgtcagggtctgggatagaaccccgGTCTCTGGTGTTAAAGGTGAGTCAAATACaccatacaaatacacacatgattcACTCCATGCATATACAAagatgatacactccatacacatACGCACAAGATACAATCTATACGTATACAAACTTGGtacactgtacatatacacaagtgctgtcaatcgattaaaaagaattaactaataaattgcacattttttgtaattaatcgagattaatcatgattaaaatactgacatttgtaattctgtatattcaaatgtaaaatgtaaattgatGTAAACTCAAGACAAAGAAACTAATTAAAttcgaaatacattttttttgtttaatttgtaacAGATTTCCTCATTTAAactacataacaaaaaaaaacttaaatattgtCAAACTTAACTGTTGGCTTAAAAGGCATGTAAGTCCcgtttgaattttaaaacaataaatgccaataaaaacaaacaaacaaaaaaagatttccaTGCTGGATTTTAGGAGGACTGCAAAAAATCCAAAATATTGGCACTGGAAAAACTATTATTAGTAGATTATGAGTAGAAAATaatttgcttagtcctcctttacttTCAGTCAGTTGCTGAGACAGTCTGTTGACATAATCTGGGGACAATGTGGCCCTTTTCTTTTGGATGATGTGACCTGAGAGTAAGAACAGTCTCTCACAGGGCACAGTGGTAGCAGGAGTTGACAGATACTTGTGTGGTATTAGTGCCAGCCTAGCATGCGTTGCTTCTCTCTTTGACCACCACTGTAGTGGACAACCCTCCATTTGCATTTTGGGCTCTGCTTTGTAGCGGTTCAGACATTGTTCTATGGACTCTTCTACTTCATCTGATTCTGAATCGGAAGTAAATAACAAGACGGAGATTCTTCTCTTATTTGGTGTCTGTTGGTCTGTTGTCTCTTTAGACTCTTGTTTTCCAAGAGTTTCTGTCATTAACAGCTTGCTTACTGAAGTCCACACCTCATTCCTTTCATCTTTGGAAAGACACTTCAGGTCTTTAAACCTTGGGTCAATTACAGTAGCGATCTTCAGCCATGTGAGATTAGTGCTGTCTTTCCTTTTAGATAGGTCTGAGGTAAAATCCTTTTTGAATTTAACTACATAGGCTGGATCATCCTCTGTCCGTTCCATAATTTTGAACAAGTGGCACATAGCTGGCAATACCACTGAACAGGAGATGAACTGCTCTCCTCTTAGCAGTTCAGTTATGTGTCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030219 True 2376 lncRNA 0.37 2 23285194 23288120

Neighbor

gene id symbol gene type direction distance location
XLOC_014752 grb10a coding downstream 35372 23136170 ~ 23249822 (-)
XLOC_014753 BX914202.1 coding downstream 65599 23219477 ~ 23219595 (-)
XLOC_014751 BX571825.12 coding downstream 155893 23128663 ~ 23129301 (-)
XLOC_014750 BX571825.2 coding downstream 164267 23120398 ~ 23120927 (-)
XLOC_014749 BX571825.9 coding downstream 170712 23114196 ~ 23114482 (-)
XLOC_014755 NA coding upstream 17042 23305162 ~ 23305720 (-)
XLOC_014756 pimr90 coding upstream 79881 23368001 ~ 23369282 (-)
XLOC_014757 pimr81 coding upstream 93211 23381331 ~ 23382619 (-)
XLOC_014758 NA coding upstream 121895 23410015 ~ 23411861 (-)
XLOC_014759 pimr77 coding upstream 129958 23418078 ~ 23419342 (-)
XLOC_014711 CR382300.3 misc downstream 3556439 19728690 ~ 19728755 (-)
XLOC_014748 BX571825.6 non-coding downstream 220356 23064025 ~ 23064838 (-)
XLOC_014760 NA non-coding upstream 147838 23435958 ~ 23437400 (-)
XLOC_014768 NA non-coding upstream 336993 23625113 ~ 23627929 (-)
XLOC_014772 NA non-coding upstream 432149 23720269 ~ 23726829 (-)

Expression


Co-expression Network