XLOC_014756 (pimr90)


Basic Information

Item Value
gene id XLOC_014756
gene name pimr90
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23368001 ~ 23369282 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029156
GTGACATTCTGGACCAGTATGAGCTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGCAAGCGCTTGGAGGATGGCCTtgagGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCAACATCGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATCGGCCTGTTGATACTGGCTCATAGAGGCGGCAAGGTTCCAGAGATCATTGAGCTGCTGGACTGGCAGGACCAGCAGGATTGTTACATCATGATCCTGGAACGACCTTCACCCTGCACAAAGGAGTACTTCCCACCGGAGTACTACCTAGACGACGAATACCATGCAGAACCATCCACTGTATGGTCTTTAGGAGTTCTGTTATTCCTGCTGCTGTGTCAACGATTTCCTGAAGTCACGGACACGCAGAGGATCGATGATGGAAACTGGACTGAGCCTGGATTGTCAGAAGAATGCTGTGATTTGATTCAAGCTCTCCTGCAGGAAAACCCAAGCCAGCGGATTCCTCTGGAAGAAATCATTTTCCATCAATG
>TCONS_00030221
AGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGCAAGCGCTTGGAGGATGGCCTtgaggtgaacaatccctttaacatATATTATGTTCACTTTTTAGTGCACTTGATGTGATCATAACAGAAGTGTTGTTTTGTTGAACAGGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCAACATCGTAAGTAGACTTAAACATGTAAAGGCACTGACAACAGTATATTTGGGGAAGCAACACCGCCAAACTAATCTTTCTTCTAGGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATCGGCCTGTTGATACTGGCTCATAGAGGCGGCAAGGTTCCAGAGATCATTGAGCTGCTGGACT

Function

symbol description
pimr90 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111332

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029156 False 550 mRNA 0.50 5 23368001 23369282
TCONS_00030221 True 374 lncRNA 0.44 1 23368879 23369252

Neighbor

gene id symbol gene type direction distance location
XLOC_014755 NA coding downstream 62281 23305162 ~ 23305720 (-)
XLOC_014754 NA coding downstream 79881 23285194 ~ 23288120 (-)
XLOC_014752 grb10a coding downstream 118179 23136170 ~ 23249822 (-)
XLOC_014753 BX914202.1 coding downstream 148406 23219477 ~ 23219595 (-)
XLOC_014751 BX571825.12 coding downstream 238700 23128663 ~ 23129301 (-)
XLOC_014757 pimr81 coding upstream 12049 23381331 ~ 23382619 (-)
XLOC_014758 NA coding upstream 40733 23410015 ~ 23411861 (-)
XLOC_014759 pimr77 coding upstream 48796 23418078 ~ 23419342 (-)
XLOC_014760 NA coding upstream 66676 23435958 ~ 23437400 (-)
XLOC_014761 pimr82 coding upstream 81211 23450493 ~ 23452345 (-)
XLOC_014711 CR382300.3 misc downstream 3639246 19728690 ~ 19728755 (-)
XLOC_014750 BX571825.2 non-coding downstream 247074 23120398 ~ 23120927 (-)
XLOC_014768 NA non-coding upstream 255831 23625113 ~ 23627929 (-)
XLOC_014772 NA non-coding upstream 350987 23720269 ~ 23726829 (-)
XLOC_014773 NA non-coding upstream 364005 23733287 ~ 23734065 (-)

Expression


Co-expression Network