XLOC_014762 (pimr80)


Basic Information

Item Value
gene id XLOC_014762
gene name pimr80
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23468771 ~ 23470709 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029161
GTGTTCCTAGTGAATTCTGTTATTATGGCATTGAAAAGAAAGCGTTGTTCTCAAGACACTCAAGTGTATGATTTACATACTCGTACACCTCCGATATCCAGCGCCAATGTGGCTGAGAACCATTCACCTGTTGGTGTTGGTGAGGAGATTGAGATACAAGTGAGAAAGAAGAGGAGGTGGGAGAGTTTTGAAAAGCCGCTCTCCCTTTACGCTGAGGATGACAACCAGTGGATGACTTTTCTCAGTGGCCAAAAGAGAAAACGAAGTTGTCACAGCTCTTATGTGAACAATTTCCATCCTCGTACACCTCCGATATCCATCACCAGCCTTCAGTCCACTGATGTTGCTGAGGAAAGTgagagaaagaggagaaggaCTGACAGTCCAGAAAAGCTGCTCTCCTGTAAAGTCCAGAAGTCCAGCAGCAGCTCTAGTGAGGAGGACCAGACTCCTGATCAGATTCACAAGAAGAGTTCTGAAGGTGACATTCTGGACCAGTATGAACTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGCAAGCGCTTGGAGGATGGCCTtgagGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCAACATCGCTGGTCATCCTGAGCCCCTTCCATTAGAGATCGGCCTGTTGATACTGGCTCATAGAGGCGGCAAGGTTCCAGAGATCATTGAGCTACTGGACTGGCAGGACCAGCAGGATCGTTACATCATGATCCTGGAACGACCTTCACCATGTATAGATCTGTTGGACTTCATAATGTCTCTCGGCTCCATCACTGAACGCCAGGCTCAAAAGATCATGGAGCAGGCAACAACGGCCGGTCTCATGTGCTGCAGACGTGGGGTATTCCACCGGGA

Function

symbol description
pimr80 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-402 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000114964

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029161 True 896 mRNA 0.49 5 23468771 23470709

Neighbor

gene id symbol gene type direction distance location
XLOC_014761 pimr82 coding downstream 16426 23450493 ~ 23452345 (-)
XLOC_014760 NA coding downstream 31371 23435958 ~ 23437400 (-)
XLOC_014759 pimr77 coding downstream 49429 23418078 ~ 23419342 (-)
XLOC_014758 NA coding downstream 56910 23410015 ~ 23411861 (-)
XLOC_014757 pimr81 coding downstream 86152 23381331 ~ 23382619 (-)
XLOC_014763 pimr76 coding upstream 17532 23488241 ~ 23489527 (-)
XLOC_014764 pimr79 coding upstream 54649 23525358 ~ 23526638 (-)
XLOC_014765 pimr75 coding upstream 78197 23548906 ~ 23550179 (-)
XLOC_014766 pimr83 coding upstream 103016 23573725 ~ 23576381 (-)
XLOC_014767 pimr85 coding upstream 121539 23592248 ~ 23594914 (-)
XLOC_014711 CR382300.3 misc downstream 3740016 19728690 ~ 19728755 (-)
XLOC_014755 NA non-coding downstream 163051 23305162 ~ 23305720 (-)
XLOC_014754 NA non-coding downstream 180651 23285194 ~ 23288120 (-)
XLOC_014753 BX914202.1 non-coding downstream 249176 23219477 ~ 23219595 (-)
XLOC_014768 NA non-coding upstream 154404 23625113 ~ 23627929 (-)
XLOC_014772 NA non-coding upstream 249560 23720269 ~ 23726829 (-)
XLOC_014773 NA non-coding upstream 262578 23733287 ~ 23734065 (-)
XLOC_014777 NA non-coding upstream 386403 23857112 ~ 23857592 (-)
XLOC_014781 NA non-coding upstream 523325 23994034 ~ 24063227 (-)

Expression


Co-expression Network