XLOC_014764 (pimr79)


Basic Information

Item Value
gene id XLOC_014764
gene name pimr79
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23525358 ~ 23526638 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029163
GACATTCTGGACCGGTATGAACTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGGAAGCACTTGGAGGATGGCCTtgagGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCAACATCGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATCGGCCTGTTGATACTGGCTCATAGAGGTGGCAAGGTTCCAGAGATTATTGAGCTTCTGGACTGGCAGGACCAGCAGGATTGTTACATCATGATCCTGGAAAGACCTTCACCATGCACAAAGGAGTACTTCCCACCGGAGTACTACCTAGACGACGAATACCATGCAGAACCATCCACTGTATGGTCTTTAGGAGTTCTGTTATTCCTGCTGCTGTGTCAACGATTTCCTGAAGTCACGGACACGCAGAGGATCGATGATGGAAACTGGACTGAGCCTGGATTGTCAGAAGAATGCTGTGACTTGATTCAAGCTCTCCTGCAGGAAAACCCAAGCCAGCGGATTCCTCTGGAAGAAATCATTCTCCATCAATGGTTTAAG
>TCONS_00030225
GGAGGATGGCCTtgaggtgaacaatccctttatcATATATTATGTTCACTTTTTAGTGCATTTGATGTGATTATAACAGAAGTGTTGTTTTGTTGAGCAGGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCAACATCGTAAGTAAACATGTAAAGGCACTGACAACAGTATATTTGGGGAAGCAACACCGCCTAACTAATCTTTCTTCTAGGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATCGGCCTGTTGATACTGGCTCATAGAGG

Function

symbol description
pimr79 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-590 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000110131

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029163 False 555 mRNA 0.49 5 23525358 23526638
TCONS_00030225 True 284 lncRNA 0.41 1 23526278 23526561

Neighbor

gene id symbol gene type direction distance location
XLOC_014763 pimr76 coding downstream 35831 23488241 ~ 23489527 (-)
XLOC_014762 pimr80 coding downstream 54649 23468771 ~ 23470709 (-)
XLOC_014761 pimr82 coding downstream 73013 23450493 ~ 23452345 (-)
XLOC_014760 NA coding downstream 87958 23435958 ~ 23437400 (-)
XLOC_014759 pimr77 coding downstream 106016 23418078 ~ 23419342 (-)
XLOC_014765 pimr75 coding upstream 22268 23548906 ~ 23550179 (-)
XLOC_014766 pimr83 coding upstream 47087 23573725 ~ 23576381 (-)
XLOC_014767 pimr85 coding upstream 65610 23592248 ~ 23594914 (-)
XLOC_014768 NA coding upstream 98475 23625113 ~ 23627929 (-)
XLOC_014769 pimr89 coding upstream 133686 23660324 ~ 23661556 (-)
XLOC_014711 CR382300.3 misc downstream 3796603 19728690 ~ 19728755 (-)
XLOC_014758 NA non-coding downstream 113497 23410015 ~ 23411861 (-)
XLOC_014755 NA non-coding downstream 219638 23305162 ~ 23305720 (-)
XLOC_014754 NA non-coding downstream 237238 23285194 ~ 23288120 (-)
XLOC_014753 BX914202.1 non-coding downstream 305763 23219477 ~ 23219595 (-)
XLOC_014772 NA non-coding upstream 193631 23720269 ~ 23726829 (-)
XLOC_014773 NA non-coding upstream 206649 23733287 ~ 23734065 (-)
XLOC_014777 NA non-coding upstream 330474 23857112 ~ 23857592 (-)
XLOC_014781 NA non-coding upstream 467396 23994034 ~ 24063227 (-)

Expression


Co-expression Network