XLOC_014775 (pimr87)


Basic Information

Item Value
gene id XLOC_014775
gene name pimr87
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23767577 ~ 23769201 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029172
GTGACATTCTGGACCAGTATGAACTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGGAAGCGCTTGGAGGATGGCCTtgagGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACATCCACATCGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATTGGCCTGTTGATACTGGCTCATAGAGGCGGCAAGGTTCCAGAGATCATTGAGCTGCTGGACTGGCAGGACCAGCAGGATCGTTACATCATGATCCTGGAACGACCTTCACCATGCACAAAGGAGTACTTCCCACCAGAGTACTACCTGGACGACGAATACCATGCAGAACCATCCACTGTATGGTCTTTAGGAGTTCTGTTATTCCTGCTGCTGTGTCAACGATTTCCTGAAGTCACGGACACGCAGAGGATCGATGATGGAAACTGGACTGAGCCTGGATTGTCAGAAGAATGCTGTGACTTGATTCAAGCTCTCCTGCAGGAAAACCCAAGCCAGCGGATTCCTCTGGAAGAAATCATTCTCCATCAATGGTTTAAG
>TCONS_00030230
ATCCACAAGAAGAGTTCTGAAGGTAAATCAAGTGATTTCAAGTGAAGGCTTTTTGAGAATGTGTGGCCTTCTCTCATGATCCTCTTCAGTATGAAGTAGAGTACATTACATTAAgttctgtaaatatataaatatattttttaaaagcactcTAAAAGTTTCAATCACTGTTTGCTGTATTTTGAAGTGTCCACCATATCAGTATTGTGCAGGTTCATTTTCACgatttattgaattattgaatatagTCATATGTCTATTCCACCTCAAACATTACACACGTGTCTGTCAGTGCTTGACATTTCACATCAGCTGCAAATATTCATCTTTTAACAGGTGACATTCTGGACCAGTATGAACTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGGAAGCGCTTGGAGGATGGCCTtgaggtgaacaatccctttaacatATATTATGTTCACTTTTTAGTGCACTTGATGTGATTATAACAGAAGTGTTGTTTTGTTGAGCAGGTGGCAGTAAAAATTGCCAGAAAGCCATCGAACATGAAATACA

Function

symbol description
pimr87 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116095

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029172 False 557 mRNA 0.50 5 23767577 23768865
TCONS_00030230 True 558 lncRNA 0.37 1 23768644 23769201

Neighbor

gene id symbol gene type direction distance location
XLOC_014774 pimr89 coding downstream 19900 23745832 ~ 23747677 (-)
XLOC_014773 NA coding downstream 33512 23733287 ~ 23734065 (-)
XLOC_014772 NA coding downstream 40748 23720269 ~ 23726829 (-)
XLOC_014771 pimr86 coding downstream 58026 23708263 ~ 23709551 (-)
XLOC_014770 BX927234.2 coding downstream 92673 23672489 ~ 23674904 (-)
XLOC_014776 pimr88 coding upstream 25634 23794835 ~ 23799729 (-)
XLOC_014777 NA coding upstream 87911 23857112 ~ 23857592 (-)
XLOC_014778 pimr92 coding upstream 101460 23870661 ~ 23871941 (-)
XLOC_014779 si:dkey-222b8.4 coding upstream 106181 23875382 ~ 23895839 (-)
XLOC_014780 chtopa coding upstream 128465 23897666 ~ 23918136 (-)
XLOC_014711 CR382300.3 misc downstream 4038822 19728690 ~ 19728755 (-)
XLOC_014768 NA non-coding downstream 139648 23625113 ~ 23627929 (-)
XLOC_014760 NA non-coding downstream 330177 23435958 ~ 23437400 (-)
XLOC_014758 NA non-coding downstream 355716 23410015 ~ 23411861 (-)
XLOC_014781 NA non-coding upstream 224833 23994034 ~ 24063227 (-)
XLOC_014784 BX547993.4 non-coding upstream 370579 24139780 ~ 24139894 (-)
XLOC_014785 NA non-coding upstream 372114 24141315 ~ 24145677 (-)
XLOC_014787 BX547993.2 non-coding upstream 413574 24182775 ~ 24182891 (-)

Expression


Co-expression Network