XLOC_014790 (BX547993.3)


Basic Information

Item Value
gene id XLOC_014790
gene name BX547993.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 24214225 ~ 24218942 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029192
ATGCATAAGCAAGCTCTACAACAGCTCAAAGATGCTTTAGCCCGTGCCACCACTGTATCATACTTTGCCCCCCTAAAAGACACTGAACTTGTTGTAGATGCCAGTCCAGTTGGGCTTGGTGCCATTTTATCACAAACACAAAATGGTCAAAAAAATGTCATTGCATATGCCAGTCGCGCACTCAGCGACACTGAAAAACGATACTCGCAAACTGAACGCGAGGCTCTAGCCATTGTATGGAGCTCAGGACTTGCAAGGCAAGAAAACAGAGAAAACCTGAATTCAAAACATGAAACTGGTGTGTgcagtgatgatgatgaagaacagcagtgtgctgatgaagtaaatgtTGAAGATGCTGTAGTGCCATGGACAAGACCCTGCATCCCTCCACCTGCATGCGTGTCCTCATCTGAGCCAGATGCTGGTGTGGTCTCTTCATCTTCAGTATGA
>TCONS_00030233
CTTTTTCAAGGCGTTCAGATTTGCGTGCACTATTCCATGTCGTATCCGTATAAACTCGTGAAAGAGAAAGCGAGAAATCTCCTACTGCTTCTGTCCACATTCTGAAGTGTTCATCAGATGGGTACATCTATCATAGGAGGCCACGAAAAACCATACGGAAAGATGATGATGCTACGTCACATTGTGGAAAACTGGATGGATTTAGACTTCTTACATtgatgatgatgaagaacagcagtgtgctgatgaagtaaatgtTGAAGATGCTGTAGTGCCATGGACAAGACCCTGCATCCCTCCACCTGCATGCGTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115439

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029192 False 453 mRNA 0.46 3 24214225 24218942
TCONS_00030233 True 313 lncRNA 0.44 2 24214273 24215346

Neighbor

gene id symbol gene type direction distance location
XLOC_014789 prf1.7 coding downstream 16041 24196088 ~ 24198184 (-)
XLOC_014788 BX547993.1 coding downstream 25482 24187594 ~ 24188743 (-)
XLOC_014787 BX547993.2 coding downstream 31334 24182775 ~ 24182891 (-)
XLOC_014786 prf1.2 coding downstream 50380 24161712 ~ 24163845 (-)
XLOC_014785 NA coding downstream 68548 24141315 ~ 24145677 (-)
XLOC_014791 prf1.7 coding upstream 2926 24221868 ~ 24224292 (-)
XLOC_014792 s100v2 coding upstream 43321 24262263 ~ 24267823 (-)
XLOC_014793 NA coding upstream 169123 24388065 ~ 24393032 (-)
XLOC_014794 thbs3b coding upstream 200751 24419693 ~ 24443867 (-)
XLOC_014795 mtx1b coding upstream 229642 24448584 ~ 24484758 (-)
XLOC_014711 CR382300.3 misc downstream 4485470 19728690 ~ 19728755 (-)
XLOC_014784 BX547993.4 non-coding downstream 74331 24139780 ~ 24139894 (-)
XLOC_014781 NA non-coding downstream 150998 23994034 ~ 24063227 (-)
XLOC_014798 NA non-coding upstream 467768 24686710 ~ 24688179 (-)
XLOC_014800 BX927310.2 non-coding upstream 537901 24756843 ~ 24756974 (-)
XLOC_014804 CU915256.1 non-coding upstream 837870 25056812 ~ 25060877 (-)
XLOC_014806 CU915256.2 non-coding upstream 865323 25084265 ~ 25086092 (-)

Expression


Co-expression Network