XLOC_014826 (skiv2l)


Basic Information

Item Value
gene id XLOC_014826
gene name skiv2l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 26869428 ~ 26923957 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029252
aacgaaacgaaaataaaacatttttgaataccaAATAATCTTAaatttttgaagtatgccataaaatattttagattctgATTTAACACgctttcttatttatttgtttgtttaacaacaaaaccaaaatcaagtgtagtagtgcaacaggattattcctgcttgaattattattttattttttatttttttgtaaaccaacaatgctgtgtgtttaAACCATTATTCAAAACATCAAAcatcaaaatatggtcaaccatttggtagagcaggcactTAATTAACTTAACTAATTGTATTTTGATTTCGAGTACATATTAAAGATTAGAaagtacatgtatatatatattgagaaaaGTAACAATCGTCTTTACCTTTTTCTTCAGTTTAGCATACTTCTTTTGCAGCGCTTCTTCGTCTTCTGTTAATGAACTGGGAAATATTGCCATTTTGCTGGACCTtaaggagaaaaacaacagcaatatGTTTAGCAAGCATAAGTATTTTGTTTTCAGTCTCAAGATAGCATCGTGTttttcacaaacatatatatttaatcgTAAGTTGCATAACATACAGCAAAATACACGCATTTACCCTAAATTCAAAGAATAAATTTTATGCGATGAGCGTCTGCAGTAAATCCTCACCTGGCGCGTAAATATGACGTAATCTGTTGTCATCCGAGAAAGGAGGTCAAATTAATCGTTTGTCCATACTGAGATAATTTTAAAGTATCTATTATTTAAAGTGCACCAATACTTTAGTGTGATTTAGATCACACACGTAGATCGTTAAATTATaaagcacaaaataaaataaaatgcatatactTCCGTCCCATTACTTCTGCGCAGCTTCCTGTAGGACTGCCTGAAACTTTATTGAAACTGGAGAACTGCTGAGTGACATGGACAAAATAGATTTGCCCCCAGTGGGTCCTGATGACTTGCCCCTGTCTCTGCTGGAGATGGGCTGTTCTGGGAGATTTGagctcatcacacacacactgcccaaAAACAAACCCCTGCCTCCGCACAGCActCTCCCACATGGACTGCCTCCTACTTGTCTGGATTTAAAGACAGAGGTAGAAAAGCGTTTTCTGCGAGATCCTGCTTGGCTCCCGGTACATGATGTAGATGATGCCTTCAACAAGTTCCTTAAGATAAGTAAGAGAGAAAAAGAAGTGGACTCTCTCCTGCACTGCTCTCTGTCTCAACTGCATTCTGGTCTGTCTGTGGTCAGAGATCCAACCACCGGCATGCTGCTGGATTTCACTGAGGTGTTGTTAGAGGACACAGGTTTGTCTGCAAAAAATTCACTCTCGTTACAAAGACAGCCTGGACCTCCGTCAGAGAGTCTGCGAGGGAGCAACACAAACTATCCATTTCTGCCAGCTGGAATGGAAGAACTGACTTTAGAGCAGATCAAAAACAAGTCAGAGCTGGAAGAAGACATTGACTTTGAGAAAGATTTGATGACAGTTCCTCCTGGGCTGAAGGCTGGTATGGACTTCAGTGACAAAGAAGCCAGAAACACGAAGAGTGAGGTGAACCTGCTGTCGCTTCTGTCTACTTTTGATGATGTCCTTGATGCTCCGCCAGAGGACAAAGAGGGAGTCTCACAAAAAGAGGAGATCGTTAAACTTCCCAGAACTAACAGCCTGGAGGATCTGGGCATTAAAGATTCGGGCAGCTCGCAGCCTCAAGGGAACACAGGCAGTCTGACtgaacaaaagaagaaaaacctGGAAGAAGAAAAGGGAGACAATAAAAAATGGGCCATTCCGGTGGACATCAGCTCACCGTGTGCTGACTTCTACAAACGGATCCCTGATCCAGCGTTTAAGTATCCCTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATTCTCCGTCTGGAAGCTCATGACTCTGTCTTTGTTGCGGCTCACACCTCAGCCGGCAAGACTGTGGTGGCTGAATACGCAATTGCACTTTCCCAGAAACACATGACCAGGACCATTTACACCTCCCCCATTAAGGCCTTGTCCAATCAGAAGTTCCGAGACTTCAAGAACACATTCGGTGATGTGGGACTTTTGACTGGAGACGTGCAACTGAACCCAGAAGGCTCATGTCTCATTATGACCACTGAGATTTTGAGATCGATGCTCTACAATGGCTCGGAGGTCATCAGAGATCTAGAATGGGTCATTTTTGATGAGGTTCACTATATCAATGATGCAGAGGTAAATCATCCACTAATAAATATAGTTCAGTTTTACTTTTCTCTTTACCGCATTCAGATGTCacataatgttgttgtttttcagagAGGAGTGGTGTGGGAGGAAGTGCTTATCATGTTGCCGGAGCATGTTAGCATCATCCTGCTCAGTGCCACAGTGCCAAACGCAGTGGAGTTCAGTGAATGGatcggGCGCATCAAGAAGCGACATATTTACGTGATCAGCACAATTAAGAGGCCTGTTCCTCTAGAGCACTATCTCTACACAGGCAACAGCACCAAGACTCAGAAAGAGCTCTTCATGTTGCTGGACGCAACTGGAAACTTTCTTACTAAAGGctacTACGCTGCAGTGGAAGCCAAGAAGGAGCGCACTAGTAAACATGCACAGTCTTTTGGCACAAAGAACGTATCGCAGCACAACACAACAGCCAGTCAGGATCGTGCGGTGTGGCAAACGCTGTTAAATTATCTGTCTCAGAGGCAGCAGACTCCAGTGGTGGCATTTACATTCTCTAGGACACGATGTGATGAAAACGCTCGCTCTTTGACCTCTCTGGACCTCACCACATCCATAGAGAAGAGCGAGATCCACTCCTTCCTGCAGAAGAGCCTGACCAGACTGAGAGGAGGAGATCGACAGCTACCACAGATCCTGCTGATGCGTGATTTGTTGAAGAGAGGGATTGGTGTTCATCACAGCGGCATCCTGCCAATCCTGAAGGAAGTCATTGAAATGCTCTTCTCCAGAGGTTTAGTGAAGGTTCTGTTTGCTACAGAGACTTTTGCCATGGGTGTGAACATGCCTGCCAGAACTGTTGTGTTTGACAGCATCCGCAAACACGACGGCACGGGATTCAGAAATCTGCTGCCCGgcgAGTACATTCAGATGGCGGGTCGTGCCGGCAGAAGAGGTTTGGATGCCACAGGAACTGTTATCATCCTCTGTAAAGCTGGAGTTCATGATATGGGAGAACTCCACTCAATGATGCTGGGGAAGCCGACGGTGCTGCACTCTCAGTTCAGACTGACCTACACCATGATTCTGAATCTGCTGCGTGTGGAGGCCCTGAGGGTCACCGACATGATGAAGAGAAGCTTCTCTGAAAACCACAGGGATACACAGGCTCACGAGAAGAGAATAAGTGAGCTGAGAAACACGCTGTCTTCTCTTCCTCCGCTGGACACGGAGGGGCAGTTGTCTGATTTACTGTCATATTACCACACAATCACAGAGCTGCACATCACCACACAGAGCCTGCAGCAAGCTGTTCTGGAGTCAGTCAATGGTCTCAAAGCTCTGTCTGTTGGAAGGGTGGTGATCGTGAACAACAGCCAGCATCACAACTCTCTGGGAGTCATTCTACAGGTGTCCAGCGATGCAGTAAATCGCACCTTCACCGCTCTCATTATCTGTGAGAAGGGTAACGAGGAGGCGGCCAGTGATGAGCAATCTAATAAAGTTGCACTTCCCATCTATAGCAAAACATTGTTTATTCCTGAggGACCCTGCAGTCATACTGTGCAGAAACTGAAGTTGCAGGACATTTCTGCTATTACAACCAAAGCACTCAAGGTCATACCAGAGAGAATCATCGACAACTACAACAAAAGACTACAGCCACGCTTCAGGCTTGATCCACCAGGTCAAGCTATCTCTACAGCAACCCAGGAGCTCCTTCGATTGGCTGAGGCAAATATGGGTGGCATGACCGTCCTTGACCCAGTGAATGACCTTCACCTAAAGGGTGTTGATGTGGTGGAGGGTGTGATGAGGCAGCGAGTGTTACAGGACTCTCTAAAAGACTTCCACTGTATCCACTCACCCACCTTCTCTGAACAGTTTACACGTGTGCAGGAGAGGATGAGTGTACAGGAAGAGCTTGATAAGCTTCTGTTCCTGGTGTCTGATCAGTCATTGACACTTCTGCCTGAGTACCATCAGAGAATCAAGGTGCTGGAAGCGCTGCAGTATGTGGACAGCAGTGGTGCGGTTCAGCTGAAGGGTCGTGTGGCATGTCAGATCAGCAGTCATGAGCTCTTACTGACTGAACTCCTGTTTGAGAACACTTTGAGTCCTCTGGCCCCTGAGGAGAGCGCCGCCCTGCTGTCCTGCCTCGTCTTCACACAGAACACCCAGATAGAGCCACATATCACCAACACACTGCAGGAGGGAATCAATCAAGTTCTCGCTGTAGCCCAGCGTATCGGTGACCTGCAGAGGGATTGTGGGATTGCTCAGACCGCTGAAGACTTCGTGGCCCAGTTCAAGTTTGGCCTGACTGAGGTTGTGTACTGCTGGGCAAGAGGAATGCCATTTGCTGAGATAGCCCAGCTGACAGATGTGCAGGAGGGAACAATCGTGCGCTGTATCCAGAGGCTGGACGAGGTCCTGAAGGAAGTCCGACAGGCTGCTCGCATTGTGGGTGACTCTGTCCTGGGCAGTAAGATGGAAAGAGCCTCTCTGGCCATACGCAGAGACATTGTGTTCACCGCCTCGCTCTACACACACTGAagcagacagacacaaacacactgttTGGAGTGGGGTATAATTATAGTGTACAGAACATGGACCTTCAGAACTGTACTTGAACTTCTGAGTGCATGTTTACACTGAGTGTGCACGTGCCTCATAACAGACCAAATTGTGACCTCAATATGAAATGGAGGTTGAGACCAGAAATGAACTGTAATTAAGTATACAGCAATAAAATGAGCTGAGTCTGGAACACTGGTTTCATCTGTGTTGTCAGTAGAAATTATAGAGCGCTTCTGTGATCAGTTTTAAAAGTAGATGAAGGTGGTGTTTTCTTGTGTGGCCGTGTGTGTGGTGTCATATGAACATTGTTGCTGTTAACAGAATCAGTTTTTTTACATCTCTCAGTACGcgtaattttaaatatttcaaatgtatgCATTGTTACATTACGGAAATTACACAACTTTCTCCTTAAATCTTTTATCATTAATGCTGTTACCAATTCATAAGTCAGCACTATAACTAACCGTCATAGACTTTAGGATGAAATATCCCCAATATCATTTGTTTTCAACAAGTGATTAAACATTTTGTTCTTCTAATACAGAATATTTagcatctttgtttttttttcagagtatacttacttacttatttagggtaacttactcccagggccatttatagcAAAGTtgatacccacatagcaaaatttctctggcccagctctggcccacacaatcaggttttgcttggcccacatgccgctgtGAATTACGGTagatgactggaccaaatctggcttccagacaagggccaaacacagaccatatctgggccaagtctcaaccaagttaataactcatagctgggcctgaactgggccagaaaggttggtgtgtcacgattgcaatgaaattaataaacctaTAAAGCGttgtgctttaggcacactatgggccttgttttttctcagtgacctgattggtagaattgatttatttaatcaaaaattatttttatgtattttaaatgtgggtcaagactggccaaactcacgtggcccacaatcaatttttaaaatctgggccaaatactacgttttacatctggcccaaatcttgtgtgccgcattatagacggtgccacctctgccaaacccaggccatggttggcccacatgctgtatgccagtgccggatgaatgcctgatgtcccagctttatgccaaatctgggccagaattctttgctactagggtattTAGCCGCACTAACAAATCCCCTCAAGTAGTTCTAATCCTCTCCATGTCCACCTTTGCTTGATTCTACCATCTTTGTTTTGGTTATCCACAGGGTCATCTTACTTCCAGATTAGATTTCATCACCTTCTTCAATTGACATAATTTTCTCCTGAGTACATGTCCAGCTTTTCGGATCCTTCTACACTTTATTTCACGTATGTCTGCGCTATTGTAGAGGtccctgatctctctctattgtGTTACTTCTCCATTCTCATTTTTTGCAAGTATGCCTGTATATCTTTTTTTCTACTTTATTTTCAAACACTATacgctttttcttttctttctttcttagttTCCATGTCTCAGATCCATACAGTAATACTGGGCAGTTTATTGATTTGTACattcttaatttttgttttgtgtgacaAGGATTTTGATGAGAGCATTCTGTTGCATGCATACAGACATTTATTTGCTGAGTTTAACCTACTTTGTATCTCTGGTTTATCTGTATTCTGATTGGATACGATTACTCCAAGATATATTTTAATTCGCTGACTTGTTCAAACTAGTGTCCATCAATTTTTAACGCTCCTCTTCTTTGATTCTGGTTTTGTGTAAATTTTTGTACTTGGTGTTTGTCTCATTTGACCAATCTTTTCTCTCATCAAAAGTTTAGTTAGGGTGTTAAAATCTTCCAGATTTTCTGTGATTATCACTATATTATTGATGAAAgctagtgtatttattttgtcacTGATTTTAACATCTCTGCTACTTTCTGAAGGGCTTTTTTATGGCAATGTTAAATAACTCCTGCCTGAGTTTACCCTAAAGGGCTCACAGTAATGTTTTTCAgagtaaataacaaacaaaaaattatctCTATATTAATCTCCTTTTAATGCACAATTTTTAATAGAGCCATTTGAAATTCATCTGAAAGAAATACCTGTTGTGATTGTAGCAGTTTATGCCAACTTTTTCATCaattaaaccaggggtgtcaaactcaatccctggagggccgaagccctgcacagtttagttccaaccctgctccaacacacttacctgtaggttttaaacaagcctgaaggactcaattagtttgatcaggtgtgtttaattagggttggaactaaactgtgcagagctgcggcccttttggaaccgagtttgacacctgtgaattaaaccaataattattttaaattctctACATTTTAGAAAGATGAAATAATGAGTCATTGATTCTTAGCCACTGCATGTACTGTAATATGCTGTATTTTTCTGTCTAATCATATTTCTCCCATTCTCCATCACCAATCCAGACTTCATTCACCCCATTGGTAAGCTcctagaccattttgagggatgtaaacaataacgaTGGTCCTAacttatttcctgttttacattttttaactttcACAGcatccgagaatccaaaaagctCCACATTTTGCTAAATAATGTTGTGATAGCTGTTTTATTGTCAAGTCATgactgaattgcctcttgttatagttatgaaatagtttgacaacaaactGGAAATGTGCATGGGTCAATGACATCGCAACATTCAAATGGTCTTTagcaaaaaaaacaattatttgaaTAGATGATGATTTCAGCTATAGCATCAGGTCTGTTTATAGTGTTGGAGGACGGACACCTCAGATTCTAGAGaacatttgattggacagaaaatCTGATGTGAAGCTGAATTGCAGCATGATGTCATCGGAATCAGTGATCACTGCTGGCTGAAGTGAGTGAATATGTTTTGAATGCATTTTAGaattaactattaactattattgtTTATTGCTAATGAGATTGAAgctagttttaattttaattatgaaagGCAAACCTCTTATTGTACTTTTtgtctgatttattttttgttgagaaaaaaaggtggcgtggtggctcagtgattaacactgtcgcctcgcagcaagaaggtcgctggtttgagccccggctgggtcatttggcatgtggagtttgcatgttctcgtgttggtgtgggttccatccaggtgctctggttttccgcacagtccaaatacatgcacaaaaggtaaattgaataagctaaattggccgtagtgtttgtgtgtgagtgcaagagtgtatgggtgctccccagtgctggaaggacatccgctgtgtaaaacatacgctgtggtgacccctgataaataaagggaataagccgaaggaaaatgaataaataag
>TCONS_00029253
CGAGAAAGGAGGTCAAATTAATCGTTTGTCCATACTGAGATAATTTTAAAGTATCTATTATTTAAAGTGCACCAATACTTTAGTGTGATTTAGATCACACACGTAGATCGTTAAATTATaaagcacaaaataaaataaaatgcatatactTCCGTCCCATTACTTCTGCGCAGCTTCCTGTAGGACTGCCTGAAACTTTATTGAAACTGGAGAACTGCTGAGTGACATGGACAAAATAGATTTGCCCCCAGTGGGTCCTGATGACTTGCCCCTGTCTCTGCTGGAGATGGGCTGTTCTGGGAGATTTGagctcatcacacacacactgcccaaAAACAAACCCCTGCCTCCGCACAGCActCTCCCACATGGACTGCCTCCTACTTGTCTGGATTTAAAGACAGAGGTAGAAAAGCGTTTTCTGCGAGATCCTGCTTGGCTCCCGGTACATGATGTAGATGATGCCTTCAACAAGTTCCTTAAGATAAGTAAGAGAGAAAAAGAAGTGGACTCTCTCCTGCACTGCTCTCTGTCTCAACTGCATTCTGGTCTGTCTGTGGTCAGAGATCCAACCACCGGCATGCTGCTGGATTTCACTGAGGTGTTGTTAGAGGACACAGGTTTGTCTGCAAAAAATTCACTCTCGTTACAAAGACAGCCTGGACCTCCGTCAGAGAGTCTGCGAGGGAGCAACACAAACTATCCATTTCTGCCAGCTGGAATGGAAGAACTGACTTTAGAGCAGATCAAAAACAAGTCAGAGCTGGAAGAAGACATTGACTTTGAGAAAGATTTGATGACAGTTCCTCCTGGGCTGAAGGCTGGTATGGACTTCAGTGACAAAGAAGCCAGAAACACGAAGAGTGAGGTGAACCTGCTGTCGCTTCTGTCTACTTTTGATGATGTCCTTGATGCTCCGCCAGAGGACAAAGAGGGAGTCTCACAAAAAGAGGAGATCGTTAAACTTCCCAGAACTAACAGCCTGGAGGATCTGGGCATTAAAGATTCGGGCAGCTCGCAGCCTCAAGGGAACACAGGCAGTCTGACtgaacaaaagaagaaaaacctGGAAGAAGAAAAGGGAGACAATAAAAAATGGGCCATTCCGGTGGACATCAGCTCACCGTGTGCTGACTTCTACAAACGGATCCCTGATCCAGCGTTTAAGTATCCCTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATTCTCCGTCTGGAAGCTCATGACTCTGTCTTTGTTGCGGCTCACACCTCAGCCGGCAAGACTGTGGTGGCTGAATACGCAATTGCACTTTCCCAGAAACACATGACCAGGACCATTTACACCTCCCCCATTAAGGCCTTGTCCAATCAGAAGTTCCGAGACTTCAAGAACACATTCGGTGATGTGGGACTTTTGACTGGAGACGTGCAACTGAACCCAGAAGGCTCATGTCTCATTATGACCACTGAGATTTTGAGATCGATGCTCTACAATGGCTCGGAGGTCATCAGAGATCTAGAATGGGTCATTTTTGATGAGGTTCACTATATCAATGATGCAGAGagAGGAGTGGTGTGGGAGGAAGTGCTTATCATGTTGCCGGAGCATGTTAGCATCATCCTGCTCAGTGCCACAGTGCCAAACGCAGTGGAGTTCAGTGAATGGatcggGCGCATCAAGAAGCGACATATTTACGTGATCAGCACAATTAAGAGGCCTGTTCCTCTAGAGCACTATCTCTACACAGGCAACAGCACCAAGACTCAGAAAGAGCTCTTCATGTTGCTGGACGCAACTGGAAACTTTCTTACTAAAGGctacTACGCTGCAGTGGAAGCCAAGAAGGAGCGCACTAGTAAACATGCACAGTCTTTTGGCACAAAGAACGTATCGCAGCACAACACAACAGCCAGTCAGGATCGTGCGGTGTGGCAAACGCTGTTAAATTATCTGTCTCAGAGGCAGCAGACTCCAGTGGTGGCATTTACATTCTCTAGGACACGATGTGATGAAAACGCTCGCTCTTTGACCTCTCTGGACCTCACCACATCCATAGAGAAGAGCGAGATCCACTCCTTCCTGCAGAAGAGCCTGACCAGACTGAGAGGAGGAGATCGACAGCTACCACAGATCCTGCTGATGCGTGATTTGTTGAAGAGAGGGATTGGTGTTCATCACAGCGGCATCCTGCCAATCCTGAAGGAAGTCATTGAAATGCTCTTCTCCAGAGGTTTAGTGAAGGTTCTGTTTGCTACAGAGACTTTTGCCATGGGTGTGAACATGCCTGCCAGAACTGTTGTGTTTGACAGCATCCGCAAACACGACGGCACGGGATTCAGAAATCTGCTGCCCGgcgAGTACATTCAGATGGCGGGTCGTGCCGGCAGAAGAGGTTTGGATGCCACAGGAACTGTTATCATCCTCTGTAAAGCTGGAGTTCATGATATGGGAGAACTCCACTCAATGATGCTGGGGAAGCCGACGGTGCTGCACTCTCAGTTCAGACTGACCTACACCATGATTCTGAATCTGCTGCGTGTGGAGGCCCTGAGGGTCACCGACATGATGAAGAGAAGCTTCTCTGAAAACCACAGGGATACACAGGCTCACGAGAAGAGAATAAGTGAGCTGAGAAACACGCTGTCTTCTCTTCCTCCGCTGGACACGGAGGGGCAGTTGTCTGATTTACTGTCATATTACCACACAATCACAGAGCTGCACATCACCACACAGAGCCTGCAGCAAGCTGTTCTGGAGTCAGTCAATGGTCTCAAAGCTCTGTCTGTTGGAAGGGTGGTGATCGTGAACAACAGCCAGCATCACAACTCTCTGGGAGTCATTCTACAGGTGTCCAGCGATGCAGTAAATCGCACCTTCACCGCTCTCATTATCTGTGAGAAGGGTAACGAGGAGGCGGCCAGTGATGAGCAATCTAATAAAGTTGCACTTCCCATCTATAGCAAAACATTGTTTATTCCTGAggGACCCTGCAGTCATACTGTGCAGAAACTGAAGTTGCAGGACATTTCTGCTATTACAACCAAAGCACTCAAGGTCATACCAGAGAGAATCATCGACAACTACAACAAAAGACTACAGCCACGCTTCAGGCTTGATCCACCAGGTCAAGCTATCTCTACAGCAACCCAGGAGCTCCTTCGATTGGCTGAGGCAAATATGGGTGGCATGACCGTCCTTGACCCAGTGAATGACCTTCACCTAAAGGGTGTTGATGTGGTGGAGGGTGTGATGAGGCAGCGAGTGTTACAGGACTCTCTAAAAGACTTCCACTGTATCCACTCACCCACCTTCTCTGAACAGTTTACACGTGTGCAGGAGAGGATGAGTGTACAGGAAGAGCTTGATAAGCTTCTGTTCCTGGTGTCTGATCAGTCATTGACACTTCTGCCTGAGTACCATCAGAGAATCAAGGTGCTGGAAGCGCTGCAGTATGTGGACAGCAGTGGTGCGGTTCAGCTGAAGGGTCGTGTGGCATGTCAGATCAGCAGTCATGAGCTCTTACTGACTGAACTCCTGTTTGAGAACACTTTGAGTCCTCTGGCCCCTGAGGAGAGCGCCGCCCTGCTGTCCTGCCTCGTCTTCACACAGAACACCCAGATAGAGCCACATATCACCAACACACTGCAGGAGGGAATCAATCAAGTTCTCGCTGTAGCCCAGCGTATCGGTGACCTGCAGAGGGATTGTGGGATTGCTCAGACCGCTGAAGACTTCGTGGCCCAGTTCAAGTTTGGCCTGACTGAGGTTGTGTACTGCTGGGCAAGAGGAATGCCATTTGCTGAGATAGCCCAGCTGACAGATGTGCAGGAGGGAACAATCGTGCGCTGTATCCAGAGGCTGGACGAGGTCCTGAAGGAAGTCCGACAGGCTGCTCGCATTGTGGGTGACTCTGTCCTGGGCAGTAAGATGGAAAGAGCCTCTCTGGCCATACGCAGAGACATTGTGTTCACCGCCTCGCTCTACACACACTGAagcagacagacacaaacacactgttTGGAGTGGGGTATAATTATAGTGTACAGAACATGGACCTTCAGAACTGTACTTGAACTTCTGAGTGCATGTTTACACTGAGTGTGCACGTGCCTCATAACAGACCAAATTGTGACCTCAATATGAAATGGAGGTTGAGACCAGAAATGAACTGTAATTAAGTATACAGCAATAAAATGAGCTGAGTCTGG
>TCONS_00029254
AAAATGGGCCATTCCGGTGGACATCAGCTCACCGTGTGCTGACTTCTACAAACGGATCCCTGATCCAGCGTTTAAGATATTGTGCAAAGCTGGTGCACATGATTTTTGTCAGTTTGTTAaaatttatgcttgtttttgGTCTATTCTTGCTTCCTATCAGTATCCCTTTGAGCTGGACGTGTTTCAGAAGCAGGCTATTCTCCGTCTGGAAGCTCATGACTCTGTCTTTGTTGCGGCTCACACCTCAGCCGGCAAGACTGTGGTGGCTGAATACGCAATTGCACTTTCCCAGAAACACATGACCAGGACCATTTACACCTCCCCCATTAAGGCCTTGTCCAATCAGAAGTTCCGAGACTTCAAGAACACATTCGGTGATGTGGGACTTTTGACTGGAGACGTGCAACTGAACCCAGAAGGCTCATGTCTCATTATGACCACTGAGATTTTGAGATCGATGCTCTACAATGGCTCGGAGGTCATCAGAGATCTAGAATGGGTCATTTTTGATGAGGTTCACTATATCAATGATGCAGAGagAGGAGTGGTGTGGGAGGAAGTGCTTATCATGTTGCCGGAGCATGTTAGCATCATCCTGCTCAGTGCCACAGTGCCAAACGCAGTGGAGTTCAGTGAATGGatcggGCGCATCAAGAAGCGACATATTTACGTGATCAGCACAATTAAGAGGCCTGTTCCTCTAGAGCACTATCTCTACACAGGCAACAGCACCAAGACTCAGAAAGAGCTCTTCATGTTGCTGGACGCAACTGGAAACTTTCTTACTAA

Function

symbol description
skiv2l Predicted to enable RNA helicase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay. Predicted to be part of Ski complex. Human ortholog(s) of this gene implicated in trichohepatoenteric syndrome 2. Orthologous to human SKIV2L (Ski2 like RNA helicase).

GO:

id name namespace
GO:0006401 RNA catabolic process biological_process
GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay biological_process
GO:0055087 Ski complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003724 RNA helicase activity molecular_function

KEGG:

id description
ko03018 RNA degradation
ko03019 Messenger RNA biogenesis

ZFIN:

id description
ZDB-GENE-010430-5 Predicted to enable RNA helicase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay. Predicted to be part of Ski complex. Human ortholog(s) of this gene implicated in trichohepatoenteric syndrome 2. Orthologous to human SKIV2L (Ski2 like RNA helicase).

Ensembl:

ensembl_id ENSDARG00000062206

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029252 False 8216 mRNA 0.42 28 26869428 26923957
TCONS_00029253 False 4191 mRNA 0.49 29 26872685 26923273
TCONS_00029254 True 789 lncRNA 0.47 6 26913424 26917550

Neighbor

gene id symbol gene type direction distance location
XLOC_014825 prrt1 coding downstream 325 26858039 ~ 26869103 (-)
XLOC_014824 FP085398.2 coding downstream 32304 26828181 ~ 26837124 (-)
XLOC_014823 neu1 coding downstream 45719 26810208 ~ 26823709 (-)
XLOC_014822 NA coding downstream 62209 26803869 ~ 26807219 (-)
XLOC_014821 NA coding downstream 81148 26786900 ~ 26788280 (-)
XLOC_014827 zbtb12.1 coding upstream 13586 26937543 ~ 26943936 (-)
XLOC_014828 zbtb12.2 coding upstream 33468 26957425 ~ 26964348 (-)
XLOC_014829 sacm1la coding upstream 43400 26967357 ~ 27006764 (-)
XLOC_014830 gabbr1b coding upstream 116576 27040533 ~ 27261102 (-)
XLOC_014831 BX539323.1 coding upstream 248757 27172714 ~ 27172830 (-)
XLOC_014711 CR382300.3 misc downstream 7140673 19728690 ~ 19728755 (-)
XLOC_014820 NA non-coding downstream 88730 26779546 ~ 26780698 (-)
XLOC_014813 BX842688.1 non-coding downstream 1350888 25518420 ~ 25518540 (-)
XLOC_014835 NA non-coding upstream 529595 27453552 ~ 27463611 (-)
XLOC_014836 NA non-coding upstream 539973 27463930 ~ 27470389 (-)
XLOC_014839 NA non-coding upstream 647749 27571706 ~ 27575094 (-)
XLOC_014841 BX548075.1 non-coding upstream 657793 27581750 ~ 27584737 (-)

Expression


Co-expression Network