XLOC_014840 (si:dkeyp-46h3.3)


Basic Information

Item Value
gene id XLOC_014840
gene name si:dkeyp-46h3.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 27577099 ~ 27579835 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029300
ATgaatttattaaatgtgtttttttttctccatgtagCATATGGTGTGCTTCAGATAACCGCTGCAAACTATGGACGTACTAATAGACGTGACTGCTCTGGAAGTCGTCCAGTCCTTCCCCAAAACACAAACTGCATTTTCAACGCGCTGGCTCCTGTTTCACAAAGCTGCAATGGGCTGCGAAGTTGTGAGCTTTTTGCTACAACTGATATCTTCACTGATCCCTGCCCTGACATGCGCTCTTATCTTTCCGTCACCTACTACTGCCTCCCACCTGAAATCCGTTCAAGTGCAGTCTGTGAAAATGCCATTGCTAACTTCAAATGtgAGGATGGATCTCTCATACACATTCATGCTGCTAACTACGGGCGAACTGATagcagcacatgtgctgctgGACGACCTGCTTCCCAAACTGCCAAAACCAACTGCTATGCCTCAAATTCACAGACACTTGTTGCTAATGCGTGTGAAGGGAAGAACAGCTGCTCCATTTCAGCCTCCAACGGTGTCTTCTCAGATCCGTGTTATGGCACATACAAGTACCTGTACACCGCATACTCCTGCGTACCTCAGTtttaTTGGAGCTGATCTTGAAGATTTTTAGCACCTCTAAATAGCTGCATATAAGTGTCTAAGCATTTCTGTAACAATGGCTTAATTGTTAACCTAATTTTTGACATCTTAAGCAAAATGTTTACCATGAGATTGCATAACTGTATATCATTAGTTTACTAAGCTGTATTCAGCCTTTTGTGCAGGTGTCTTGTACGATTATCATCCTTATGCTCTGGGAAGTTGTGTTCAATAAACCCTTTTAAAAGAAATCATGTGTTGCTCTGGTTCTTGGAGTCATGCTCCCTTTTGCCTCATTTTTTCAGGGGTTCTTAAAGTAGatcctgcagatttttagctaACTTCCTATAACACTCATGCAAGGATGTTTATAGAAAGCGTAgtaggcttttctttttttttttttttttttttttgttaccccaggtgtgtctgattttggctggagctaaaatctgcaggtctCTGTCCTTCAGCACAGAGATTAAGAACACTATGGTATGGCTCTTTTACAGAAGAGCGTATGTGATTTTAATGTCAG
>TCONS_00029301
ACAGCACCTTGTACTGTTGATGGTGATATCAGAACTATGGTTTCTCTCAGGGTCTTTCTCAGCtTGCTTATGGGCTGTAGCCTGTCTGCAGGTGTTACATTAAATCTAGCCCCTCTAGATGTTGACTTGTCACCACGAACTAAAAGGATAGAGATTTGTAATGGTGACCGTGCGGTATTGAAATGCGCATATGGTGTGCTTCAGATAACCGCTGCAAACTATGGACGTACTAATAGACGTGACTGCTCTGGAAGTCGTCCAGTCCTTCCCCAAAACACAAACTGCATTTTCAACGCGCTGGCTCCTGTTTCACAAAGCTGCAATGGGCTGCGAAGTTGTGAGCTTTTTGCTACAACTGATATCTTCACTGATCCCTGCCCTGACATGCGCTCTTATCTTTCCGTCACCTACTACTGCCTCCCACCTGAAATCCGTTCAAGTGCAGTCTGTGAAAATGCCATTGCTAACTTCAAATGtgAGGATGGATCTCTCATACACATTCATGCTGCTAACTACGGGCGAACTGATagcagcacatgtgctgctgGACGACCTGCTTCCCAAACTGCCAAAACCAACTGCTATGCCTCAAATTCACAGACACTTGTTGCTAATGCGTGTGAAGGGAAGAACAGCTGCTCCATTTCAGCCTCCAACGGTGTCTTCTCAGATCCGTGTTATGGCACATACAAGTACCTGTACACCGCATACTCCTGCGTACCTCAGTtttaTTGGAGCTGATCTTGAAGATTTTTAGCACCTCTAAATAGCTGCATATAAGTGTCTAAGCATTTCTGTAACAATGGCTTAATTGTTAACCTAATTTTTGACATCTTAAGCAAAATGTTTACCATGAGATTGCATAACTGTATATCATTAGTTTACTAAGCTGTATTCAGCCTTTTGTGCAGGTGTCTTGTACGATTATCATCCTTATGCTCTGGGAAGTTGTGTTCAATAAACCCTTTTAAAAGAAA
>TCONS_00029302
AGAACTATGGTTTCTCTCAGGGTCTTTCTCAGCtCATCAAAATTCACTTTGCCACTTCTGGGTTTTTGTGCCAATAAAGGATAGAGATTTGTAATGGTGACCGTGCGGTATTGAAATGCGCATATGGTGTGCTTCAGATAACCGCTGCAAACTATGGACGTACTAATAGACGTGACTGCTCTGGAAGTCGTCCAGTCCTTCCCCAAAACACAAACTGCATTTTCAACGCGCTGGCTCCTGTTTCACAAAGCTGCAATGGGCTGCGAAGTTGTGAGCTTTTTGCTACAACTGATATCTTCACTGATCCCTGCCCTGACATGCGCTCTTATCTTTCCGTCACCTACTACTGCCTCCCACCTGAAATCCGTTCAAGTGCAGTCTGTGAAAATGCCATTGCTAACTTCAAATGtgAGGATGGATCTCTCATACACATTCATGCTGCTAACTACGGGCGAACTGATagcagcacatgtgctgctgGACGACCTGCTTCCCAAACTGCCAAAACCAACTGCTATGCCTCAAATTCACAGACACTTGTTGCTAATGC

Function

symbol description
si:dkeyp-46h3.3 Predicted to enable carbohydrate binding activity.

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-748 Predicted to enable carbohydrate binding activity.

Ensembl:

ensembl_id ENSDARG00000092887

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029300 False 1117 mRNA 0.41 6 27577099 27578929
TCONS_00029301 False 977 mRNA 0.44 9 27577389 27579835
TCONS_00029302 True 550 mRNA 0.46 7 27577941 27579805

Neighbor

gene id symbol gene type direction distance location
XLOC_014839 NA coding downstream 2005 27571706 ~ 27575094 (-)
XLOC_014838 si:dkeyp-46h3.8 coding downstream 6736 27546401 ~ 27570363 (-)
XLOC_014837 si:ch211-152p11.4 coding downstream 34666 27522425 ~ 27542433 (-)
XLOC_014836 NA coding downstream 106710 27463930 ~ 27470389 (-)
XLOC_014835 NA coding downstream 113488 27453552 ~ 27463611 (-)
XLOC_014841 BX548075.1 coding upstream 1915 27581750 ~ 27584737 (-)
XLOC_014842 si:dkeyp-46h3.2 coding upstream 6988 27586823 ~ 27588842 (-)
XLOC_014843 BX548075.2 coding upstream 9500 27589335 ~ 27605740 (-)
XLOC_014844 adcy2b coding upstream 29092 27608927 ~ 27777228 (-)
XLOC_014845 NA coding upstream 221220 27801055 ~ 27802557 (-)
XLOC_014711 CR382300.3 misc downstream 7848344 19728690 ~ 19728755 (-)
XLOC_014831 BX539323.1 non-coding downstream 404269 27172714 ~ 27172830 (-)
XLOC_014824 FP085398.2 non-coding downstream 739975 26828181 ~ 26837124 (-)
XLOC_014850 NA non-coding upstream 658086 28237921 ~ 28239057 (-)
XLOC_014853 CR391974.1 non-coding upstream 862006 28441841 ~ 28441960 (-)

Expression


Co-expression Network