XLOC_014854


Basic Information

Item Value
gene id XLOC_014854
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 28493973 ~ 28789409 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030258
CAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTATTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030259
CAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030257
CAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTAATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030260
AGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTATTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGAATAGCCCCTCTGTAGGTTAAAAGGCCTTGCCAATCCAGTCATGGGGGATCCATTGCCTAAGACCTGCGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030261
TGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGAATAGCCCCTCTGTAGGTTAAAAGGCCTTGCCAATCCAGTCATGGGGGATCCATTGCCTAAGACCTGCGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030263
GTGGGGTCATGCGTGAAAGGGGCGTGGTCAGACGAGCCGTCTAAGCACGTGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTTTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGAATAGCCCCTCTGTAGGTTAAAAGGCCTTGCCAATCCAGTCATGGGGGATCCATTGCCTAAGACCTGCGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030262
GTGGGGTCATGCGTGAAAGGGGCGTGGTCAGACGAGCCGTCTAAGCACGTGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTTTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGCAGATCCGGAGGGAAAGAGAGAGGAGAGAACGAGGAGACGCATCAGGATACCAGCCCGCCTGGAGCTGCACCCAAACATCAAGGGAGTCTGGAATAGCCCCTCTGTAGGTTAAAAGGCCTTGCCAATCCAGTCATGGGGGATCCATTGCCTAAGACCTGCGGTTTCAGCAGCCAGCCAAATTTTCCATCAATTTCCATACATATATTGTTGCGTAAACAGAAGCAAGCGGTCCAGAGCACTCCTTCCAGAGCCGGCAAAATGCAGAGACCCTGATGAAGACAGATCCTATCGTTAACTCTGCACACACAGAGGGCCCCATGGGGAACCGTGTAAATGCTACTAGCCTTTTCTCCTAATGTAGGTGTCTCTGTTATAGATTGTTTGCCATTTTGAAAAATATGCAACCCTGTGTTTCACcattttttacttcttttcttgAGGTGCACCAACGCTATGCATGTTTGCGACACTAAGAATATACTCAGTCATTATGCTAATACTCACTGCTTGAGACTTTTACATTTTAGCGGTTATACTCATGCATGTCAGATTCAGTTTTATTTGACTAAGCTTGGTTGAGCTTTTTTGTTGATGCATAAAATGGGACAATCCTATAGTACTTtgaatactgtaaaaataaactgTCACATTATTGAAAG
>TCONS_00030264
GGTCATGCGTGAAAGGGGCGTGGTCAGACGAGCCGTCTAAGCACGTGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTCCTTCAGCGTGGGAACCGCACATAACTGATGGCCGAGTGTGGAGGATAGTCGTGTTCTGGTTCTGAATGATACCTCTGGGCTAAAGCGGGAAAGCGTGGACATATCTCTCCATCTGCTTCCCTGTGACATCAAAGGAAAAGCCTTGGATTCTACGGCCTATATATAAAACCTGCAGGAAGACATGTGTTATTCTGGCTCTCTTCCTGTAACCTAAGGCTGATCTCGAACACTCTTTTTCTCATTCTCTCTCACTTTGTCTGCTTTGTGCTGAAGTGGACACTCTTATGACTAAGTGTTGTCATTTTATGTGCTTCTTTCATGTTATACAGTcttcttaaagtgatagttcacccaaaaattcttTCTTCATTTACTCATCTTCTACTTCTGCTCAaccggtttgagtttctttcttctgtcaaatgccAATAATGAAGATATTAAAGAATGCTGGTAAGAAGCAGCCACTGACATTTTGGTTTCTACTGTGAATGTCAGTGCTGCTGGTTTGCAATATTGTTCAGAGTATGTACAGTACTAAATAGTAAGGGAGTTTTTTATTTTAGGATGAACTTCTGGATTAACCTTTTATTTTTGGATCTTGGGGTTAAAAGTACAGCTACCTAAAAAGGAAaatcctgttgttgttttttttcacccACATGCCATAAACAGAAAAATACACACAgagaaaattacatttgctgcTTATTTTAATTACAGTTTGAAAATGTTCAGTATTTTTGTTCATTATTGTTCAGTCGGcttaaatgtgtataaaaaaagtCTGTAAGAGCCATAGTTTGATTTAATACAACTTATTATTAGTGCTCTTATTCATGTACAGTTTAcacttgtttacatgtttacttGTGTGAATTTGTTGATTTCTCCCTATTCTTTTGGTTGAAACGGTTTGctgtattatgtattattattaagttttattatgatatagaaaaatgaaagaaacaagaccGGAGTTTATTGTCATGCTGTTTGAAAATTCAGTAAACATCTTTAAATGGAAAGAAACCCAATTCAATTTATTGTCGGACTGATTTTGAAATTTTGAGTTTAAATAGtccttattttatgttatttattaaattatttttgttgataTTACTAACTGAGTAGTAAATTTATAATTTCCTTCCCAGCATAATTTTTACTAAGTAAAGGGTTAGACCTATTTAATctccatttattttaaatatatggaaGAGTTTCAATTGAAGTTTTGAGTTCGGAGGTTATTCCTatgcaataattattgtttcttCACTCAACAATTCATTTGTTATTACCAGTTTGAGATCAGTCTCTTTTTACTTGTTCAATCCATATGTTATATAtggaacaaaataataattttaaactgtAATTTTGTTTGTCGAAATTAGATGATTAAGATGACTAAAtttgctaaataattcaaataaaagtgATGAAATCTTGTTGGTTCAGAA
>TCONS_00029321
GGTCATGCGTGAAAGGGGCGTGGTCAGACGAGCCGTCTAAGCACGTGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTATTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGCCTTCAGCGTGGGAACCGCACATAACTGATGGCCGAGTGTGGAGGATAGTCGTGTTCTGGTTCTGAATGATACCTCTGGGCTAAAGCGGGAAAGCGTGGACATATCTCTCCATCTGCTTCCCTGTGACATCAAAGGAAAAGCCTTGGATTCTACGGCCTATATATAAAACCTGCAGGAAGACATGTGTTATTCTGGCTCTCTTCCTGTAACCTAAGGCTGATCTCGAACACTCTTTTTCTCATTCTCTCTCACTTTGTCTGCTTTGTGCTGAAGTGGACACTCTTATGACTAAGTGTTGTCATTTTATGTGCTTCTTTCATGTTATACAGTcttcttaaagtgatagttcacccaaaaattcttTCTTCATTTACTCATCTTCTACTTCTGCTCAaccggtttgagtttctttcttctgtcaaatgccAATAATGAAGATATTAAAGAATGCTGGTAAGAAGCAGCCACTGACATTTTGGTTTCTACTGTGAATGTCAGTGCTGCTGGTTTGCAATATTGTTCAGAGTATGTACAGTACTAAATAGTAAGGGAGTTTTTTATTTTAGGATGAACTTCTGGATTAACCTTTTATTTTTGGATCTTGGGGTTAAAAGTACAGCTACCTAAAAAGGAAaatcctgttgttgttttttttcacccACATGCCATAAACAGAAAAATACACACAgagaaaattacatttgctgcTTATTTTAATTACAGTTTGAAAATGTTCAGTATTTTTGTTCATTATTGTTCAGTCGGcttaaatgtgtataaaaaaagtCTGTAAGAGCCATAGTTTGATTTAATACAACTTATTATTAGTGCTCTTATTCATGTACAGTTTAcacttgtttacatgtttacttGTGTGAATTTGTTGATTTCTCCCTATTCTTTTGGTTGAAACGGTTTGctgtattatgtattattattaagttttattatgatatagaaaaatgaaagaaacaagaccGGAGTTTATTGTCATGCTGTTTGAAAATTCAGTAAACATCTTTAAATGGAAAGAAACCCAATTCAATTTATTGTCGGACTGATTTTGAAATTTTGAGTTTAAATAGtccttattttatgttatttattaaattatttttgttgataTTACTAACTGAGTAGTAAATTTATAATTTCCTTCCCAGCATAATTTTTACTAAGTAAAGGGTTAGACCTATTTAATctccatttattttaaatatatggaaGAGTTTCAATTGAAGTTTTGAGTTCGGAGGTTATTCCTatgcaataattattgtttcttCACTCAACAATTCATTTGTTATTACCAGTTTGAGATCAGTCTCTTTTTACTTGTTCAATCCATATGTTATATAtggaacaaaataataattttaaactgtAATTTTGTTTGTCGAAATTAGATGATTAAGATGACTAAAtttgctaaataattcaaataaaagtgATGAAATCTTGTTGGTTCAGAA
>TCONS_00029322
GTGGGGTCATGCGTGAAAGGGGCGTGGTCAGACGAGCCGTCTAAGCACGTGTAGACAAAGCGCATCATCAATACAACCAAACATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTACTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTTTGGAGTTCAGCAGCAAAGAGCATCAGGAAGCATTACCACATCACTCACAGTTCAGCTCTCCGGCAATGCCCTGACCTCCTGAACCCTGACCTTAAATGACCTCTCTTCGTACTCTCGGTTTAACTAGCTCAGCGGCTCTCAGTATCAGCCTTCAGCGTGGGAACCGCACATAACTGATGGCCGAGTGTGGAGGATAGTCGTGTTCTGGTTCTGAATGATACCTCTGGGCTAAAGCGGGAAAGCGTGGACATATCTCTCCATCTGCTTCCCTGTGACATCAAAGGAAAAGCCTTGGATTCTACGGCCTATATATAAAACCTGCAGGAAGACATGTGTTATTCTGGCTCTCTTCCTGTAACCTAAGGCTGATCTCGAACACTCTTTTTCTCATTCTCTCTCACTTTGTCTGCTTTGTGCTGAAGTGGACACTCTTATGACTAAGTGTTGTCATTTTATGTGCTTCTTTCATGTTATACAGTcttcttaaagtgatagttcacccaaaaattcttTCTTCATTTACTCATCTTCTACTTCTGCTCAaccggtttgagtttctttcttctgtcaaatgccAATAATGAAGATATTAAAGAATGCTGGTAAGAAGCAGCCACTGACATTTTGGTTTCTACTGTGAATGTCAGTGCTGCTGGTTTGCAATATTGTTCAGAGTATGTACAGTACTAAATAGTAAGGGAGTTTTTTATTTTAGGATGAACTTCTGGATTAACCTTTTATTTTTGGATCTTGGGGTTAAAAGTACAGCTACCTAAAAAGGAAaatcctgttgttgttttttttcacccACATGCCATAAACAGAAAAATACACACAgagaaaattacatttgctgcTTATTTTAATTACAGTTTGAAAATGTTCAGTATTTTTGTTCATTATTGTTCAGTCGGcttaaatgtgtataaaaaaagtCTGTAAGAGCCATAGTTTGATTTAATACAACTTATTATTAGTGCTCTTATTCATGTACAGTTTAcacttgtttacatgtttacttGTGTGAATTTGTTGATTTCTCCCTATTCTTTTGGTTGAAACGGTTTGctgtattatgtattattattaagttttattatgatatagaaaaatgaaagaaacaagaccGGAGTTTATTGTCATGCTGTTTGAAAATTCAGTAAACATCTTTAAATGGAAAGAAACCCAATTCAATTTATTGTCGGACTGATTTTGAAATTTTGAGTTTAAATAGtccttattttatgttatttattaaattatttttgttgataTTACTAACTGAGTAGTAAATTTATAATTTCCTTCCCAGCATAATTTTTACTAAGTAAAGGGTTAGACCTATTTAATctccatttattttaaatatatggaaGAGTTTCAATTGAAGTTTTGAGTTCGGAGGTTATTCCTatgcaataattattgtttcttCACTCAACAATTCATTTGTTATTACCAGTTTGAGATCAGTCTCTTTTTACTTGTTCAATCCATATGTTATATAtggaacaaaataataattttaaactgtAATTTTGTTTGTCGAAATTAGATGATTAAGATGACTAAAtttgctaaataattcaaataaaagtgATGAAATCTTGTTGGTTCAGAA
>TCONS_00029323
ATCCGAACGCGGAAAGTTTTGCGCTTATGGATTATAACGACAAAACGGGATTGCCTCTCAGTGGACCTCCACACGTGTTTGACAAAACTCTCCGAAGATGACATCCTGACGTAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTGACAGACCGATGACTCCGGCCTCTCTTTAACCAGGCTTGTGGAGAAACTGGACCTGGCTCCCTCTGAAGTAGTGAGTAATCAAGGCCGACGGCCGAGTGCCATGCTTTTCCCACACTTGTGAGGCAGCGTAACCTGTCATGCTGACCTTGTTGCTTAACTATGCTTTCAGCTTGATGTCCAAATTATCTCGGCACAATGCTGCCAAGTCATTTTGCTGGTTTGCACACAACTCTGCACCTAGTGGTCACTGTGAGTAGCAGTTAACTCTCCCCTCTATTTATCTTCCATTTGGTTACATTTCAATATAATTATTTGTTCAGCAGGTGCCTTTATCCAAACCGTTTTACAAATACTTCAAAACCAGAAGAGCAGTATGTACATtatgagcag
>TCONS_00029324
GCTGACCTCACACTCCGTCCCTGCAGACCACCACGCACTCTACAAATCCAGGTCCGTGTCCGCCGCCAAACAAATCCCAGAGAAACCAGCAAAGCGCGGGCATGTGTACGGGGGATGCAGCACAGACAGCAGCCCGCCCTCTGTCGCGGTGCCGGCCAGTCCCACCCTGAGCAGCTCGGCGGAATCCAGCGACCCGCTGAGCTTGTACGAGGACGGGCTCGCGAGCGGAAAGGAAGACGCGGAGCCTGCCGCGCGCTTCAAGTACACCCGCGCGCCGTCTCCGACGCCCTCCGCCTCGCACTCGTACTCCTCGCAGTCATCCTCCTCGGATGAGGAGTTCGAGGACGAGCTGGCGGACCCCAGCCCTGGCTTTGACAGCTTCAGCACCTTTGGCACAGCGCCTCTGGACAGAGATTTGGAGTTCAACTTTGAGTCGGGCTCCGGCTCGCACTTTGAGTTCCCCGACTACTGCACACCAGAGGTTCTTGTGTGGGAGCTGAGGTCTTTTCCCAGACACAACAGAAGCCAGAGCCTGTGGTTGATTTCATGACTTCCTCCTCATTGTTTGCCTGTCTGCGTGACTGGAAACCGGCAGTG
>TCONS_00029325
TCGGAAGCTCAGAGCATGAAAAAGTGCAGTCGTCTAAACCTACCGCATGGTCATACGACAAACTATGCTGAAGACACTTGTCCGTTTCCATTAAACGGCTTCAGATACTTTGCGTCCAGAGCGCACTCTGGGTTCGTTTTCAGTCGAACCGGCAGTTGAACGACAGACTGTTGATTTTGACGAGATTGCCAGGATTGACAGAGCTCCTGACTGGGATATGCGCTTTGCGGATGGCGCGCTGAACCAAAAGACAGCAGAAGCAGCAACTTTGTTTCCACATTGACCAAAGCATATTTTATACAAGAGTGAAGAAGAAAGACTCTTAGCGCTTTCAACGCGTCTAGCGCTGCAGCACGTGTAGGATTTTTGTGCGCAATTAAAAGTTGAGACTGTTGTAGTGCATGGGCACAGACCTGGCTATGGTGGAGCAGACGcacaccagcagcagcagcagtagcgACGTGCTCCCCGGCGACTCCATTGATTCTGGGGAGATGGACTTAGACATGGACGCCTCTCCGACTCCAGGCTCTCCAAATTCAGCCGGTGATAAAATGGACATTGCCTGGTGCAAAACCCCATCGGGACACATCAAGAGGCCAATGAACGCATTCATGGTCTGGTCGCAGATTGAGAGGCGCAAGATTATGGAGCAGTCGCCGGACATGCACAACGCGGAGATCTCCAAGAGACTCGGCAAGCGCTGGAAACTTTTAAAAGACAGCGACAAGATCCCCTTCATCCGCGAGGCCGAGCGCCTGCGGCTCAAGCACATGGCAGACTATCCAGACTACAAATATCGACCTCGGAAGAAGGTGAAGTCATCCAGCGGAAAGACTGGAGAGAAGGCGGAGCGCGTGAGCGCTAGCCCCGGCGCCAAGTCTGCATCCAAAAAGAGCTCGAAAACTCTCAGCAGGACGCACAGAAAGTCCACAACGCTCGAGCTGACCTCACACTCCGTCCCTGCAGACCACCACGCACTCTACAAATCCAGGTCCGTGTCCGCCGCCAAACAAATCCCAGAGAAACCAGCAAAGCGCGGGCATGTGTACGGGGGATGCAGCACAGACAGCAGCCCGCCCTCTGTCGCGGTGCCGGCCAGTCCCACCCTGAGCAGCTCGGCGGAATCCAGCGACCCGCTGAGCTTGTACGAGGACGGGCTCGCGAGCGGAAAGGAAGACGCGGAGCCTGCCGCGCGCTTCAAGTACACCCGCGCGCCGTCTCCGACGCCCTCCGCCTCGCACTCGTACTCCTCGCAGTCATCCTCCTCGGATGAGGAGTTCGAGGACGAGCTGGCGGACCCCAGCCCTGGCTTTGACAGCTTCAGCACCTTTGGCACAGCGCCTCTGGACAGAGATTTGGAGTTCAACTTTGAGTCGGGCTCCGGCTCGCACTTTGAGTTCCCCGACTACTGCACACCAGAGGTGAGCGAGTTGATGATATCAGGGGACTGGCTCGAATCCACGATATCTAACTTGGTGTTCACTTATTGAGCGCTAGTTATGAAAGGACagctttgagagaaaaaaaaaacactcaaaatgaCTGGAGGGCTGCAAACTCCTCCGAGACGAGTCAGACGACGAGTCAACGACATGATTCCTCGTGTTTATCATGCATCAGATACTGTGGGTTTTCATTATCCACTGACAAGAGTGCAGATGAAAGTGCTTAGCTTGCTCGTTTGGTGCTGGAGGGAGGCGCGCTTTGGACGCAGAGGAAGGCATTGCGCGGTGGCGAGTTGACGTTGTGCGCCCTCTTCGACTTAAAAAGGGAcgtttttaaagagaaaaaaaagtctgGTCTGAATGCTTGTTGTGCTGGAGGTACTGAGCGGAGAGCATGCGAGCGATTCATTTGCTCGCGCTTGAGATTGTTTACCAGAATCGTTTGTTAGACCAGAGTCGCATGCTTTCATTACGATTTAACTACGAAAGGCTGTCGAGAAGCGTAACTGATGTTGATTGATTCTTTGAAACCGAATGGCAGacgcaaaaacaaacacaatcacCAGCTTTTCTGTCGTCATGACATCAGGATTCAGACGCAACTCagatgattcgactcttttacaCTACAAATCAGGACCAAAATTCATCAGAGGAGcgtttattctctctctctctatctctctctctctctgtctgcttTTTACTTTTTCATCCTCGAGTAACTTTTCTGCGCTGGCATTTTTATACTCTCGATGTATTTATAACGGCCAAACATTGCTCCTCTAACTCCCCTCAGTCCGTTGTGTTCTAGTCAGTCTGTTGTGTGTATAGGCTACTACACATGCACATGTCCGTCTGTCTCGCGGAAGGGCTAGACTTGTTTCGTATTATTTAATTGATGACCTCTCACATGGAACGGAGATTAAATGTTTCATTATTTTCTGAGTGTATTTTTGTACAAAATCTATCGAGGGGGTGTCAATCGGTGAATATCGCTGTTTGGATTTCCGATTTTTAAAAGCAGGGGGTTGGGTTGTCTCCAAAATCTGCCCCctaaacatgtttacagtgtcaATCCACAGgcttcttaaagagacagtatcTGCATTTCAACGACCAATCGTCATTAGCCTACGATGCGCGCGCTGAGTGAGGTGTTTTATGTAGCTGCAGCAGCGAAGGCTGCGATTTATTGGGGATACTGTACCTTTTGAATACCGACTTCTTTGTGCTTTTTCTAGTGACACGTTTCGGTTTGAACCACTGGATGGAATTACAGATACGGTCGAAATGCCTATAATTCATGAACAATGAAGTACATCTTCACTCCATAATTGTACAAGGATATTTAATCTTTTCTACTTGTTGGCTAAATGTAGCTAATTGTTTTAGTATATTATGGCATGGCGAATAGCATTTTGTATTTCTCAATTCAGGTTTATGTAGAGCAGTTGTGTTTAAGGCAGAGGATCAACATGAAGATTTCTATGTACAATGActgtaaaataagtaaaagattGCGTGTTTATGTCTGACAATGATATATCATGACAGGAGCGAGAACATATATCTTTATACATCCCTATGTTTAAGAGTGTTGTTCATGACTTTTGGAATATATAGatatgttttattgtttcattttgtGCAATATGCTGTGTACAATATTGTTTTGTCTTGCCATACCATATCTCAACATTTGAGTAGTGAACTCAAAAAGCCAGCCAATTGTGTCAAGTCACTGCCTGTCAGACCTCTGTACAGAACTTTGTCTTTTTCCAAGAAGGAAATAAAATCAGCTGGAACTGAA

Function

GO:

id name namespace
GO:0042692 muscle cell differentiation biological_process
GO:0048731 system development biological_process
GO:0048468 cell development biological_process
GO:0090257 regulation of muscle system process biological_process
GO:0050879 multicellular organismal movement biological_process
GO:0050881 musculoskeletal movement biological_process
GO:0014819 regulation of skeletal muscle contraction biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006936 muscle contraction biological_process
GO:0006937 regulation of muscle contraction biological_process
GO:0030154 cell differentiation biological_process
GO:0006941 striated muscle contraction biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0048513 animal organ development biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0030182 neuron differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0003009 skeletal muscle contraction biological_process
GO:0003012 muscle system process biological_process
GO:0030029 actin filament-based process biological_process
GO:0048666 neuron development biological_process
GO:0007399 nervous system development biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0042330 taxis biological_process
GO:0030900 forebrain development biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0031674 I band cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

ZFIN:

id description
ZDB-GENE-030131-8290 Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within closure of optic fissure and negative regulation of smoothened signaling pathway. Predicted to be located in nucleus. Is expressed in several structures, including anterior neural rod; digestive system; nervous system; neural tube; and periderm. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome and urinary bladder cancer. Orthologous to human SOX4 (SRY-box transcription factor 4).

Ensembl:

ensembl_id ENSDARG00000004588 ENSDARG00000096312 ENSDARG00000096389

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030258 False 1064 lncRNA 0.46 5 28493973 28780408
TCONS_00030259 False 995 lncRNA 0.45 5 28493973 28780408
TCONS_00030257 False 915 lncRNA 0.45 4 28493973 28780408
TCONS_00030260 False 1136 lncRNA 0.46 6 28493973 28780411
TCONS_00030261 False 1070 lncRNA 0.45 6 28493973 28780414
TCONS_00030263 False 1268 lncRNA 0.47 7 28493973 28780463
TCONS_00030262 False 1271 lncRNA 0.47 7 28493973 28780463
TCONS_00030264 False 1931 lncRNA 0.36 4 28678094 28780459
TCONS_00029321 False 2000 lncRNA 0.37 4 28678094 28780459
TCONS_00029322 False 2084 lncRNA 0.38 5 28678094 28780463
TCONS_00029323 False 620 lncRNA 0.47 2 28733658 28780381
TCONS_00029324 False 597 mRNA 0.61 2 28734048 28788466
TCONS_00029325 True 3261 mRNA 0.48 1 28786149 28789409

Neighbor

gene id symbol gene type direction distance location
XLOC_014853 CR391974.1 coding downstream 52013 28441841 ~ 28441960 (-)
XLOC_014852 nrsn1l coding downstream 126560 28356753 ~ 28367413 (-)
XLOC_014851 ndufs6 coding downstream 210096 28281201 ~ 28283877 (-)
XLOC_014850 NA coding downstream 254916 28237921 ~ 28239057 (-)
XLOC_014849 irx1b coding downstream 363315 28127654 ~ 28130658 (-)
XLOC_014856 NA coding upstream 28212 28817621 ~ 28824390 (-)
XLOC_014857 NA coding upstream 133135 28922544 ~ 29030799 (-)
XLOC_014858 NA coding upstream 313998 29103407 ~ 29122225 (-)
XLOC_014859 NA coding upstream 397120 29186529 ~ 29188136 (-)
XLOC_014860 NA coding upstream 412634 29202043 ~ 29271026 (-)
XLOC_014711 CR382300.3 misc downstream 8765218 19728690 ~ 19728755 (-)
XLOC_014845 NA non-coding downstream 691416 27801055 ~ 27802557 (-)
XLOC_014843 BX548075.2 non-coding downstream 888233 27589335 ~ 27605740 (-)
XLOC_014841 BX548075.1 non-coding downstream 909236 27581750 ~ 27584737 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_09232327_09233391 SOX4A, SOX4 coding CI01000054 null 9231999 ~ 9234242 (+)