XLOC_014869


Basic Information

Item Value
gene id XLOC_014869
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 29914349 ~ 29915967 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030286
TGTGTCTTGTCAGGGTCTGCTTGTGCTGGCCTGATGTCTTGTTGTGGTTCCTGATTCTGCGACTATTTTCCAAGCTGCTATCGCACACTTTTAGCTTTGTTGTTGaactttttattgttaaattaactTTCACTTGCACTTGGATCCATTTGACTTTGTGTCATTACAATAACGTGACAACACTACTCATGAATGAACGCTATATACTAACTAatgctctcagatttcatctaaaatttcttcatttgtgttgcaaagatgaacgaaggtctcaggggtttggaatgtTATgaagatgaataataataacatcattttaattttgggTGTTGGAGCGACATGCTGTCAGAGAGCCATCTCTGCTCGAGGAAATTTGCCATGCTGACGAGCTGGAATGAGTTTTCTGCCATGGAAGCTTTAGGCTGAAGCTCTTGCCCATTGTCCTTTTTGAGTATGGATGGACAGATTGTGTCTATGAGGGCAAAGAGGGATCGGCACCAAAGCCTAAGGCCTGCTGCAATCCACCATGATGGAGAGGAGCAAGTAGGGTGAGGAAATGAGGAGCTGAACAACACTCTCATATACCACAGATGAGCTCTGGAAAAATCAAAAGAGAAGTGACGACAATAGGAGTTGAGAATGGATCAGACTTGGGACACTTTTGTGGCTTTTTAATGTTAGTGTGGCAGTTATTCATGGGACTGTGgctttactttttgttttgtggatatttattttgtctttaaaacttaaattttctaaaatttaaattattttattaaatactcACCCTTAATTCGTTGTTTCAATACCTTGAGgacttcattcatcttcagaacacaaaatgcattttttagaTTAAACAAAGAGCTCTCTGACTTCCCATAGACAGCAACAGCCTTGAGatgtttaaagtccagaaaaaaaaaaaaaaacattgtcaaaatgcTCTATCAACGACTACAATCTATCTTAATTCAATCATACGGATCTCTGAAATAATATTGTGtgcacaaaaaaaagcaaaactacTTTGTTCACCAATGATTTCTCTTCCTCATCTGGTCATCAGTGTGTGCATTTACTGCAGGTAGCATGACATACTTTTGTTAGAGTGGGCCGCACAGCACACAACCATTGTATTGTCTGTAGCAAACACACACCAAGATCTACTGTGGCTGACAAGAGGAcacactattctacaccattcaTTCATGCTGTCCACACACAAATTGATTTAGCCAACATAACAATTTTAAGTAGATTAaactcaaaaatatttatttgtatcacaaaaatttcaacaattttgttgtctcagctcattttaaatgcgtagtttgaacaagcagcaaaaatacttTTTGAGTGTAGGCATTAACATTTTAGGACCATTAATGTATATGGAGGAGGGAGCGCTCAGGTTTACTCTAAATTAATCTTAGAGTAATTGTGTTCAGATAATGAAAGAAGGTCTCTGGGGGTTTGAACAAGATGACCATGAGTAATAACAGAATgataattttttgggtgaataaACCTTTAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030286 True 1547 lncRNA 0.37 2 29914349 29915967

Neighbor

gene id symbol gene type direction distance location
XLOC_014868 kpna6 coding downstream 26720 29861859 ~ 29887629 (-)
XLOC_014867 txlna coding downstream 60914 29834440 ~ 29853435 (-)
XLOC_014866 eif3i coding downstream 81473 29822500 ~ 29832876 (-)
XLOC_014864 NA coding downstream 118061 29750328 ~ 29796288 (-)
XLOC_014865 CU861666.1 coding downstream 129137 29785095 ~ 29785212 (-)
XLOC_014870 BX547939.1 coding upstream 231403 30147370 ~ 30300852 (-)
XLOC_014871 NA coding upstream 396878 30312845 ~ 30316143 (-)
XLOC_014872 NA coding upstream 431542 30347509 ~ 30359059 (-)
XLOC_014873 agr2 coding upstream 484405 30400372 ~ 30404096 (-)
XLOC_014874 ppp1r10 coding upstream 492350 30408317 ~ 30422239 (-)
XLOC_014711 CR382300.3 misc downstream 10185594 19728690 ~ 19728755 (-)
XLOC_014860 NA non-coding downstream 643323 29202043 ~ 29271026 (-)
XLOC_014859 NA non-coding downstream 726213 29186529 ~ 29188136 (-)
XLOC_014858 NA non-coding downstream 792124 29103407 ~ 29122225 (-)
XLOC_014876 NA non-coding upstream 554003 30469970 ~ 30470501 (-)
XLOC_014879 NA non-coding upstream 676352 30592319 ~ 30623732 (-)

Expression


Co-expression Network