XLOC_014879


Basic Information

Item Value
gene id XLOC_014879
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 30592319 ~ 30623732 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030293
agctggaaagcCGTTCATAAGCAGCTGATGTGCAGGGTGGAGATGGGATGACCAGATGGAAACAGATGACCAGAGGACATATCAGAGGACACAGGAAACACAGAAATTCGGGTACAGGGATCGATGACAACCAGAGGAGGAACCAGAAGAAACCACACTAAGAAGGAGAGATGCAGACACTGGAGTTCACAGGAAGCGAGAGAGGCGTCTGTGCCAAGCTTAATGAAGCCACATAGCGAGTATTCTGTTGCTATGACAACCTTCAGTCACTGAGGCCAAAGTGTTTTGTGGAGCCatggatggagagacagacaCTCCATCACTCAGAGGACAGACACAGTCTATCATCTCCAAgcatgataatgatgatgatgtaaccACCATGGGCTGAATATCACTGTCCTACAGTGTTCACGCAGAGCTGGTTCTACATATAAGCACACATACATAAGCACAGTAAATCTGTAGTGGAGTTGCTGAAGCGGAAACATAGGTGGGGACTTTATGCTTCAACACCCCCTTGTGTTTCTATCAAATCCACTTGGAGTGATGCCAGTAGTAGGATTTGACCCTTAAGAATCAGTAATATCTCAGTAAAGGTGGAGGTGACGTGTCATTGTTTTCTTTATCATGGTGTCTTTTTTAAATGCTACAGTATATAACAGagtaaatacaaatgtatatcACAAGCCCCCTCGCACACCAAAATGAAGAAAGCAtggaaataatgaaatggccagcACAGAGCCCTGATTGCaaatttgaatataaaacaatgaatagCAAAGCCAATATCCGGATGTATTCCTGATTGCAAATTTTGGGAAAATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030293 True 831 lncRNA 0.43 3 30592319 30623732

Neighbor

gene id symbol gene type direction distance location
XLOC_014878 hpcal4 coding downstream 27197 30517311 ~ 30565122 (-)
XLOC_014877 bag6l coding downstream 81389 30475281 ~ 30510930 (-)
XLOC_014876 NA coding downstream 121818 30469970 ~ 30470501 (-)
XLOC_014875 abcf1 coding downstream 144576 30428913 ~ 30447743 (-)
XLOC_014874 ppp1r10 coding downstream 170080 30408317 ~ 30422239 (-)
XLOC_014880 NA coding upstream 97280 30721012 ~ 30722504 (-)
XLOC_014881 trit1 coding upstream 99035 30722767 ~ 30800082 (-)
XLOC_014882 myclb coding upstream 181781 30805513 ~ 30811161 (-)
XLOC_014883 NA coding upstream 207458 30831190 ~ 30835097 (-)
XLOC_014884 si:ch211-194e15.5 coding upstream 273523 30897255 ~ 30904590 (-)
XLOC_014711 CR382300.3 misc downstream 10863564 19728690 ~ 19728755 (-)
XLOC_014872 NA non-coding downstream 233260 30347509 ~ 30359059 (-)
XLOC_014871 NA non-coding downstream 276176 30312845 ~ 30316143 (-)
XLOC_014870 BX547939.1 non-coding downstream 291467 30147370 ~ 30300852 (-)
XLOC_014869 NA non-coding downstream 676352 29914349 ~ 29915967 (-)
XLOC_014885 BX927219.1 non-coding upstream 338991 30962723 ~ 30965661 (-)
XLOC_014888 BX465206.1 non-coding upstream 455594 31079326 ~ 31083973 (-)
XLOC_014901 CR382336.1 non-coding upstream 1706781 32330513 ~ 32330630 (-)

Expression


Co-expression Network