XLOC_014880


Basic Information

Item Value
gene id XLOC_014880
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 30721012 ~ 30722504 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030294
TCTAGGCTAAATATACATCACACATACAATAGCTGGAAAGGAGAGTGTTTACATAGTGCTTGCAAGCACCTGTCCCACATTTACACTGATTTGGGTCACTGATTTGGACTTTGCTGTGGATGTCAGTGAATCCGGTAAGAGCGAGGTGAGCCTCTCATCCATGtgtatgtgcgcgtgtgtgttttattttagctcCCTGAGAGCTTGGCGGGAAAGTCTTAGTGGGTCAGCTGATCTTCCTCTTGACGGATAACAGCTCATTTAGACGAGGGAGTTTTCAGGGACAAAAGTGAATGGAAAAAAAGGCAAACAGCAGTCTGCTGGGGTTTGTTGACCTTTCATGTCATCTGATTGTGCTTTTAAAGACCTGTCTGTTTACTTCATGAAACATTCAGATTTTACAGCGTTATAGTAAATTTAACACTACTTATGAAaactttttagtttatttacttactGATATGCCAGATCTAACTTTCCTCTGTGGAACGCAAAAGTAGAAATATTCAGTTCAGACTGCACAATACCGGTCTTTAATTGCACTGTTCATTTGGCTAGGTAATTCTTGAGTGACAGTAGGTATGGAGATGTTAAAGCTGATTGCTAATAACTTGTATCATATGTAATAGTGATTGACAGTTGGCACAGCTTTTGAGATGCTTCACATCAAACTGACTagcatttttacattgtttttaatgCTCTACTATGGGTTGACTCACATCTGTGGTGTTGACCAATGGGAGCACATGCAGCTATAGCAAACATGTTGAAATGAATGTGAAATGGAATTATGAAACAAATTGCTAGTCACATTCACATCAAATTCACTAGcatgtttactttttttatgCTTTACAATTGGTTGACTCACATCTGTGGTGTTGACCAATAGAAGCATATGCAGCTAGCAAACATGATGAAATAAAAGTGAAGCTGCATCTCAGATGGCACGCCATGAACTTATGCACTACGTACTTATGCACTtaaacactcaacagcatagtaaatgtatgtagtgtcgtcctaAATTGGACgctaatgttttttactaaggGGAAATTCAATTCGTTTCCCTGTTGATGATTAGTGAAATAAATGGgggctataatcactctcgtaggagaattttgctttcaaaaTGCAAAATAGTTATCCAACATGAGCGCCCGAAAGCTCCACCCCTTCCACTATGTTAGCAAAGCTGCGGTTGTTGAGTGTgagaagtgtccatcattccacactttttTGACGGTTAAATAAGTGGATCATCTGagtttttaaagggtcacaaaacaccaacacattttttgagctgttgacagtcatatgt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030294 True 1333 lncRNA 0.39 2 30721012 30722504

Neighbor

gene id symbol gene type direction distance location
XLOC_014879 NA coding downstream 97280 30592319 ~ 30623732 (-)
XLOC_014878 hpcal4 coding downstream 155890 30517311 ~ 30565122 (-)
XLOC_014877 bag6l coding downstream 210082 30475281 ~ 30510930 (-)
XLOC_014876 NA coding downstream 250511 30469970 ~ 30470501 (-)
XLOC_014875 abcf1 coding downstream 273269 30428913 ~ 30447743 (-)
XLOC_014881 trit1 coding upstream 263 30722767 ~ 30800082 (-)
XLOC_014882 myclb coding upstream 83009 30805513 ~ 30811161 (-)
XLOC_014883 NA coding upstream 108686 30831190 ~ 30835097 (-)
XLOC_014884 si:ch211-194e15.5 coding upstream 174751 30897255 ~ 30904590 (-)
XLOC_014885 BX927219.1 coding upstream 240219 30962723 ~ 30965661 (-)
XLOC_014711 CR382300.3 misc downstream 10992257 19728690 ~ 19728755 (-)
XLOC_014872 NA non-coding downstream 361953 30347509 ~ 30359059 (-)
XLOC_014871 NA non-coding downstream 404869 30312845 ~ 30316143 (-)
XLOC_014870 BX547939.1 non-coding downstream 420160 30147370 ~ 30300852 (-)
XLOC_014888 BX465206.1 non-coding upstream 356822 31079326 ~ 31083973 (-)
XLOC_014901 CR382336.1 non-coding upstream 1608009 32330513 ~ 32330630 (-)
XLOC_014908 CR318628.1 non-coding upstream 1927163 32649667 ~ 32649781 (-)

Expression


Co-expression Network