XLOC_014883


Basic Information

Item Value
gene id XLOC_014883
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 30831190 ~ 30835097 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029791
gcttattctcttagttgtcaggggtcaccacagcggaatggaccactaactattccaacatatgttttacacagtggatgcccttccagctgcaacccagtacaccgtatgtctttggactgtacctagaggaaacctatgcgaaaatggggaaaacatgtaaactccacacaggaattcCGACTGGCCCAatctggactcgaaccagtgaccttttaaccactgagccaccgtgccaccctttaAACAGTGgacttaactttaaaaaaGTTGATTCATTTTGTCAGGTCACATGAGGATGTCTGCAATCCATTTGGAAATGACGAGCGGTCGGTATGACCAAACGAAGACGGCGTTGGATCAATGATGTGATCATTCTTTTTGGCTGCTGCACAGATTTCCAGGAATGCTGATGAGGTGAGCAGGAGGAGAGAGATTCCTATCATACAGGCGCACCAGGGGACGTCATTTAACCCGATCCCTGTCTCACATTCTTTCCTGACaatcttttttcttcttcagacTTACATAATGCCTCATACAAGGACATAGAGTTGAAGGTGAAATGATCAGCCTTCCAGTGTAATTTTCTCCCAAGCTCTGTTTAGCAGAAAGAAGacttatttttcaagacactaaatCGTTTTTAGAACTAACTCCTGATAacttgtctttgccatgatgagagtacatCATATTTgattagttattttgcaagatactagaaTTGACCAGAAGTGCTACTTAAAGCCtgaactaggctaattaggttaactaagttgGGTTAGGGGTTTGTCAACTGTCAATCTCTTGGCAcattgtaactttttgatttagtgactaattcgtatgaatttgttcgATCTCTTTTGCACAGTTTAATACGATTTCCTAACATCCCCTAATGACTGGTTGGGTTTcgaggtggggtttggtgccatgcctccttttaaaaatcttacatttttcatacaactgaactaacctgtcacgataaccagcgatcttACTCCAttgatcgctggttctcactaACAAAAACCagggactacacttccgcctttgatggactacatattcatacatgcacttcgcccagacacacatgcttactcatctagactgattacattcgcaacacctgaggattgtcagagactgattgcactcactacttaagccactcattcaccctttcaggttgccgagtcttgtttatcagtTGAtgacactacaacgcgttttccttgtcttgtttctccgtgtttagaCCTAAGCCTAGATTATCCTTGTACCCTTGTTTGCCgccttctgacctcttgcctgttattcgactacgattctggattgccctcagacatctgtttgcccctgtattgaccactgcttgcctaacaacgaataaacctgcatattggatcctgcCCCAGTTGTGTGTGTCATCCCCTGTCGTTACATAACCTCTaaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029791 True 1469 lncRNA 0.43 2 30831190 30835097

Neighbor

gene id symbol gene type direction distance location
XLOC_014882 myclb coding downstream 20029 30805513 ~ 30811161 (-)
XLOC_014881 trit1 coding downstream 31108 30722767 ~ 30800082 (-)
XLOC_014880 NA coding downstream 108686 30721012 ~ 30722504 (-)
XLOC_014879 NA coding downstream 207458 30592319 ~ 30623732 (-)
XLOC_014878 hpcal4 coding downstream 266068 30517311 ~ 30565122 (-)
XLOC_014884 si:ch211-194e15.5 coding upstream 62158 30897255 ~ 30904590 (-)
XLOC_014885 BX927219.1 coding upstream 127626 30962723 ~ 30965661 (-)
XLOC_014886 rbbp4 coding upstream 164736 30999833 ~ 31007417 (-)
XLOC_014887 bzw2 coding upstream 172804 31007901 ~ 31042709 (-)
XLOC_014888 BX465206.1 coding upstream 244229 31079326 ~ 31083973 (-)
XLOC_014711 CR382300.3 misc downstream 11102435 19728690 ~ 19728755 (-)
XLOC_014876 NA non-coding downstream 360689 30469970 ~ 30470501 (-)
XLOC_014872 NA non-coding downstream 472131 30347509 ~ 30359059 (-)
XLOC_014871 NA non-coding downstream 515047 30312845 ~ 30316143 (-)
XLOC_014901 CR382336.1 non-coding upstream 1495416 32330513 ~ 32330630 (-)
XLOC_014908 CR318628.1 non-coding upstream 1814570 32649667 ~ 32649781 (-)
XLOC_014919 BX957357.1 non-coding upstream 2537267 33372364 ~ 33372694 (-)

Expression


Co-expression Network