XLOC_014884 (si:ch211-194e15.5)


Basic Information

Item Value
gene id XLOC_014884
gene name si:ch211-194e15.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 30897255 ~ 30904590 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029370
ATGGTGGTGTTTTTAAGCAAAAATGTTCGGTCTCTGTTGTCAATCTTCAAGAAGAAGGGTCAGAAGCAGGATGAGCAAAGAAAGCTGACTGTACACTACACTGCTTCCCAGCACTACCAGGAGAATGTGTTCATAGAGGGGAGCAGGCCAAAATATCTGGAGGACCTGCATACAGAGGCTCAAGAGGGACTGAAGATACTACAGCAGGAGGAGGAAGACACAAGCTCAAAAGAAAGGAATGAATCGCTTGAGAACGATAGCACCTCAGGACACTCCATCATTTCAGTGTCGACTGCCTCAGCAGTCTCTACACGTCCAGTGCTTACACGTCAAGGTTCTACATTTAAGCCCTTAAACCCTGTTAAACGACTGGATAAGTCCAAGAGACGGAGTCGAAGAACAACTATCATGGGAATACCACAGCAAGTTCAAAGAGAACTTGATATGGCAAGAGGAACTATGCTGCAGCAGCTTCCAAACAGAGGACATGACAGTGAAGATGATTCATCTGGAACAGTTGTTCTACAAACAATTGATGGAGATCTCCCATCTGTAAATCATGAAGGGGCTCGTGTACACCTGCAGAACATTGAAGTCCTTCAGGCATCAAGAGATGAAGACTTGCTTTTGAACCACATCCATTCTGTCTACCAAGATGAGTTAAACAGAAAGCTTGGACTTGGAGCATGCCCTACACAGAGGCCTAAGTCACTTGCTGTGCCAGGGATGACCACTTACTCTTTCCTACAAGAGCCTCAAGGCCCTGTTATGTCTATTTCTCCACAGGCAACATATTTATCTAAGATTATTCCAAATGCAGTTTTGCCAGCTGCAATAGATATCATTGAAATCAATCATGATCACAACCGATGCAGTGCAAGTACAGCTAGCAAGGGTAGTATGGCATCAGCTAGCCCATCTTCTTCACGGTCTGGAAGTGGGACAAATCAAGCTCCTCCCACTACTAGTCCCAGCAGGAGCAATTCACAATCATCGGAGACTATAGTCTCTAATTCATCCACAATCTCTTCAAAAGGAAAGTGTCTACCAACCTTTGATGCTGACAGCGCCAAAGACATTTCGGTTTTAATCCCAAAGGACATGAGTGTTTCGAGCTCAAGCAGTTGGAAAAGTTCTGAGGGGAAAGGTACAAATCACAGACTGAACCCCAGAGAGTATGGTGATGCAGGGGACAATGTCAGAAACAGCCATTCGTTCTCCCGTAGTCTTTCTGTTATGAAGACAAAATTACCACCAGCACCACCTCAGAGAACCTACTCTCTGCATCATGAAAACatgcagagacagagagagcaggGAGACATACAAGATCCCAAAGATGTGGCACCAAATAATAATGAGCAAACAAACAGAGATATCAGCAGTACAAAAGAAAATCATCAGTCCGCTAAAAACAAGAAGAGTTCAGTCCATTCTTTAGAGCTTAGATCAGACTTCCACACAACTGTGAAATCTAGTCCACTTAGTCCTGATCAAGTTTTCACTGGAAGGCATGCCAGATCAGGTAACTCATCCCCACAGAAAACTAGAGAATGTGGTGAAAATTTTGATAGGACTTTGTCTCCTTCAAGTGGCTACTCAAGCCAAAGTGGGACACCTACGCATTCCCCTAAAGAGGTCAGTCCCTCCTCACCTGGAAAGAGAAGAGTAAAGCCTTCAAAACCTGAGAGAGTATGTGCAAAGACTTCACCTGTGGTTTCGGTGTCTTCATCACTAACATCTCTGTCTTCAGTCATATCAGATACAGCACATCAGGACATTCAAACCAATACCACTTCATCGGAACCACTCAAATTCTCCCCTCCACTTACAACAGTGAAAAACAAAGTTACACCTACACACCAAACTATTGCTCTTAGGACACTATTCAACATTCCCCCACCACCCAAGGTAAAAGCCCCATCTCCCCCACCCCCTGAAACCTGGGTTCAAAATAAACAGACCCTTGAACTACTATGTGGCCCAGGCCCAAACATCCATAAGTTGGAGTCATTAATAAgtaaaactcaaaataaaaattcaatgcaaatcaatgaaCAAGTAATTCCAAAGACACAGACAACAGAAGAAACTAAGACTGAGAACACAGTTGTAAAAGAGCTAACTAAATCTGCATCACCACAAGTGCATAAACAAATGATGGTAGAACCTCCAGATGTAAGGCATACAGAAAAGTCCATTTTACATAATGAATTAAAAAGTCCAGAAACACTTGCAAAGGTAAACCAGATCCCTCACACACAAGATGAGAAAACGATAGAGGACCAAAAGGACAGATGGAGTCAAACACTTCCTACAACAAATGTACCATCTATTATAGTTGATCAAAGCATGCTGTCACAAACAAACTCTATagaaaaaacaaaagctgcaactGTGAGCAGCAATGAGAACCAAAGAAACTGCATTGTTACCGACATCGTGAATCGTATATCAGTGCAAACACTCAATATAGAAGTACCTGAGGTCAATGGTGTTTCTCCACCTCCTTCTCCACCTCCAGAACACCACCCTCCTCCCCCACCTATTAAAAAGATGTCAGACATGTCAGTGTCTATACCACCTTCCGAAAAGGAGGAACAAAAGCAAGTGGAACAAGTAACTTTCCCAGAGTCTTCTTGGCCTCCACCTCCACCACCAATGGAAGAGTCAACTGAATTGATGTTTGAGGAACAAGATGAGCTTGACTTCCCTCCACCACCCCCTTCATTCATACATGAACCCATGTCAGAGATATCTGACGATTTTCATGAAGAGTCATGTGAAGAGGTCAGTATAAAATTATTGTCAACGAATGTCTCAGATATGGACAGTAGTCCAGAACAAGACTCAGAAAGGCATACCATTCTGCCAAAAAGAATTGTACAAAACAGTGTGGAGGTCAGACAACAAGACAAGTCTTCTGACAGTGTATCAGAATTTTTGGAGGACCAAGCTGAAATAGAAAACACAAATGTAGCCTCTACGATAATATCCAGTCATTTACCAGATAAGAACTTACATGAGAAGGAAACGCTGGTTTCCACTAGCATTCCACTTGCACCTCCTCTTCCTGTAGAAGAACAATCTACTATTAACTTCCGAAAGCAACTGAGCTTTGTAGATAAAGACAACAGGAGCAAAGAACTTCTCTGTCGACACAAAAGCACACCTATTCCAAAGGAGGATGCCAACATTCCACTCGTCACACCTTCTTTACTCCAGATGGTGCGACTAAGATCTGTAAATGTTGGTGAAGACCAAGTAAACAACGATTCCAAACCAAGTACTGAGCCTACAACAAATGAGGATCATAGTATTTCTAGTCAAGTAACACCACAGAAGCCTATTCGCAGATCCCTAACTTTGAAGTCCAACTCACCTGCTAAGTCGTCCTCTGCTTCATCCGCAGTCCCATCCATGTGTCTTCAGGAGGCCATACGTATGAAGACTGCAGCAATGTCCTGCAGTGGAGTACCTGCAATGCTAAATCTTCGCTCATCTTCAGGTAGCAGTGCTACTTCACCCGTGCCATCTCCTAAATCACCAGACGGATGTGACTTGCTAATGTCCCCTGCATCTACAGCCAGTTTCATATTCTCCAAAAGCACAAAAAGAGTTGTGATTGAAACACCTACTTCTCCTGATGTTCAAGCAAGCCTCAAACAGAGTCTTGCAGCTGAGATAATGCAGGTTTCCGACCAAGCCAAGACGATGATTACAAATGGAACAAAAAAGCCAATTAAGGTGCCGCCACCTGTTGCTAAGAAACCAGTGCATGGAAGCAATCCTCCAAACAAGATGGAAAATGCAACACAGGATAAGACGGAGATCTTGACAAATAAGCAAATAATGAGGGTTGATGTTAATGGGCAAAGTGATCAAGTGCATCCTGCTGGCCAGCGAGCACAATCATTAGGGAACCAGGAACAAGCAAGTAAGGAAGCATTCGCAATGAACATGTCAATTTGTGCATGA

Function

symbol description
si:ch211-194e15.5 Predicted to be involved in cell differentiation. Orthologous to human KIAA1522 (KIAA1522).

GO:

id name namespace
GO:0030154 cell differentiation biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-393 Predicted to be involved in cell differentiation. Orthologous to human KIAA1522 (KIAA1522).

Ensembl:

ensembl_id ENSDARG00000061804

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029370 True 3978 mRNA 0.43 5 30897255 30904590

Neighbor

gene id symbol gene type direction distance location
XLOC_014883 NA coding downstream 62158 30831190 ~ 30835097 (-)
XLOC_014882 myclb coding downstream 86094 30805513 ~ 30811161 (-)
XLOC_014881 trit1 coding downstream 97173 30722767 ~ 30800082 (-)
XLOC_014880 NA coding downstream 174751 30721012 ~ 30722504 (-)
XLOC_014879 NA coding downstream 273523 30592319 ~ 30623732 (-)
XLOC_014885 BX927219.1 coding upstream 58133 30962723 ~ 30965661 (-)
XLOC_014886 rbbp4 coding upstream 95243 30999833 ~ 31007417 (-)
XLOC_014887 bzw2 coding upstream 103311 31007901 ~ 31042709 (-)
XLOC_014888 BX465206.1 coding upstream 174736 31079326 ~ 31083973 (-)
XLOC_014889 arl4ab coding upstream 434715 31339305 ~ 31341850 (-)
XLOC_014711 CR382300.3 misc downstream 11168500 19728690 ~ 19728755 (-)
XLOC_014876 NA non-coding downstream 426754 30469970 ~ 30470501 (-)
XLOC_014872 NA non-coding downstream 538196 30347509 ~ 30359059 (-)
XLOC_014901 CR382336.1 non-coding upstream 1425923 32330513 ~ 32330630 (-)
XLOC_014908 CR318628.1 non-coding upstream 1745077 32649667 ~ 32649781 (-)
XLOC_014919 BX957357.1 non-coding upstream 2467774 33372364 ~ 33372694 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_08081739_08089067 NA coding CI01000054 null 8081153 ~ 8089811 (+)