XLOC_014888 (BX465206.1)


Basic Information

Item Value
gene id XLOC_014888
gene name BX465206.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 31079326 ~ 31083973 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029380
CAGAGTACAGATTATGGAGGTATCTGAAGTTGAACTAACTGGAAGCAGGGAACCATACTAATAAAGTTCCTTAagcagGTTCCTTGTAAAGATTAACCCAGGGAAGGATCGAAAGTGGAGAAGACCAGATCAAGAAAGACTATATCAAGATCTGCGGTCAGTTCAAAGGATGTTTTGcattggactgtttttttttggctttgaccCTTGCTTGCCCCTGACCTCACTCTTGGACTGCCCTGTtggattttcagtttatttaattaaaaatttttttttggttctgggtagatgctaataaatatttaattgtaattatttaa
>TCONS_00029381
ACGAGGAAGTCAAGTCAAGTCCGCCATTTCATCTTCTTCTTTTTATCggAAAAGAAAGGAATCATGCAAGGATGCAAGCTGAAGGAAAGGACAACTCTCACATCAGTGCATTACTAATTGTTTTACTTCATCATCAAGCACACCagGTGGTGCGGTGCACAGTGGATAGCTCTGTTGCCTCCCAGCAAAAAtgtttctggttcgagcctcggctgggtcagttggcatttctgtgtgaagtttgtatgttctccccgtgttggcgtgggtttcctccgggtgctcctgtttcccccacaagacatgcggtacaggtgaattggctcagattgtgatggacctggaatgcgacaccaatcagccttaagtcaaGATCCAAATGAAGCACCAGAGTACAGATTATGGAGGTTCCTTGTAAAGATTAACCCAGGGAAGGATCGAAAGTGGAGAAGACCAGATCAAGAAAGACTATATCAAGATCTGCGGTCAGTTCAAAGGTACTTTCACTAATTACCAAGATTTCAGACTATGAATTGATGGAGAAAACTTTGAGTGTCAGATCTTCCTACATCCCCTAGCAAAAATTCTTCCCAGTGTCTTGTAGTAGAAGTGATGCAGTCAATCGAGTTTACATTATTTCGTAAATTGCTttctgatttaataaaaaatatattaaccaaacttgattaatgtaacAATTTTGATGAAAAGGGCATGTTTTACTAGAGCTTTTAGCACAAAGGCACCCCCATCTTGGAATattgctgtgtctgacgtcacggggTTGGTATGCTAGAAACGTTTTTGAATGAGGTATTTGTATAATTTATACATAGTCTGTCTTAAAGCGTCACTAAATtgtacaggtcaaagcaatctgttgttac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095601

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029380 False 323 processed_transcript 0.37 3 31079326 31081251
TCONS_00029381 True 887 processed_transcript 0.41 6 31080178 31083973

Neighbor

gene id symbol gene type direction distance location
XLOC_014887 bzw2 coding downstream 36617 31007901 ~ 31042709 (-)
XLOC_014886 rbbp4 coding downstream 71909 30999833 ~ 31007417 (-)
XLOC_014885 BX927219.1 coding downstream 113665 30962723 ~ 30965661 (-)
XLOC_014884 si:ch211-194e15.5 coding downstream 174736 30897255 ~ 30904590 (-)
XLOC_014883 NA coding downstream 244229 30831190 ~ 30835097 (-)
XLOC_014889 arl4ab coding upstream 255332 31339305 ~ 31341850 (-)
XLOC_014890 scin coding upstream 263702 31347675 ~ 31372896 (-)
XLOC_014891 tmem106bb coding upstream 308377 31392350 ~ 31402429 (-)
XLOC_014892 necab1 coding upstream 353716 31437689 ~ 31522677 (-)
XLOC_014893 tdp2b coding upstream 485019 31568992 ~ 31576321 (-)
XLOC_014711 CR382300.3 misc downstream 11350571 19728690 ~ 19728755 (-)
XLOC_014880 NA non-coding downstream 356822 30721012 ~ 30722504 (-)
XLOC_014879 NA non-coding downstream 455594 30592319 ~ 30623732 (-)
XLOC_014876 NA non-coding downstream 608825 30469970 ~ 30470501 (-)
XLOC_014901 CR382336.1 non-coding upstream 1246540 32330513 ~ 32330630 (-)
XLOC_014908 CR318628.1 non-coding upstream 1565694 32649667 ~ 32649781 (-)
XLOC_014919 BX957357.1 non-coding upstream 2288391 33372364 ~ 33372694 (-)
XLOC_014920 NA non-coding upstream 2698810 33782783 ~ 33786703 (-)
XLOC_014924 CU928445.1 non-coding upstream 2893905 33977878 ~ 33977994 (-)

Expression


Co-expression Network