XLOC_014902 (gmpr)


Basic Information

Item Value
gene id XLOC_014902
gene name gmpr
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 32472996 ~ 32487469 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029401
CAGACGTGCAGGAAACACTTCTatcgctgctgctgctgctgccacTCCAGGCTGAATGCAagtggagggagagagagagaaagagggaaggAGAGAAGGAGCGTACAGGCCTTGCCAAATAAAGCCATGGGGGCCTGGGCAGTGACGGCCCTTTCTACACTATAAATACGCTGTTCTTCTGCCGGTTCGGGTTTGGTGCCTGGAGCTCTGGACCAGTGACTGCACCAACCCGGAGACTCTCCTCCACTCTCAGGACCGCCAGTATGCCCCGGGTGGACGCCGACCTCAAACTGGACTTCAAAGATGTCCTTTTCAGGCCAAAGAGGAGCAGTCTGAAGAGCAGGTCTGAGGTTGACCTGCAGAGGACCTTCACATTCCGGAACTCAAAGCAGACGTACAATGGCATCCCGATCATCGCTGCTAACATGGACACCACCGGCACTTTTGAGATAGCGCAGGTGCTCAGCAAGCACACGCTCTTCACAGCCATCCAGAAGCACTACTCCCTGGAGGAGTGGAAGACTTTTGCAGCCAATCATCCAGAGTGCCTTGAGCATGTGGCCGCCAGCTCAGGCAGCGGAGCAGCAGATCTGGAGAAACTCTGCAGCATCCTGGAGGCCATTCCTCTCATCCAGTACATCTGCCTGGACGTGGCCAACGGATACTCCGAACACTTTGTGGAGTTTGTAAAAAGAGTTCGGGAAAGGTTTCCCAAGCATACCATCATGGCAGGAAATGTGGTGACAGGAGAGATGGTGGAGGAACTCATTCTGTCTGGAGCTGATATTATTAAAGTGGGCATTGGGCCAGGTTCAGTGTGCACCACACGCATTAAGACCGGTGTGGGTTATCCTCAGCTGAGCGCTGTTATCGAGTGTGCTGACTCGGCCCATGGACTGAAAGGACACATCATCTCTGATGGAGGCTGCAGCTGCCCTGGGGATGTTGCCAAAGCTTTTGGTGCTGGTGCAGATTTTGTCATGCTGGGAGGAATGTTAGCAGGACATGATCAATGCGCTGGTGAAGTCATTGAGAAAGATGGTAAGAAGTTCAAGCTGTTTTATGGCATGAGTTCAGACACCGCAATGAAGAAGTACGTCGGAGGGGTTGCAGAGTACAGGGCATCTGAGGGCAGGACGGTCCAGGTGCCCTACAAAGGTGATGTGGAAAACACCATCAGGGACATCTTGGGTGGCTTGCGCTCCACCTGCACATATGTAGGAGCTGCCAAACTGAAAGAACTGAGCCGCAGGACGACCTTCATCAGAGTCACACAGCAGTCTAGCCACATGTTCTCCTAGACACGCATCGCTGAAAACATGCACACTCACAAATACAGAGTCACCTGTAAAGTAATACACATACATACTCTTAAAAAGGTTCCAAAAGAGAGTTTTCATAGTGATTGCATAGAAGAACAATttttggctcttttttttttcttcttcagagtgttaagaacattttaaaggtgctgtatgtaagctttgactcttctaaagtataaaaatggGGTGGGGGTTGGTGGCAAGGTGTCAGGGGTTAGATGTCTGAATAACACAGCTGAGAACAGGGTTATTAACTGTACTATGCACCGGGTTTCAGGAGGGCGGATACTAAACTAAAGTCAGCAACCCGGGTTTGTTATCGACTGTACTAAAAAGCtgaggattgtgtgtgtgtatgtttgtgaaattACAGGATTTTTCTGGGAGAAATTACAAAACAGGAGGGTCGTGGgaaatgggtctgaaatacaggagactcctgagaaaaatgggagtgttggcaatTTGGCAACGCAACAGAAATTTAACTAcaaccattcagaagcacagaatagtgcactcactgcaatCCAACAAActtgtaaggtttataatctaatgaataaatattaaacctctttaaatggttaaatgtacatgctgaattactgatatgtgttggcttgcactgagtcacagttctaaaactctatttcaaacagtttaatatattttaaggtgacgcagtaggtagtgctgtcgcatcacagcaagaaggttgctagtttgagcctcggctggctcagttggcgtttctgtgtagagtttgcatgttcttcccgcgcttgtgtgggtttcctccgggtgctccggtttcctccacaagtccaaggacatgcggtacaggtgaattgggtaggctaaattgtccatcgtgtatgagtgtgtatggatgtttcccagagatgggttgcagctagaagggcatccgctgcgtaaaacatacgttggataagttggtggttcattccactgtagcaaccccagattaataaagggactaagccagaaaatgaatgaataaattaatatattttcaagatctgaggtgaactatctgctgctgctttcagttgtcaggcaataaatgtcatgtaaaatggcatttaacctcacattattagcatttaacactgaataaagcacatgaggagTACCtggggtgatcattgtcagttttcttttgttcagctgcaagaaatagaagccatttaaTTTCTTCAGGTGTTGCTTAGGACAAAAACACTGTTAACATCAACCTTTAGACTCGACAGTCAAGCACACtcctgttggtgtcatcaatctggcaacctgtgcttgtgtGCGTTTTGAGCCTGGTGTGCAAtacttagttcaaccactgggtgtcaaacttacatactgcatctttaatGAACGTTTTACGAactgaatttgtattttttttttatcaaattttaaacGTTCAAACTGgactttgtaaatgtgaattgtgttgtggatggatgcattttattttgtaaatttattatttcCGAGACTGATCTGACTCCTCTtttggaacctttatttttaagagcagTGACACACCAAGCTGACGGTTACCCAATGGGCAACATCAGTGAGTGTTGATGGAAATTGGTGTCAGGGTCATCAATGAGAAACCAATACAGCAATCCGGGtagactgtccctttaaatgagcCCAGGCatgtataagaaaaaaatatacataatcaAATATCC

Function

symbol description
gmpr Predicted to enable GMP reductase activity and metal ion binding activity. Predicted to be involved in purine nucleotide metabolic process. Predicted to act upstream of or within nucleotide metabolic process and purine nucleobase metabolic process. Predicted to be part of GMP reductase complex. Orthologous to human GMPR (guanosine monophosphate reductase).

GO:

id name namespace
GO:0006144 purine nucleobase metabolic process biological_process
GO:0006163 purine nucleotide metabolic process biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:1902560 GMP reductase complex cellular_component
GO:0003920 GMP reductase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-48 Predicted to enable GMP reductase activity and metal ion binding activity. Predicted to be involved in purine nucleotide metabolic process. Predicted to act upstream of or within nucleotide metabolic process and purine nucleobase metabolic process. Predicted to be part of GMP reductase complex. Orthologous to human GMPR (guanosine monophosphate reductase).

Ensembl:

ensembl_id ENSDARG00000016160

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029401 True 3052 mRNA 0.46 9 32472996 32487469

Neighbor

gene id symbol gene type direction distance location
XLOC_014901 CR382336.1 coding downstream 142366 32330513 ~ 32330630 (-)
XLOC_014900 pag1 coding downstream 322782 32048379 ~ 32150214 (-)
XLOC_014899 znf704 coding downstream 430891 31956534 ~ 32042105 (-)
XLOC_014898 zbtb10 coding downstream 572103 31878454 ~ 31900893 (-)
XLOC_014897 hey1 coding downstream 670700 31797567 ~ 31802296 (-)
XLOC_014903 fuca1.2 coding upstream 1103 32488572 ~ 32493866 (-)
XLOC_014904 fuca1.1 coding upstream 7950 32495419 ~ 32500373 (-)
XLOC_014905 zbtb8b coding upstream 18278 32505747 ~ 32518556 (-)
XLOC_014906 zgc:91944 coding upstream 84258 32571727 ~ 32600868 (-)
XLOC_014907 hpca coding upstream 134708 32622177 ~ 32710922 (-)
XLOC_014711 CR382300.3 misc downstream 12744241 19728690 ~ 19728755 (-)
XLOC_014888 BX465206.1 non-coding downstream 1389023 31079326 ~ 31083973 (-)
XLOC_014885 BX927219.1 non-coding downstream 1507335 30962723 ~ 30965661 (-)
XLOC_014883 NA non-coding downstream 1637899 30831190 ~ 30835097 (-)
XLOC_014880 NA non-coding downstream 1750492 30721012 ~ 30722504 (-)
XLOC_014908 CR318628.1 non-coding upstream 162198 32649667 ~ 32649781 (-)
XLOC_014919 BX957357.1 non-coding upstream 884895 33372364 ~ 33372694 (-)
XLOC_014920 NA non-coding upstream 1295314 33782783 ~ 33786703 (-)
XLOC_014924 CU928445.1 non-coding upstream 1490409 33977878 ~ 33977994 (-)
XLOC_014927 NA non-coding upstream 1700723 34188192 ~ 34230285 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_07209423_07216395 GMPR coding CI01000054 null 7209423 ~ 7217210 (+)
bowfin (Amia calva) AMCG00021785 gmpr,LOC108425204,LOC108257268,LOC103024228 coding CM030130.1 CM030130.1 29815490 ~ 29830397 (+)