Item | Value |
---|---|
gene id | XLOC_014904 |
gene name | fuca1.1 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007130.7 |
NCBI id | CM002903.2 |
chromosome length | 48449771 |
location | 32495419 ~ 32500373 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
fuca1.1 | Predicted to enable alpha-L-fucosidase activity. Predicted to be involved in fucose metabolic process and glycoside catabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in lysosome. Is expressed in several structures, including EVL; epidermis; periderm; sensory system; and yolk syncytial layer. Human ortholog(s) of this gene implicated in fucosidosis. Orthologous to human FUCA1 (alpha-L-fucosidase 1). |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0016139 | glycoside catabolic process | biological_process |
GO:0005975 | carbohydrate metabolic process | biological_process |
GO:0006004 | fucose metabolic process | biological_process |
GO:0005764 | lysosome | cellular_component |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0004560 | alpha-L-fucosidase activity | molecular_function |
GO:0016787 | hydrolase activity | molecular_function |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | molecular_function |
id | description |
---|---|
ZDB-GENE-030131-7434 | Predicted to enable alpha-L-fucosidase activity. Predicted to be involved in fucose metabolic process and glycoside catabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in lysosome. Is expressed in several structures, including EVL; epidermis; periderm; sensory system; and yolk syncytial layer. Human ortholog(s) of this gene implicated in fucosidosis. Orthologous to human FUCA1 (alpha-L-fucosidase 1). |
ensembl_id | ENSDARG00000035890 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00029403 | True | 1775 | mRNA | 0.46 | 8 | 32495419 | 32500373 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_014903 | fuca1.2 | coding | downstream | 1553 | 32488572 ~ 32493866 (-) |
XLOC_014902 | gmpr | coding | downstream | 7950 | 32472996 ~ 32487469 (-) |
XLOC_014901 | CR382336.1 | coding | downstream | 164789 | 32330513 ~ 32330630 (-) |
XLOC_014900 | pag1 | coding | downstream | 345205 | 32048379 ~ 32150214 (-) |
XLOC_014899 | znf704 | coding | downstream | 453314 | 31956534 ~ 32042105 (-) |
XLOC_014905 | zbtb8b | coding | upstream | 5374 | 32505747 ~ 32518556 (-) |
XLOC_014906 | zgc:91944 | coding | upstream | 71354 | 32571727 ~ 32600868 (-) |
XLOC_014907 | hpca | coding | upstream | 121804 | 32622177 ~ 32710922 (-) |
XLOC_014908 | CR318628.1 | coding | upstream | 149294 | 32649667 ~ 32649781 (-) |
XLOC_014909 | nt5c1aa | coding | upstream | 266050 | 32766423 ~ 32804535 (-) |
XLOC_014711 | CR382300.3 | misc | downstream | 12766664 | 19728690 ~ 19728755 (-) |
XLOC_014888 | BX465206.1 | non-coding | downstream | 1411446 | 31079326 ~ 31083973 (-) |
XLOC_014885 | BX927219.1 | non-coding | downstream | 1529758 | 30962723 ~ 30965661 (-) |
XLOC_014883 | NA | non-coding | downstream | 1660322 | 30831190 ~ 30835097 (-) |
XLOC_014880 | NA | non-coding | downstream | 1772915 | 30721012 ~ 30722504 (-) |
XLOC_014919 | BX957357.1 | non-coding | upstream | 871991 | 33372364 ~ 33372694 (-) |
XLOC_014920 | NA | non-coding | upstream | 1282410 | 33782783 ~ 33786703 (-) |
XLOC_014924 | CU928445.1 | non-coding | upstream | 1477505 | 33977878 ~ 33977994 (-) |
XLOC_014927 | NA | non-coding | upstream | 1687819 | 34188192 ~ 34230285 (-) |