XLOC_014920


Basic Information

Item Value
gene id XLOC_014920
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 33782783 ~ 33786703 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030295
GCAGGTATGAACATATTTATTACACAGTAAAGAGTACAACAATACCAGAATCATACTGCAAAGATTCACAGACTGACAGACCATTTACtacagcccccccccccccaaaacgagagaataaaataaagaaaacagatTAAACAAGAAACAGACATAGTAGACTCAAAAAACCCTAGAGTATACTGAAACGGTGTGATGACGGACCACACCCTCCCAGCCCACCTGTAACCTGTGGTTCTTGTTTCCGTTAAGTATTGCACAACGACTTTCatgagtttaatttttttttcacaataaaatttTCGAACAACCCTATCACTTCCCATCCTGAACCCACCCCACCGAGTCATTTCACTTTATGTTCATTTATCATCCCAAAGTTGAATTCACTTTAcaaactgaagaaagaaaaaaaagcgaAACAAAATAGCGCAAGAACACCTGGCAAAAAAAGGCATGCGCGTATTCACCAACTGTTCGATCAGGTTTGGTGCAAATTCCCAATAAACACAAACCTAAATGACACCAACATGTGGCCAAGCGTATCTCACAACAGAAGACGGAAACTGGGGGGAAAGGGGGTGCAGGAGAAGAGAAGGGCAATAGGAATATATCACATTTCTCATCTTTGACCATTACTGAATTATAGTGTATATCAAATGAAGTCAACACTctgaaatattttctttttttactttgagTCGACTCAAAGTGATTTGTACGCATGATAAacttaaaattaactttttttttttttcattttacatatCCTAtccattaagcttttttttttttctcatgaggTCTGCATTGTTACCAAGTAGTGATATGGTTTGCAGCTatatgagcttttaactttgggTTTAAGTCCTGTTCTCATGTGCCCATTTGGTTTGACTAGACCAGTGTCCGCTCAGCGACTGGTGCTCCTAACGTGCTGTCAGAGGTAGAGTGAGACTTTTTGCCACAGAGGAAAAAAGGTTGTAGCAAAACAGACGTCCTAGAGTGGGAAGGAGAAGAAGGAGATTCTTAACGCTTTATCCGTGCTTATTTATTCAGGTCACCCTGATTGAACTCTACACTAACTGCAtgtatttcaaaaatagtttcaaGACAGCTCAGCTGGCAGATTCTGTGGAGATGTGGATGGGTGTCTTACACCCTTGATTTTTGGATTAATAACCGTAGCATACCGGAGGAGGCCGGAAGTGCGTCCAGAGCCAGCCTCTTCTCCTAAGAGGTCAAAAGCACAGCGTTTAGCACCATGAGCCAgctaatgcctcattcacactagcagcgactttgtagctgcctgtcgctatACCTGCAAACGCAGGTTTGAGCACGGAGAATACAACCAGCCTTTGAGCGAGCAGAGAgatctactggtgctcctattggctttCGCTCAAGAAAAATCGATCTTCATTTGCAtgaagttgaaggattctcaactttgtcgcatCTCTTGACTCTCCCACCTGGTCGCCAACAATTGCTGTTGCTCGACTAGGTCGCCAGAATTCGCCCACTCTCTGTTGAAATAAGTGGTGGCCTCTTCGCTTAGCTGCTGCGAGTCGCttatagtgtgaatgaggcttaagtGCTCGATCAGACCCCTCTTTCTCTTAAGCCAACAACGAGGTTGTGTCGTTTAGTTTCTCACATGGCTTTTAATCTTGAGCTGAAACACTTGGTTTGGTTATGCGCCGTTCATAAACAAGAAGAGCCTTTTGGGGAGACGAATCCAAACGATACGGAAGGAAAAAAGGACGACATTGAAACAGTTGTGAAAACCTCGCCACGGAGGATCTAGATGTGGGATCCACCTTCCGGTTATTGCTCAGTCCTTCGGACTACATCGTCCACACATCAAACCTTCTTTCCTCAGGAACTGCTACATGGTTTTGAGTGGCTCCTCCTCCCTATGAGCTGAACAGCCCTGGCTCTGGACAGGGGAGAGTTAAAGGTTTTGGAATGGAAACATTGCTCAATGTGGTTTCCCCTGATAAACACGTGGAGAAAACAAGAATGAGTCTCTTTTGTCATGTTTAAATCTTGAATAAAATCAGGTTTTGGTCCTTCATGTCTGTCTTTGGCTGTCTTCCATGTTATGTCTTTTGTAATACTGTGTATCCTGGTGCTCTGCAGTGTTAAAGCTGTCTGTTTTTCACCTCTGCATTTGGAAAGTTAGTTTCTTAGTGTCTTTTTtgtacactttttctttttttttgtagaaaacaaaacaacatatacCATAGCGTTCAGTATGCATGTGCATGCGCTGTCCTTAACTATTCAAAGCAAAATGTTTCGAAAAATGTGAACAAAAGCAGATCGTGGTGATACTTCTGTtttgtcttttgtcttttttcgcTTTTTTTCATAGGTTTTATCCATTTTTtaacaagaaaagaaaatcacAGATATGTAACGAAGCACTCCAAAGAAAACCTATGAGGTGAGGCTCCCTATGGAGAAAACAAAAATGCCAAAAGAAGCATGCTGAGAGAAACCGTGACAGTGCAAATACATTTATGTACGTCCCATGTACAAAAACATTTATGTTAGCATTCCATGTAACATGCTAGTTCTCAGAAAAACATCTGAATGAGACCGAAGTAGCAGCTCTGAGAGATAGCGTTTGCCTTTCGAGGACAACGGGGGaaaagttttttcttcttcttagaGAACAACAAGGGGACTAGCACAAACACATACGAATAGAAAAGCAGCTTGCGAAAGAtagagagacggagagagagaaaacaagagaaaatatGTTCTTCCTTTTTGCACCTAGAAAGACTAAAAAGTTGTGACTGTGGTTTAAACTATTAATGCGTTGTCACAATTGTCCAGCACATGTACAATAAATAACCATTGGAGACGGCACAGGACACAAGTGTTTAACACAATGAGATCTAGAAGGGCAAAAAGAAGCAGAACGAGGACTGATGGCGGGACAGGAGAGAGCTCCAACAGCCAGTGATTTATGGGGAATTCCTCAGCCCTTTGCTTCCCAGCGGCTGTCACAGTGAGGTTCTGACAGTCCTGCACTGCGTTTTATTTCTCAGACCATTGACCTGGATATTATCTTGCAGAAGAGGGGCGAACATCTGCGTTCCTTCACAATCTGCTGCACATCTGCAGAACTGAGCGCGTGAGCCAGAAACGCCGTCTACTCCACCACATCTGACACAGATGCCCTTCATGGCAACGACGAACGTCGTGTTGACTTCTTTACAAGGAACGCTGTCTTTTTGTCCTAATAAAAGTCAGAGTCTTTGCTTACATCAGCTGTGAAGTATTTCCTTGGTTTTGTCATTTAAAGTGTCTTTAATGAGGTCAAATAGTTTCATATCCCAGCTACTGGATAAAGAGCTTTGAGAACGGAACAAAGGAGGAGGGGAaacccaaaaaaataaatgaaggagaGGTCGAATATACTCATCAAGAGGTCCCGGCTGTCTACTCCATTTGTCTTCTTATTTACAAGAATGCAAGAGAGccacaacaacaataaaagacATGGCCAACAGTCATCCATAATAGCTGTGGCATTAATAAAGGACAATGAGAATTTCAAACAAAGAATATCTTTGCGTTCTCTATCATGGCAAGTCAATATGACCCGAAATGGACCTCCTGTGGGTGATCGCTCAAAGTAAGTACAGTCTTCTCTCTTTGTTAGTGCGCTAGCTTTAGCATTTTGGAGCAAGTGAGGCAGGTGAGTCGGCTTGGACTCTAGCGCGGCGTGTTCTCCACGGTGGAGGGCGTGCCGGGTGTGGCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030295 True 3794 lncRNA 0.42 2 33782783 33786703

Neighbor

gene id symbol gene type direction distance location
XLOC_014919 BX957357.1 coding downstream 410089 33372364 ~ 33372694 (-)
XLOC_014918 nkd3l coding downstream 412512 33368152 ~ 33370271 (-)
XLOC_014917 fam92a1 coding downstream 507748 33258572 ~ 33275035 (-)
XLOC_014916 trib1 coding downstream 570760 33200266 ~ 33212023 (-)
XLOC_014915 klhl38a coding downstream 695537 33084066 ~ 33087246 (-)
XLOC_014921 si:ch73-302o18.2 coding upstream 42273 33828976 ~ 33835396 (-)
XLOC_014922 otud6b coding upstream 49736 33836439 ~ 33850219 (-)
XLOC_014923 elmo1 coding upstream 100886 33887589 ~ 34063567 (-)
XLOC_014924 CU928445.1 coding upstream 191175 33977878 ~ 33977994 (-)
XLOC_014925 rp9 coding upstream 287174 34073877 ~ 34089305 (-)
XLOC_014711 CR382300.3 misc downstream 14054028 19728690 ~ 19728755 (-)
XLOC_014908 CR318628.1 non-coding downstream 1133002 32649667 ~ 32649781 (-)
XLOC_014901 CR382336.1 non-coding downstream 1452153 32330513 ~ 32330630 (-)
XLOC_014888 BX465206.1 non-coding downstream 2698810 31079326 ~ 31083973 (-)
XLOC_014885 BX927219.1 non-coding downstream 2817122 30962723 ~ 30965661 (-)
XLOC_014927 NA non-coding upstream 401489 34188192 ~ 34230285 (-)
XLOC_014928 NA non-coding upstream 495183 34281886 ~ 34283008 (-)
XLOC_014929 NA non-coding upstream 874009 34660712 ~ 34687552 (-)
XLOC_014942 BX957241.1 non-coding upstream 1634132 35420835 ~ 35420951 (-)

Expression


Co-expression Network