XLOC_014927


Basic Information

Item Value
gene id XLOC_014927
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 34188192 ~ 34230285 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030296
TCCATCTTTCAGCCAGTCTGCGGTGTAAAGATATCCTATCGCTCACATAAgtgtttatttgatgttttttgatGCTCTCCTCTTCCTCTCGCTTCTCTTCCCCACTCAGGTCCAGTTTAACAGCTCTGCCCATCTCTCCCAGCGCGTTTACATCTAAAGCAGGCTTCTCGTAAACAGGTCTCTTCAGAAACTGCTCGTCCACATTTTTGTGCTCGTCTGGCACTTCTCTTATTTTCGCCAGTCCCACATCACTCTGCGTGTTCCTGTGAAATACTAAATAGCCCACTACAAAAGCACCGACAATGTACAGGATAAACTTGGAGCGACTCCGTCTGCCACATATTGCCATAATGTGTCCGTATCGTTCGGTTTCCTCAAACCGTTTCTGTTCAGTTTCATGAAGAGTTCAGAAAAAGTTCGCCCGGGTGAGAGGAGCTTGTTTTAAAAGTGCCAGATTTCATTTTAAAGTCGACTGAAGTGAAACAATCCAGGCAGAGAGAAAGTTTATTCTGTGGCTGAAGCCAAATTTGTTGAGGTGTAATCAATAGATCGACATGAACGAGTCGGCTGGTCGAGCCGGTTGCAGACGGGGAGGAGTTCAACCCACTGGCGGCGATTCGGACACTTTTTAGCGGAGGAGATTTGACATCAAAAACAATTGGGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030296 True 665 lncRNA 0.46 2 34188192 34230285

Neighbor

gene id symbol gene type direction distance location
XLOC_014926 si:dkey-184p18.2 coding downstream 71136 34091552 ~ 34117056 (-)
XLOC_014925 rp9 coding downstream 98887 34073877 ~ 34089305 (-)
XLOC_014923 elmo1 coding downstream 124625 33887589 ~ 34063567 (-)
XLOC_014924 CU928445.1 coding downstream 210198 33977878 ~ 33977994 (-)
XLOC_014922 otud6b coding downstream 337973 33836439 ~ 33850219 (-)
XLOC_014928 NA coding upstream 51601 34281886 ~ 34283008 (-)
XLOC_014929 NA coding upstream 430427 34660712 ~ 34687552 (-)
XLOC_014930 elp2 coding upstream 461360 34691645 ~ 34742440 (-)
XLOC_014931 ctnnal1 coding upstream 521402 34751687 ~ 34873566 (-)
XLOC_014932 sla1a coding upstream 683570 34913855 ~ 34927201 (-)
XLOC_014711 CR382300.3 misc downstream 14459437 19728690 ~ 19728755 (-)
XLOC_014920 NA non-coding downstream 401489 33782783 ~ 33786703 (-)
XLOC_014919 BX957357.1 non-coding downstream 815498 33372364 ~ 33372694 (-)
XLOC_014908 CR318628.1 non-coding downstream 1538411 32649667 ~ 32649781 (-)
XLOC_014901 CR382336.1 non-coding downstream 1857562 32330513 ~ 32330630 (-)
XLOC_014942 BX957241.1 non-coding upstream 1190550 35420835 ~ 35420951 (-)
XLOC_014948 NA non-coding upstream 2480213 36710498 ~ 36731093 (-)
XLOC_014949 NA non-coding upstream 2598666 36828951 ~ 37120328 (-)

Expression


Co-expression Network