XLOC_014928


Basic Information

Item Value
gene id XLOC_014928
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 34281886 ~ 34283008 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030297
GTCACATTGTGGAAAACTGGATGGATTTAGACTTCTTACATGCAAGTAATTAAATCCAGAAAGACGGTTCCTTGAGTTAAGTTACAGTAAAATAGCAATAGTTGAGCTACTGTACAGTGAACTGTAGAATTACTGAAAGTGTAAAGAtgctttacagtatatttattttatcttgctgTAAATGATAATGTAGGAACTTCTGTAAGCACATGACGTTTCAAACGTTAATTTACATAAAGACGATTATTCAATGTCTGACAGAAAAATATAGGAGGTATTGCAGATTAGCAAATTATAACATTAAACAGACGTCTGagtgatttgtttgtgttgatgtAGAATGCACTTTTGTCAATACAGCTTAGGTTAgatacatgtaatattaatacagcAATGTTTTCTTCTGTTCATTTGGTGATACATTTATGAAAGTATAATTTTGAGCACACAAATCACAGAGGTAACATGACTTGTCTGGTTGTTATAGAGAAGGAAGCACACATGTTTGTGTGTTAGCTGATGCAGAGTGACTGAACAAATGCTACcatcatatttgtttaatattgttgtttCAAACTGCTATTAcaacaatttatttaatgttgatttatatgCCATTTCTGGGCTGGAGCAGGACTTGCAAGGCAAGAAAACAGAGAAAACCTGAATTCAAAACATGAAGTAAGATCATGTTATTACTTCCAATTCAGAACTCAAATGAAACTCAAAAAGTGTGCTGTTAAATGACTTCTTTATTAAGAGCTTTGCAAAATCTGAAATGTCCTCAGACTGGTGTGTgcagtgatgatgatgaagaacagcagtgtgctgatgaagtaaatgtTGAAGATGCTAGTGCCATGGACAAGACCCTGCATCCCTCCACCTGCCTGCGTGTCCTCATCTGAGCCAGATGCTGGTGTGGTCTCTTCATCTTCAGTATGAATCGGTTTCTCAGGCATGGACAGCCTCACCTCACAACTCTGTTCCAGTCTGACTGCAGCACTGAGGGATGTGATGGCAAAAACAAGTGAAGTCCAGAAGTCCAGCATGCAGCAGAACATGGGGTTTTGTCTGAAATACATGATTGTTTGAATAAGTTTGAATAAAGCTTAGTTTCGTA

Function

GO:

id name namespace
GO:0009259 ribonucleotide metabolic process biological_process
GO:1902600 proton transmembrane transport biological_process
GO:0046034 ATP metabolic process biological_process
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0016485 protein processing biological_process
GO:0042773 ATP synthesis coupled electron transport biological_process
GO:0042775 mitochondrial ATP synthesis coupled electron transport biological_process
GO:0006119 oxidative phosphorylation biological_process
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen biological_process
GO:0022900 electron transport chain biological_process
GO:0022904 respiratory electron transport chain biological_process
GO:0006163 purine nucleotide metabolic process biological_process
GO:0017144 drug metabolic process biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0055086 nucleobase-containing small molecule metabolic process biological_process
GO:0019637 organophosphate metabolic process biological_process
GO:0006753 nucleoside phosphate metabolic process biological_process
GO:0019646 aerobic electron transport chain biological_process
GO:0009141 nucleoside triphosphate metabolic process biological_process
GO:0009144 purine nucleoside triphosphate metabolic process biological_process
GO:0009150 purine ribonucleotide metabolic process biological_process
GO:1901135 carbohydrate derivative metabolic process biological_process
GO:0072521 purine-containing compound metabolic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0015985 energy coupled proton transport, down electrochemical gradient biological_process
GO:0019693 ribose phosphate metabolic process biological_process
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0009199 ribonucleoside triphosphate metabolic process biological_process
GO:0009205 purine ribonucleoside triphosphate metabolic process biological_process
GO:0045333 cellular respiration biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0005746 mitochondrial respirasome cellular_component
GO:0005753 mitochondrial proton-transporting ATP synthase complex cellular_component
GO:0044429 obsolete mitochondrial part cellular_component
GO:0016469 proton-transporting two-sector ATPase complex cellular_component
GO:0044455 obsolete mitochondrial membrane part cellular_component
GO:0019866 organelle inner membrane cellular_component
GO:0045259 proton-transporting ATP synthase complex cellular_component
GO:0031966 mitochondrial membrane cellular_component
GO:0031967 organelle envelope cellular_component
GO:0031975 envelope cellular_component
GO:0070469 respirasome cellular_component
GO:0098796 membrane protein complex cellular_component
GO:0098798 mitochondrial protein-containing complex cellular_component
GO:0005739 mitochondrion cellular_component
GO:0098800 inner mitochondrial membrane protein complex cellular_component
GO:0005740 mitochondrial envelope cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism molecular_function
GO:0022890 inorganic cation transmembrane transporter activity molecular_function
GO:0015002 heme-copper terminal oxidase activity molecular_function
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism molecular_function
GO:0015077 monovalent inorganic cation transmembrane transporter activity molecular_function
GO:0015078 proton transmembrane transporter activity molecular_function
GO:0008324 cation transmembrane transporter activity molecular_function
GO:0004129 cytochrome-c oxidase activity molecular_function
GO:0016675 oxidoreductase activity, acting on a heme group of donors molecular_function
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030297 True 1123 lncRNA 0.37 1 34281886 34283008

Neighbor

gene id symbol gene type direction distance location
XLOC_014927 NA coding downstream 51601 34188192 ~ 34230285 (-)
XLOC_014926 si:dkey-184p18.2 coding downstream 164830 34091552 ~ 34117056 (-)
XLOC_014925 rp9 coding downstream 192581 34073877 ~ 34089305 (-)
XLOC_014923 elmo1 coding downstream 218319 33887589 ~ 34063567 (-)
XLOC_014924 CU928445.1 coding downstream 303892 33977878 ~ 33977994 (-)
XLOC_014929 NA coding upstream 377704 34660712 ~ 34687552 (-)
XLOC_014930 elp2 coding upstream 408637 34691645 ~ 34742440 (-)
XLOC_014931 ctnnal1 coding upstream 468679 34751687 ~ 34873566 (-)
XLOC_014932 sla1a coding upstream 630847 34913855 ~ 34927201 (-)
XLOC_014933 ndrg1a coding upstream 676959 34959967 ~ 34979837 (-)
XLOC_014711 CR382300.3 misc downstream 14553131 19728690 ~ 19728755 (-)
XLOC_014920 NA non-coding downstream 495183 33782783 ~ 33786703 (-)
XLOC_014919 BX957357.1 non-coding downstream 909192 33372364 ~ 33372694 (-)
XLOC_014908 CR318628.1 non-coding downstream 1632105 32649667 ~ 32649781 (-)
XLOC_014942 BX957241.1 non-coding upstream 1137827 35420835 ~ 35420951 (-)
XLOC_014948 NA non-coding upstream 2427490 36710498 ~ 36731093 (-)
XLOC_014949 NA non-coding upstream 2545943 36828951 ~ 37120328 (-)
XLOC_014951 BX571837.1 non-coding upstream 2944902 37227910 ~ 37228025 (-)

Expression


Co-expression Network