XLOC_014954


Basic Information

Item Value
gene id XLOC_014954
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 37569624 ~ 37571866 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030316
TTAATCTCTTagtttcttttagtttgattttgtAATGTGACAATCTCTGAAATAATAACTCATAAacgtaaaacacattttattctaCACATCTATATTTCTGAATATTTTCTTTGTTTCTGTCTTTGTGTGAGTCTTTCCAACTACAGTACATGACATGCTGAGCTGCCACAATGGCAAACATGGTAAGACTTATTATGTACTTATCTTAGATCAGAAATTTATTTCAACTTCTGTCAAATTTCTGAACATCttctatttctttttttgcatGAGTCTTTCCTTCTACATGATGTGGTTTGAGCTGACACAATGGCAAACATAGTAAGATCTTAGCAATATCTAAACCCTACGTAAATTAACTCGTAGATAATTTATGCATGAATGTTTTAATCTATAAAAAGCTGAAATATTTCTGTGTTTCTCCCTTTGCATGAGTCTTTTCAACTACAGCTCTTGACATGGTGTACAAATACAATAGTAAACACGGTAAGATCACATCAACATCAGAAACCTATATAAAATTGTGGTGAAATGCTGCATGAATACTTTATTTATACCAATCACTATATTTCTGAACATTTTCTTCTTTGTTTATTTCTCTGCACGAGTCTTTCCAACTACAAGACAAGGCGGCACAAAGGAAACATGATTTTCAACTCACAGTACACTACATGGCATGGTTTGAGCCACTACAATGAAACAGGGTAAACATGTCTTTCCAACTACATGACGTGGAGCCACAATGGAAAATGTGGTTAGAAAGATCACATCAACATCAGCAAGCAATGGGAACCTTAAGCTCTGTGTCAATATTTTATTCTGAATAAAGCATTATATTTCTGTACATTGTCTCCTTCGTTTCTTACTTTCCAACTACATGACATGGTTTAATGCATATAATTAat
>TCONS_00030317
AAATGTTTGTGTTATTTAGAAATTCACTTAATCTCTTAGTTTCTTTTAGTTTGTTTCTAAAATGTGATGATCTCTGAAAATTGTATAACCGTAAAACATATTATATTCTACAAATCTATATTTCTGAACATTTTCTTTGTTTCTGTCTTTGTGTGAGTCTTTCCAACTACAGTACATGACATAGTGAGCTGCCACAATATCAAACATGGTAAGACTTATTACATAACAACATCAAAACATGTTAACTAATGTAACATTTCTGAaaattttctgtttctttttttgcatGAGTCTTTCTTACTACATGACATGGTTTGAAACTCCACAATTGCTAACATGGTAAGACATATTACGTGACAACATCAGAAACATATATAAACTTGTGGTACAGTGCTGCgtgaatatttaattttaaaaaatcactgtTTCTGAGTGTTTTCTTTGTTTCTGGTATTGCATGAATCTTTCCAACTACATGACATGGTTTGAGCCGATACAATGGAAAGCGTGGTAAGATCTTATATCAGAAACCTATAAATGTgctgtattaatatttaattatggaAAATTCACAGCATTTCTgaacattttctttgttttttgtctttgtgTGAGTCTTTCCAGCTACAGTACATAACATGATTTGAGCATCCCCAATGGCTAACATGGTAAGACATATTACATGACAACAACAGAAACAAATATAGACTCATAGTAAAGTGCTGTgttagtattttattaaaataatcataataataaattcactacATCACtgattgttttgttcttgtttttgttatttgaGTCTTTCTATCTACTTGACATGGGCCAATGATCCAATAAGATGGCAAACATGGTAAGATCTTAATAACAACATCAGACACTTATATAAACGTGTGGTAAAGTTCAGCAAATGTTTGTGTTATTTAGAAATTCACTTAATCTCTTagtttcttttagtttgattttgtAATGTGACAATCTCTGAAATAATAACTCATAAacgtaaaacacattttattctaCACATCTATATTTCTGAATATTTTCTTTGTTTCTGTCTTTGTGTGAGTCTTTCCAACTACAGTACATGACATGCTGAGCTGCCACAATGGCAAACATGGTAAGACTTATTATGTACTTATCTTAGATCAGAAATTTATTTCAACTTCTGTCAAATTTCTGAACATCttctatttctttttttgcatGAGTCTTTCCTTCTACATGATGTGGTTTGAGCTGACACAATGGCAAACATATCTTTTCAACTACAGCTCTTGACATGGTGTACAAATACAATAGTAAACACGGTAAGATCACATCAACATCAGAAACCTATATAAAATTGTGGTGAAATGCTGCATGAATACTTTATTTATACCAATCACTATATTTCTGAACATTTTCTTCTTTGTTTATTTCTCTGCACGAGTCTTTCCAACTACAAGACAAGGCGGCACAAAGGAAACATGATTTTCAACTCACAGTACACTACATGGCATGGTTTGAGCCACTACAATGAAACAGGGTAAACATGGTAAGATATTAAATGACAACATCAGTAACCTATATAAACATGTGGTAAATCTATGAATGGAAAGCACTAACTTCCGGAataatttctttgtttttatctttGTCTGAGTCTTTTCTATCTAAATGACATGCTTTGAGCCACCAGTTTCAAACATGTCTTTCCAACTACATGACGTGGAGCCACAATGGAAAATGTGGTTAGAAAGATCACATCAACATCAGCAAGCAATGGGAACCTTAAGCTCTGTGTCAATATTTTATTCTGAATAAAGCATTATATTTCTGTACATTGTCTCCTTCGTTTCTTACTTTCCAACTACATGACATGGTTTAATGCATATAATTAat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030316 False 908 lncRNA 0.33 3 37569624 37570928
TCONS_00030317 True 1887 lncRNA 0.32 4 37569624 37571866

Neighbor

gene id symbol gene type direction distance location
XLOC_014953 NA coding downstream 591 37522577 ~ 37569033 (-)
XLOC_014952 ilf2 coding downstream 61053 37501652 ~ 37508571 (-)
XLOC_014951 BX571837.1 coding downstream 341599 37227910 ~ 37228025 (-)
XLOC_014950 cx39.4 coding downstream 415188 37153409 ~ 37154436 (-)
XLOC_014949 NA coding downstream 449296 36828951 ~ 37120328 (-)
XLOC_014955 NA coding upstream 5986 37577852 ~ 37578715 (-)
XLOC_014956 CR735126.1 coding upstream 65508 37637374 ~ 37637493 (-)
XLOC_014957 BX571820.1 coding upstream 456632 38028498 ~ 38028618 (-)
XLOC_014958 BX530058.1 coding upstream 490134 38062000 ~ 38062124 (-)
XLOC_014959 NA coding upstream 751409 38323275 ~ 38372998 (-)
XLOC_014711 CR382300.3 misc downstream 17840869 19728690 ~ 19728755 (-)
XLOC_014948 NA non-coding downstream 838531 36710498 ~ 36731093 (-)
XLOC_014942 BX957241.1 non-coding downstream 2148673 35420835 ~ 35420951 (-)

Expression


Co-expression Network