XLOC_014959


Basic Information

Item Value
gene id XLOC_014959
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 38323275 ~ 38372998 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030319
GCAGCACTCCAATTTGAGTGAAGAGTCCCAGTACAACCACCAGATGGCAGGCAAGAACAGCATAAGAAGTCGTGGAGGCCTGGAAGAGGTCTTCGTGTCTTTCTACAGATGTTTGTAAGAATCAAAGAGGCTCCACGGCAGAGAACAAAGAGCAAATGTCACGCCAGAGTCACTTACACAACCTGCAGATTTAGAGGGGACGACAAACAGGAAATGACGGCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030319 True 222 lncRNA 0.49 2 38323275 38372998

Neighbor

gene id symbol gene type direction distance location
XLOC_014958 BX530058.1 coding downstream 261151 38062000 ~ 38062124 (-)
XLOC_014957 BX571820.1 coding downstream 294657 38028498 ~ 38028618 (-)
XLOC_014956 CR735126.1 coding downstream 685782 37637374 ~ 37637493 (-)
XLOC_014955 NA coding downstream 744560 37577852 ~ 37578715 (-)
XLOC_014954 NA coding downstream 751409 37569624 ~ 37571866 (-)
XLOC_014960 smap2 coding upstream 14257 38387255 ~ 38419575 (-)
XLOC_014961 BX276085.1 coding upstream 91129 38464127 ~ 38464249 (-)
XLOC_014962 BX276085.2 coding upstream 91297 38464295 ~ 38464413 (-)
XLOC_014963 col16a1 coding upstream 100760 38473758 ~ 38611814 (-)
XLOC_014964 NA coding upstream 307901 38680899 ~ 38688614 (-)
XLOC_014711 CR382300.3 misc downstream 18594520 19728690 ~ 19728755 (-)
XLOC_014966 CABZ01048582.1 non-coding upstream 830620 39203618 ~ 39203735 (-)
XLOC_014967 CT583726.2 non-coding upstream 1054182 39427180 ~ 39579002 (-)

Expression


Co-expression Network