XLOC_014975


Basic Information

Item Value
gene id XLOC_014975
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 40323961 ~ 40328584 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030327
atatatatatatatatatatatatatatatatatttactcaaCTTTCATCCCACATACTGCACTTGACTCGAATCAAGTTGAATCAActaaaaaagctctgcagcaagttgccttacgattttaagttgagtcaacatttgtttttgtttttttacagtgtggttatgaaaaaataacgaagagaccacttgaaaatgaTCCGTTTGTCTTGAATTATTAACTAAGGGTTTGAGATGCTATTATTTGTTTGATTCTATAATAGTGTGAACATATTTCTTCTAAATTTCATATTGTCATGCAaggttttttttcagaaaataaaaggtcagaataaatattttcatttattgtaattgaaaaaaatgttgttattccATCAGATATTGAAGGTAAAACACTGATATTGTGTGGTCTAAAAAGAAATGAACATTTCATGtctttatgcaaaaaataaataaaagttctaAGTgacattttgaattttaatttgggaaatatttaatcagtagtctacagcagtgtttctcaaccacgttcctaaaggaccaccaacactgcatgtttccgatgtctcctttgtctgtcacacccattacatgtctttcagtctctgctccAAGCTGATGATctgtgtttggttaagaagacatgaaaaatgtgcaaagctggtggtcctccaggagtgtggttgagaaacactggtccaCAGAATAAAAAAGTAGCCAAACAGATAACTATCTGGACTGGACATTTTCAACTGGTCTCCTCATATTTTTACATAGCAGCGTTTTGGCTTCCATTATAAAGGTTTTTGTAAAGTCATTTTGGGTGAATTGTGCCTTTGACTGTGTGAATGTGTTGTAGAACTACAGTGGCTGTCTaaaacgtctcatccaaaaacTTCTATCTGGTTTCACCAGGTTCATTTCTGAAGCagcttccttccttccctccacTTTTTCACCATTTGCTAAACACAAAAGGCACTTAATGGTCTACAGAGACCCATTTAGCAGATAATACAGTTTGATACACATATTGTGTTGATCTGTGCAGACAATTAAGAGATAGTTTCACCCCCCAAAATTAACAATTGCTTTAAATTTATTTACCTTCAGGTCACCCAAGATCAGTGGTGGAGGCAAGGGGGTAGttgaagacaaaaaataaataaataaatacattttaaaaagggggTGGGGTGTGGGGGGTTGTGAatcagacgaaagtgaagaagtGAAGAGGAGGTGGCAGTGTAGTAGTAGAAAAAAGTAGGGGGGGGGTGGTAGTTGCAGACGAAACTGAAAagcagaggtgtagttgcaaacaAAAGTGAAGGGGGGGTACTTGCAGACAAAAAAAGCGGAAGGTAGTTGCAGACAAAAGTGAGGGGGGATGGCAGTGTAATAGTGGACAAAAGTAAAGAGGGGGTGTAGTTTCAGATGAAAATTAAAAGTAGAGGGTAGTTGCAGACAAAAGTAAAGGGGGTGGCAGTGTAGTAGTGGACAAAAGTAAACAGAGGGGGTAGTTGCAGACAAAACTGAAAAGTGGAAGGGTAGTCACAGACAAAAGTAAAGGGGGCGTACTTGCAGACAAAAAAATGGAGGGTAGTTGCAGACAAAAGAGGGGGGGGCAGTGTAGTAGTGGACAAAAGTAAAGAGGGGTGGGGGTAgtttaagatgaaaaaaaaacgcAGAGGGTAGTCACAGACAAAAGTAAAGGGGGTGGCAGTGTAGTAGTGGACGAAATTGAAGAGAGGGATAGATGCTGATGAAACTAAAAAGTGAAAGGGTAGTCGCAGACAAAAGTGAAGGGGGGGTGGTTGTGTAGTAGTGAACAAAATTGAAGAGAGGTGGGGTAGTTGCAGACAAAACTGAAAAAAGGAGGTAGTCGCAGACAATAGTCAAGGAGGGTAGCAGTAGAGTCGCTGATGAAAGTGATGAGGGGGGTGGTGGTGGAGTCGCagacaaaaataaacaagggtGGTGATGGCCCTGGAGTCCCGGACAAAGTGAAGAGCGAAGGGGGGTTGGGGGAGTCAGACGAAAATGATAGAGGGGACAGGTGACGGTGTAGATGTGGACAAAAGTGAATGATGAGTGGGGGTGGGTTTAGTAGACAGGAATGAAATAATAAGCGGAAGGGGGCAAAGGGAGAGGGTTGGGATTTGTTGCGGATGAAAGTGATGAGTGGGGGGTGGGGTTAGAAGTTGGGAATGAAAGAAAAGAGTGGGAAGGGGGAGGAGGTTGCGGTTGGTCGCAGACGAAAGTGATGAGTGGGAATAGGGTTAGTAGTTGGGGATGAAAGTAAAGAGTGTTGGGAGGGAGGGGGTTGGGGTtagtcgcggacgaaagtgatgAGTGGGGATGGGGTTAGTAGTTGGGGATAAAAGTAAAGAGTGTTGGGAGGGAGGGGGTTGGGGTtagtcgcggacgaaagtgatgAGTGGGGATGGGGTTAGTAGTTGGGGATGAAAGTAAAGAGTGTTGGGAGGGAGGGGGTTGGGGTtagtcgcggacgaaagtgatgAGTGGGGATGGGGTTAGTAGTTGGGGATGAAAGTAAAGAGTGTTGGGAGGGAGGGGGTTGGGGTtagtcgcggacgaaagtgatgAGTGGGGATGGGGTTAGTAGTTGGGGATAAAAGTAAAGAGTGTTGGGAGGGAGGGGGTTGGGGTTAGTCACGGACGAAAGTGATGAGTGGGGATGGGGTTAGAGGTTGGGGCTGATGTTTggcaaaaaagaagatatttgaaaggttgtaaacttgtaaccattgacttcaatggtATTTATTTCCACCTACCACAGAAGTCCATAATTACACGTTTTGagcttacttcaaaatatctgctttactACTTTAGTAGAAAGAGTGGTTCCATTTAGAACCATTTGATGGCGAGTAAATAGTaagcaaataataatttttgggtgaactgtccctttaaaagtgAAATGGAAGGATGTAGCATAGTGTGTTTATACAATAAAGGACCTGGAATTACAGGATAACACATTACTCTCCGAGCCTCGAACGAATCTCACAACCTGACCTCCAAACCTAACACTCTCCAACTCTATACAGCTACTTTTACTAGACTTTCAGCTACTCTCTCATACACAGATTTCTATAACCAATCTTATTTCTGCTCTAAAGCAAACCCTAAAGTCAACATGCGACCATCCTTTCAACTACGTCTCGGCACTAAATCCCTGAAGGCAGGGTGCAGACTGTTTGGTTTACATCGACAATGTTTTCTACAACAACCTACACCTTCAAGTTCACTAAAATTAAgggtaacattttaaaatgagggTCTATTAGTTAAGATCAATGTATTAACAAACATAAACATGAACAATAATCACAGCATTTAataagttcaacatttactaatgcatccaAAGTCATAAGCACAAGAACTATTTTCAGTAAATAGCAttagcaaagatgaataaatactgcaatacacttattgttcaatgtttgtttaggttagtaaatacattataaCTAATAAACCACTATTTTAAAGTGTCACCAAATTAAGacaaaagccaacaaataaaaatgtcaacaatcaACACTGACATTTCAAAATAAGTGAACAGGATGTGGAACTCATAGTAATGATACAAAAACAATTACACTATAACATTGTTGCTAAATAGTGCTTCAGAACATTAAATAAAGCACTATAACTCTGCGTGTTCATAGTTATGCAGTCTTCAACCCCCCCCAAAACCCCCCTAAAATGCGTATCAAACTGCAGTAATCCTCATGAATCCGTCCTGATCGGCGAAAGTGTGAATTGAAAGCGATTACATATTAAGAGGTTCCGTTCAACGGGCCTGAACTTGCAGTAGTCGCTGTTCTGCTTGTAATTCCTCAATCCTGTTTGGGTCCAATGTTAAATCCATCTTCATGGCAGTGATGTGCTGCTAAAACTTAGTACATGTAGACTTGCGTTCATGAGAACAGATGATCTCTGGCAGTGTGGTGAACTGAACAAAGCCCAGACGAGCAGCTTCTGATCCTGTGCGGATGATTAGTAGGCAGCATCTGGTTGGGTGGCAGTAGTGAGGGCGAAAGGAAAACCTGACGGACCGATATTTTTGCGACGGTGATTTGTTAAAAGCAGCATGTGACGGCGTTTTGCTGTGGAAGACGAGTTTGTTTGTGTGGCGGCAGGTGTTTTAGGCGGCTCTCTCCTCCAGGGAGGGCTTTTTGCTGGGGAAGGGCTGAGCGTACAGGCTCTTGCTGGTGCTGTCCAGACTCTGGAAGTACAGGTGAGACAGTGCATCGTAAGCTGATATCCTTCTGGAGGGGTTGAAGGACAGGAAACGCTGTGTGTTGAGAGAGATGAGAAGAATAAATGACTATTGCATGGGATATTTGTCATATTATTGATATTGATATTATTGTAGTTGTTGGTTTAATAGTGTTGTCTTGTGTGAGATAACAGTATTAAGTAttataagaagcattttctagacaagtaataCATCTTTTATATTTATTCCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030327 True 4529 lncRNA 0.41 2 40323961 40328584

Neighbor

gene id symbol gene type direction distance location
XLOC_014974 grn2 coding downstream 124863 40196462 ~ 40199098 (-)
XLOC_014973 grn1 coding downstream 131712 40186677 ~ 40192249 (-)
XLOC_014972 efcab1 coding downstream 137633 40182641 ~ 40186328 (-)
XLOC_014971 illr4 coding downstream 148161 40167363 ~ 40175800 (-)
XLOC_014970 NA coding downstream 565101 39754692 ~ 39758860 (-)
XLOC_014976 CT027724.1 coding upstream 307988 40636572 ~ 40636691 (-)
XLOC_014977 calcr coding upstream 388391 40716975 ~ 40826024 (-)
XLOC_014978 dre-mir-489 coding upstream 452584 40781168 ~ 40781271 (-)
XLOC_014979 tfpi2 coding upstream 519525 40848109 ~ 40855106 (-)
XLOC_014980 bet1 coding upstream 571326 40899910 ~ 40906161 (-)
XLOC_014711 CR382300.3 misc downstream 20595206 19728690 ~ 19728755 (-)
XLOC_014969 NA non-coding downstream 721270 39595429 ~ 39602691 (-)
XLOC_014968 CT583726.1 non-coding downstream 734806 39588596 ~ 39589155 (-)
XLOC_014967 CT583726.2 non-coding downstream 744959 39427180 ~ 39579002 (-)
XLOC_014966 CABZ01048582.1 non-coding downstream 1120226 39203618 ~ 39203735 (-)
XLOC_014981 NA non-coding upstream 581191 40909775 ~ 40985319 (-)
XLOC_014982 NA non-coding upstream 592568 40921152 ~ 40922192 (-)
XLOC_014987 NA non-coding upstream 1117010 41445594 ~ 41468979 (-)

Expression


Co-expression Network