XLOC_014996 (si:ch211-191i18.4)


Basic Information

Item Value
gene id XLOC_014996
gene name si:ch211-191i18.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 42235739 ~ 42238440 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029548
GAGATGTGTCAACAGACTTGACATCATTATAAATTCAGCTAAATGTCATAAAGGGAGGGATGAGTCGTATAAAGAGAAATCTAGCCACAGAATGGCAGCGATTAATCCTGGAAAATCTCATCAAACCGCTTTCATCAAGGATGATCAACAATCTCCTGTGAATGACGTAGAAGGTCTGAACCAATAAACCCGACGAGTCTTTACGGGAAAACACTTACCAGACTCACAACCAGAGCAAGCACTAGCCTAATACACGTGACTAGTTTGAAAATATCATGTCAAATTTATCAATACTTGTCGTCGTGCTGCACTGTGCtgtatatatttactttaaaaccAGTGGCGTCGAATCAAGACCGCCGGATTACCAACCAACTGGATTGTTTATCGACGACCCGACGGAAGCGACAAGAGATGTGGCAAATTTTAAAGACAACCTTCAGAGACAAGTCGTACCCATTTTGAAGAAAAAGTTCAACCGTTTGCCAGGTGTTTGTAGACGTCTGAAGAGGAGGAGGATAACAATTCTGTGCAACACTGAAAAGTTCTGTTCTGCGATGAAATATTCTCAGCATGGCCACATCTGCTCCTGCCCAAAACGATCAAAGTGCTCTCATTTCTTTTTATGGACATTGTGACCTCACCCTTTTCCCCTCCCTCTTTAAATCAAATCACAAAATGCATACGAGTCATTGATGAAACAATCACGTGACTACAGAAAATTCATTTTCCTATTTATTCCTCAGTTTATCAACAGAGGACAGGAAGTGTCACACATCTTTCATAAAAatacactgtttacattttaggTACATCAGTAAAGTTGACTACAGGACAAAAACTGGACCAAATTCACATGGTTTCTTTCATAAAGTGTggagtttaaataaaataaccaccTATTGTCCTTACCATACATGTATCATTTTATCAAACCAATccttattgtaaataaaaatgtacgtCTATACCCAAAA
>TCONS_00029549
AGACTGCAGATCGTTCGATAACCGTACAATGCGCTGTTTATTTCAGACAAGAGATGTGGCAAATTTTAAAGACAACCTTCAGAGACAAGTCGTACCCATTTTGAAGAAAAAGTTCAACCGTTTGCCAGGTGTTTGTAGACGTCTGAAGAGGAGGAGGATAACAATTCTGTGCAACACTGAAAAGTTCTGTTCTGCGATGAAATATTCTCAGCATGGCCACATCTGCTCCTGCCCAAAACGATCAAAGTGCTCTCATTTCTTTTTATGGACATTGTGACCTCACCCTTTTCCCCTCCCTCTTTAAATCAAATCACAAAATGCATACGAGTCATTGATGAAACAATCACGTGACTACAGAAAATTCATTTTCCTATTTATTCCTCAGTTTATCAACAGAGGACAGGAAGTGTCACACATCTTTCATAAAAatacactgtttacattttaggTACATCAGTAAAGTTGACTACAGGACAAAAACTGGACCAAATTCACATGGTTTCTTTCATAAAGTGTggagtttaaataaaataaccaccTATTGTCCTTACCATACATGTATCATTTTATCAAACCAATccttattgtaaataaaaatgtacgtCTATACC

Function

symbol description
si:ch211-191i18.4 Predicted to enable neuropeptide hormone activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; adult feeding behavior; and negative regulation of appetite. Predicted to be located in extracellular space.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0032099 negative regulation of appetite biological_process
GO:0000186 activation of MAPKK activity biological_process
GO:0008343 adult feeding behavior biological_process
GO:0005615 extracellular space cellular_component
GO:0005184 neuropeptide hormone activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-15 Predicted to enable neuropeptide hormone activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; adult feeding behavior; and negative regulation of appetite. Predicted to be located in extracellular space.

Ensembl:

ensembl_id ENSDARG00000095328

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029548 False 977 mRNA 0.39 3 42235739 42238440
TCONS_00029549 True 611 mRNA 0.37 2 42235744 42238003

Neighbor

gene id symbol gene type direction distance location
XLOC_014994 CU896644.2 coding downstream 62511 42173114 ~ 42173228 (-)
XLOC_014993 trioa coding downstream 190367 41841147 ~ 42045372 (-)
XLOC_014992 NA coding downstream 504760 41723487 ~ 41730979 (-)
XLOC_014991 chrac1 coding downstream 716788 41515759 ~ 41518951 (-)
XLOC_014990 NA coding downstream 722481 41512742 ~ 41513258 (-)
XLOC_014997 cart4 coding upstream 3090 42241530 ~ 42244358 (-)
XLOC_014998 si:ch211-191i18.2 coding upstream 24633 42263073 ~ 42291355 (-)
XLOC_014999 plekho1a coding upstream 128846 42367286 ~ 42391390 (-)
XLOC_015000 vps45 coding upstream 158847 42397287 ~ 42416696 (-)
XLOC_015001 zgc:153441 coding upstream 179787 42418227 ~ 42424599 (-)
XLOC_014711 CR382300.3 misc downstream 22506984 19728690 ~ 19728755 (-)
XLOC_014989 NA non-coding downstream 729255 41493777 ~ 41506484 (-)
XLOC_014987 NA non-coding downstream 766760 41445594 ~ 41468979 (-)
XLOC_015004 NA non-coding upstream 280137 42518577 ~ 42524909 (-)
XLOC_015011 CR749752.2 non-coding upstream 356828 42595268 ~ 42595384 (-)
XLOC_015013 BX324146.2 non-coding upstream 439924 42678364 ~ 42678480 (-)
XLOC_015014 NA non-coding upstream 447466 42685906 ~ 42688192 (-)
XLOC_015015 BX324146.1 non-coding upstream 604669 42843109 ~ 42845206 (-)

Expression


Co-expression Network