Fish Transcriptome and Expression Database

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model fish

XLOC_015011 (CR749752.2)

Basic Information

Item	Value
gene id	XLOC_015011
gene name	CR749752.2
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007130.7
NCBI id	CM002903.2
chromosome length	48449771
location	42595268 ~ 42595384 (-)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029578
TGCCacagtcatatcaccctgcagccactgagagtggttactcactgaagctaagcagggctgagcttggtaagtacctggatgggagaccacatgggaaagctgttagagaggcca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000106315

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00029578	True	117	rRNA	0.53	1	42595268	42595384

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_015009	sytl1	coding	downstream	6758	42573724 ~ 42588510 (-)
XLOC_015008	zgc:103438	coding	downstream	21971	42567539 ~ 42573297 (-)
XLOC_015007	si:dkey-228a15.1	coding	downstream	28709	42559143 ~ 42566559 (-)
XLOC_015006	si:dkey-267n13.1	coding	downstream	37712	42553029 ~ 42557556 (-)
XLOC_015005	zgc:123103	coding	downstream	43930	42547699 ~ 42551338 (-)
XLOC_015012	susd5	coding	upstream	34151	42629535 ~ 42651615 (-)
XLOC_015013	BX324146.2	coding	upstream	82980	42678364 ~ 42678480 (-)
XLOC_015014	NA	coding	upstream	90522	42685906 ~ 42688192 (-)
XLOC_015015	BX324146.1	coding	upstream	247725	42843109 ~ 42845206 (-)
XLOC_015016	cyhr1	coding	upstream	323895	42919279 ~ 42928979 (-)
XLOC_014711	CR382300.3	misc	downstream	22866513	19728690 ~ 19728755 (-)
XLOC_015004	NA	non-coding	downstream	70359	42518577 ~ 42524909 (-)
XLOC_014994	CU896644.2	non-coding	downstream	422040	42173114 ~ 42173228 (-)
XLOC_014992	NA	non-coding	downstream	864289	41723487 ~ 41730979 (-)
XLOC_014990	NA	non-coding	downstream	1082010	41512742 ~ 41513258 (-)
XLOC_014989	NA	non-coding	downstream	1088784	41493777 ~ 41506484 (-)
XLOC_015018	CU207343.2	non-coding	upstream	366711	42962095 ~ 42983687 (-)
XLOC_015020	CU207343.1	non-coding	upstream	433998	43029382 ~ 43030888 (-)

Expression

Co-expression Network