XLOC_015025 (gpr186)


Basic Information

Item Value
gene id XLOC_015025
gene name gpr186
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43547465 ~ 43552252 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029591
AAACGAGCAAAAACATCGAGCAAGAGTTTCATCTTTAAGAGCTGGATTTGCACCTGCGAGGACGCCCGTTGTTCAGCAGGGCTGAAGATATTTCACAAGATCCTCAGTTGGATGGTGGAGTGAAGACTGGTCGTTTTTGCAATCTTCTACATCTTCCTAATGGACCAGAACAGCTCTGAAGTGGGCTTAGAAGTCATCTTGGCTATGAACCAACTCCTAGACCTCCCGCCCTCCCAAATGCCCCCTAAACCCCTGGAGGCCTCCGTCATGACACCGTGGGACATCACCTTGTGTGTATCCGGAGTGTTGATTTGCTGCGAGAATGCAATTGTAGTGGCCACCATTTTTTCCTCATCATCTCTGCGTGCGCCGATGTTCTTGTTGATTGGCAGCCTGGCATGGGCGGACTTCCTGGCTGGGGTGGGGTTACTTTTGCACTTCCTGTCTCGCAGATGTGTGTATTCAGAAGCGCTAGAACTGGGCAGTGTGGGTTTATTAGTGAGCGCTCTAAGTGCATCGGTGTTCTCCTTATTGGGGATCACTCTGGACAGGTTTTTGTCTCTACATCACGCGCTGACCTACGGATCCcagcgcacacacactcaaacgcGCTGCGCCCTGGCCGTCGGATGGACTCTTGCTGGTCTACAAGGTGCACTTCCGGCTTTAGGGTGGAACTGTCTGCATGATGGAGATTCCTGTAGTGTGCTTCGACCTTTGACCCGAGTGCACTTAGCCACCCTGTGCGGTGGATTCCTGCTAACGTTAGCATTGCTGCTGCAGCTGAATGCACGCATCTGCCGGGTCGTGCTCCGCCATTCTCATCAAATCGCCCTGCAAAGGCACACACTCCCGtccgcacgcacacacacccgCCGCCGGGTACACACTCTTGCACTCATCCTCGCCACATTTGCCAGTTGCTGGATACCATTCGCTTTATACGGCCTCCTGGGCGATGGGTCGTCCCCTGCTCTGTACACTTATGCCACATTGGTTCCAGTGACGGGAAACTCTCTGTTGAACCCGCTGATCTATGCCTACAGGAACACACACATCCAGAGAGTGCTGCGACAGACTGTGTGCTGCTGTCTGCCAAACACAcccaacaaaaacacacacaccccCAGCGACGTCTGAACTCAGGCAGCTCTGGAAATGATTATTATGGTGCCATATAATAGACCACAGGGTGCGCTCTAAAAATACTGGGTAAAATATTAGGACAGTTTCAGTTGTTGGGTTAAACTTGGTgtttaatttttcaaaattgtATTACTTTATAAATTGACTAGTTTAATACTAACCaattgagtaaacccattgttttaaaagcaataagTTCACTCTAAAAGcattgagtttactcactttaagtaaagcaattagttgagttgagttaaaaagtgagtaaacccattgcttttaaagctattagttgactcaactttaaaaaagtgagtaaacccgttgcttttaaaagcaattagttgactcaacttaaagtaAACCCTTTACTtttgaagcgattagttgactcaactttaaaaagggagtaaacctgttgcttttaaaagcaattagtttaCTCTAAGTAAAGCCATTGCTTTTGAAGCGAATAGTTgactaaactttaaaaaaaacaacggttaaacccattgcttttaaaagcGATTCGTTGACCCAACTTAAAGTAAAACCATTGCTTTTGAATCGgttagttgactcaacttaaaaaagtgagtaaacccattgcttttaaagcgattagttgacctagcttaaaaaagtgagtaaacccattgcttttaaagcgattagttgacctagcttaaaaaagtgagtaaacccattgcttttaaagcgattagttgacctagcttaaaaaagtgagtaaacccattgcttttaaagcgattagttgacctagcttaaaaaagtgagtaaacccattgcttttaaagcaattagttgactcaACTTGAAGTAAAACCTTTACTtttgaagcgattagttgactcaacttaaaaaagtgagtaaacctgttgcttttaaaagcaattagtttaCTCTAAGTAAAACCAATGCTTTTGAAGCGAATAGTTGACTAAACTTAAAAAAACGGTTAAACCCGTTgcttttaaaagcgattagttgacccAACTTAAAGTAAAACCAGTGCTTTTGAATCGgttagttgactcaacttaaaaaagtgggtaaaaccattgcttttaaaaatgattagttgactcaacttaaagtaAATACATatcttttaaagcgattagttgcctAACCttaaagtaaacccattgtatttaaaacaattagttgactctACTTAAAGTAAACACATTGCcttaaaatcattaaataaactgTGTGTATAATTACACAAAATAACATGAACAGattcactcactttttaaagtaaagacaaaattaaagtaactaattgctCTTTACAGTGTTGGTTTAGTCCTTATTTTACCCAAAATTAGGTTGAAATAATCCAGCATTTGTAAAACATGGGTGAAAAACAACTTGGCAGTTTTAATAGCTAGAACTCGTAGCATCATGCAGAAAA

Function

symbol description
gpr186 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in female organism. Orthologous to human GPR3 (G protein-coupled receptor 3).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0019222 regulation of metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-489 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in female organism. Orthologous to human GPR3 (G protein-coupled receptor 3).

Ensembl:

ensembl_id ENSDARG00000094860

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029591 True 2590 mRNA 0.41 2 43547465 43552252

Neighbor

gene id symbol gene type direction distance location
XLOC_015024 NA coding downstream 4897 43429805 ~ 43542568 (-)
XLOC_015023 NA coding downstream 264667 43272241 ~ 43282798 (-)
XLOC_015022 NA coding downstream 295715 43250524 ~ 43251750 (-)
XLOC_015021 gnrhr1 coding downstream 321341 43213527 ~ 43226124 (-)
XLOC_015020 CU207343.1 coding downstream 516577 43029382 ~ 43030888 (-)
XLOC_015026 fam83hb coding upstream 59927 43612179 ~ 43639331 (-)
XLOC_015027 si:ch211-193k19.2 coding upstream 101986 43654238 ~ 43659779 (-)
XLOC_015028 NA coding upstream 152663 43704915 ~ 43711293 (-)
XLOC_015029 ppt1 coding upstream 184017 43736269 ~ 43757568 (-)
XLOC_015030 klhl43 coding upstream 238680 43790932 ~ 43819610 (-)
XLOC_014711 CR382300.3 misc downstream 23818710 19728690 ~ 19728755 (-)
XLOC_015018 CU207343.2 non-coding downstream 563778 42962095 ~ 42983687 (-)
XLOC_015031 NA non-coding upstream 345688 43897940 ~ 43901052 (-)
XLOC_015035 NA non-coding upstream 1451549 45003801 ~ 45007057 (-)
XLOC_015036 FP340497.1 non-coding upstream 1605250 45157502 ~ 45244708 (-)
XLOC_015038 NA non-coding upstream 2136985 45689237 ~ 45690415 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_01115294_01116274 GPR3, GPR6, GPR186 coding CI01000054 null 1114693 ~ 1116822 (-)