XLOC_015036 (FP340497.1)


Basic Information

Item Value
gene id XLOC_015036
gene name FP340497.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 45157502 ~ 45244708 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029614
ATTAAACATGACACCAAGAGGAAATGTTACTTCCTGTTATTTAAACTTCACCTGACCTTTTCTAATACTCAAGCAAGTAGTCCTTTAAGACAGGTTATTATATTTGGTCAAAGGAGGTCATTTTCCCCACAGCGGGATCCAGGATTTACGTCTGAACTGATCTGCGATGAAACAGAAAATGGTGGAATTTATTATGAAATTAGTCTGCTCAGTTTCTAAAAACAGCAGCCTGGTGTTTTATCGCATCAAGTGGCTCTCAGGATGTCAAACATGAGTCTTACTGGACATGAACCTCTGAGAGCTCAAAACCCTTCACATTTGAACTTCACCTTGTCAGCGTTGGTCAATACAATGTTCGGTGAGTGCAGTGAAGAGGAGGAGAGTAATTACTGACTGGAAAGGTCAAGCACATCCAGTAC
>TCONS_00029615
ATTAAACATGACACCAAGAGGAAATGTTACTTCCTGTTATTTAAACTTCACCTGACCTTTTCTAATACTCAAGCAAGTAGTCCTTTAAGACAGGTTATTATATTTGGTCAAAGGAGGTCATTTTCCCCACAGCGGGATCCAGGATTTACGTCTGAACTGATCTGCGATGAAACAGAAAATGGTGGAATTTATTATGAAATTAGTCTGCTCAGTTTCTAAAAACAGCAGCCTGGTGTTTTATCGCATCAAGTGGCTCTCAGGATGTCAAACATGAGTCTTACTGGACATGAACCTCTGAGGTGTGCAGCAGTTGCGCTGGAGGAGAGTGTGTTTAGTAGGTGTGATGTTTGGTCTCCAGGGCTGTGTTTAGCAGTGGTCTACATTAGCCTGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117292

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029614 False 419 lncRNA 0.41 2 45157502 45244708
TCONS_00029615 True 393 lncRNA 0.42 2 45244185 45244708

Neighbor

gene id symbol gene type direction distance location
XLOC_015035 NA coding downstream 150445 45003801 ~ 45007057 (-)
XLOC_015034 csmd3a coding downstream 201792 44123618 ~ 44955710 (-)
XLOC_015033 rad21b coding downstream 1066097 44068250 ~ 44091405 (-)
XLOC_015032 uqcrb coding downstream 1091921 44049501 ~ 44065581 (-)
XLOC_015031 NA coding downstream 1256450 43897940 ~ 43901052 (-)
XLOC_015037 trps1 coding upstream 130961 45375669 ~ 45650994 (-)
XLOC_015038 NA coding upstream 444529 45689237 ~ 45690415 (-)
XLOC_015039 eif3hb coding upstream 611463 45856171 ~ 45960191 (-)
XLOC_015040 si:ch211-153f2.3 coding upstream 738939 45983647 ~ 45985989 (-)
XLOC_015041 krit1 coding upstream 746346 45991054 ~ 46018152 (-)
XLOC_014711 CR382300.3 misc downstream 25428747 19728690 ~ 19728755 (-)
XLOC_015028 NA non-coding downstream 1446209 43704915 ~ 43711293 (-)
XLOC_015024 NA non-coding downstream 1614934 43429805 ~ 43542568 (-)
XLOC_015023 NA non-coding downstream 1874704 43272241 ~ 43282798 (-)
XLOC_015045 NA non-coding upstream 1167905 46412613 ~ 46420558 (-)
XLOC_015047 NA non-coding upstream 1246875 46491583 ~ 46492033 (-)
XLOC_015051 NA non-coding upstream 1754553 46999261 ~ 47173408 (-)
XLOC_015054 CU929178.2 non-coding upstream 2155481 47400189 ~ 47400307 (-)

Expression


Co-expression Network