XLOC_015040 (si:ch211-153f2.3)


Basic Information

Item Value
gene id XLOC_015040
gene name si:ch211-153f2.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 45983647 ~ 45985989 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029621
ATAAGCTTCTACACGCTTTTAGGACGTCATCAGAGCCCCAAAATCCTGCAGAAACGGTCACCCATTCCGTAGGAAAGAGCTTACAGGTGAATGAAGAGCTCCGGAGAGCCAAAATAGATGGAGCCATCACTTGGTTAAGAACTGAACTGctGGAGATGCGCTCTCAGGACCGGCAGCTCGCTCAGACTCTGCTGGGGCTCAATAAGGAGATTCAGAGGCTCAGACGGGAGAGCGGATCCCTGCTACTAGAAGAGGACACGGAAAACCTGTGACCCAGcgttatggacccttttcacaattcCAGGTCTCTCAGCAGCGGAAGTCATCATAATTGGCTAAAGTTAGAGTGccgtgaatgggagagtacaacagatcattttttacaatccta

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-135 No description available

Ensembl:

ensembl_id ENSDARG00000098980

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029621 True 391 mRNA 0.49 2 45983647 45985989

Neighbor

gene id symbol gene type direction distance location
XLOC_015039 eif3hb coding downstream 23456 45856171 ~ 45960191 (-)
XLOC_015038 NA coding downstream 293232 45689237 ~ 45690415 (-)
XLOC_015037 trps1 coding downstream 332653 45375669 ~ 45650994 (-)
XLOC_015036 FP340497.1 coding downstream 738939 45157502 ~ 45244708 (-)
XLOC_015035 NA coding downstream 976590 45003801 ~ 45007057 (-)
XLOC_015041 krit1 coding upstream 5065 45991054 ~ 46018152 (-)
XLOC_015042 nup153 coding upstream 33324 46019313 ~ 46058963 (-)
XLOC_015043 ptdss1b coding upstream 80900 46066889 ~ 46091605 (-)
XLOC_015044 si:ch1073-228h2.2 coding upstream 232110 46218099 ~ 46219035 (-)
XLOC_015045 NA coding upstream 426624 46412613 ~ 46420558 (-)
XLOC_014711 CR382300.3 misc downstream 26254892 19728690 ~ 19728755 (-)
XLOC_015031 NA non-coding downstream 2082595 43897940 ~ 43901052 (-)
XLOC_015028 NA non-coding downstream 2272354 43704915 ~ 43711293 (-)
XLOC_015047 NA non-coding upstream 505594 46491583 ~ 46492033 (-)
XLOC_015051 NA non-coding upstream 1013272 46999261 ~ 47173408 (-)
XLOC_015054 CU929178.2 non-coding upstream 1414200 47400189 ~ 47400307 (-)
XLOC_015055 CU929178.1 non-coding upstream 1429601 47415590 ~ 47416405 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location