XLOC_015044 (si:ch1073-228h2.2)


Basic Information

Item Value
gene id XLOC_015044
gene name si:ch1073-228h2.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 46218099 ~ 46219035 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029632
ACTGTAACCCTGAGACAAACACCAGCACCAAGCGAAAACACGCCATCAGTTTGGATCCATCAATTGACTCGATCATTCACACATCAGATGATGGAGATTCAGAAGAAACATCAGCCAGTGATAATAACCATCAGCGCTTTCTTCATTTCATAAACGGAGAAGATCCGGAAGAAGAACAACCGCCTGGAAAAAGGAGACTCATTTCTTATCACACTGACCAAAATAAATCAGACACTGAAGAATACAGTGATCAAGATGCTGAAAACGTATATACAAATCAGATGAATCCTGAAAATCCACACCATGGACACGTCGTTCAGTCTCCAAGTCCTATAAACGAACATCTAAGAGATCAAAAATCCTCATTTAGGACGTCCATCTTAACATCCAGATCTGTAAATGAACACAAACCACATGCAAATCTTCATAAAGAGCCAAAAACGAAAGCATCTCCATTGAAACGAATGGGAAAAGAGAACAGCTCGCCTGTTAAAAACACTCCATCCTCTCCTTTCAAGCATAAATCAATCTCCAGTCCATCCAAATGCAGATTAAAGGGGAAATACAGATGTCCGCCCAGTAATCCGTGTAAGGAAGAGAGTGTTTCGTCGATGTTTACTCAGGATTCTGAAGGTTTCTGTGTGATCGCTCACCGTGATCAGTGTTTAGAGAGCGCAGATCTACAGCCTGCAGATTACAGGAGCAGTCAGGATGAAGAGTCAGACGCAGAGATGCTCTTTACTCAGGATTCAGAGGGAAACATGGTCATCAAACACTGATCTGACATTTACAGCAAGAAACTGAATTAACAAACGAGACTCCTTTGGCTTTTGAAGCTGTTGactttatattgttgttttaaatgtgtgaGATGATGtagaaactaaatattttaaagttgtaatCAATGAAGAGACAAATAAAATCCTGAAATGTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099981

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029632 True 937 mRNA 0.40 1 46218099 46219035

Neighbor

gene id symbol gene type direction distance location
XLOC_015043 ptdss1b coding downstream 126494 46066889 ~ 46091605 (-)
XLOC_015042 nup153 coding downstream 159136 46019313 ~ 46058963 (-)
XLOC_015041 krit1 coding downstream 199947 45991054 ~ 46018152 (-)
XLOC_015040 si:ch211-153f2.3 coding downstream 232110 45983647 ~ 45985989 (-)
XLOC_015039 eif3hb coding downstream 257908 45856171 ~ 45960191 (-)
XLOC_015045 NA coding upstream 193578 46412613 ~ 46420558 (-)
XLOC_015046 ext1b coding upstream 202314 46421349 ~ 46566430 (-)
XLOC_015047 NA coding upstream 272548 46491583 ~ 46492033 (-)
XLOC_015048 SAMD12 coding upstream 505176 46724211 ~ 46764361 (-)
XLOC_015049 abrab coding upstream 549231 46768266 ~ 46777963 (-)
XLOC_014711 CR382300.3 misc downstream 26489344 19728690 ~ 19728755 (-)
XLOC_015038 NA non-coding downstream 527684 45689237 ~ 45690415 (-)
XLOC_015036 FP340497.1 non-coding downstream 973391 45157502 ~ 45244708 (-)
XLOC_015035 NA non-coding downstream 1211042 45003801 ~ 45007057 (-)
XLOC_015031 NA non-coding downstream 2317047 43897940 ~ 43901052 (-)
XLOC_015028 NA non-coding downstream 2506806 43704915 ~ 43711293 (-)
XLOC_015051 NA non-coding upstream 780226 46999261 ~ 47173408 (-)
XLOC_015054 CU929178.2 non-coding upstream 1181154 47400189 ~ 47400307 (-)
XLOC_015055 CU929178.1 non-coding upstream 1196555 47415590 ~ 47416405 (-)

Expression


Co-expression Network