XLOC_015047



Basic Information


Item Value
gene id XLOC_015047
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 46491583 ~ 46492033 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030347
aaataatttgaaaagaTTGAGCCAATAAAAGCATATACATTTAGTTGACAGCATTTAAAATCCATCTTAAAGCACTAGGCTTAAAATCCATCTTAAAGCACTAGGCTTACAATCCATCTTAAAGCACTAGGCTTAAAATCCATCTTAAAAGCACTAGGCTTAAAATCCATCCATTTTAAAGCACTAGGCTTAAAATCCATCTTAAAGCATAGgcttataatacatttaaaagcaCTAGGCTTAAAATGCAGCTTAAAATCCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030347 True 262 lncRNA 0.31 3 46491583 46492033

Neighbor


gene id symbol gene type direction distance location
XLOC_015045 NA coding downstream 71025 46412613 ~ 46420558 (-)
XLOC_015044 si:ch1073-228h2.2 coding downstream 272548 46218099 ~ 46219035 (-)
XLOC_015043 ptdss1b coding downstream 399978 46066889 ~ 46091605 (-)
XLOC_015042 nup153 coding downstream 432620 46019313 ~ 46058963 (-)
XLOC_015041 krit1 coding downstream 473431 45991054 ~ 46018152 (-)
XLOC_015048 SAMD12 coding upstream 232178 46724211 ~ 46764361 (-)
XLOC_015049 abrab coding upstream 276233 46768266 ~ 46777963 (-)
XLOC_015050 angpt1 coding upstream 320239 46812272 ~ 46957968 (-)
XLOC_015051 NA coding upstream 507228 46999261 ~ 47173408 (-)
XLOC_015052 sdc2 coding upstream 698972 47191005 ~ 47276297 (-)
XLOC_014711 CR382300.3 misc downstream 26762828 19728690 ~ 19728755 (-)
XLOC_015038 NA non-coding downstream 801168 45689237 ~ 45690415 (-)
XLOC_015036 FP340497.1 non-coding downstream 1246875 45157502 ~ 45244708 (-)
XLOC_015035 NA non-coding downstream 1484526 45003801 ~ 45007057 (-)
XLOC_015031 NA non-coding downstream 2590531 43897940 ~ 43901052 (-)
XLOC_015054 CU929178.2 non-coding upstream 908156 47400189 ~ 47400307 (-)
XLOC_015055 CU929178.1 non-coding upstream 923557 47415590 ~ 47416405 (-)
XLOC_015061 CU695215.1 non-coding upstream 1075680 47567713 ~ 47567848 (-)
XLOC_015063 NA non-coding upstream 1268864 47760897 ~ 47761491 (-)

Expression



Co-expression Network