XLOC_015063


Basic Information

Item Value
gene id XLOC_015063
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47760897 ~ 47761491 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030352
GTACTGCAATGGGACAGACGGTAGTTTGTTGATGTGTGTGCGTTCATGAGATTGTAAGTTCAAATTACTATTTATTGTTAGCtaaaaatgtgtatatgtatacttTCTAATATATACTGTTTTGTTCTACCTCAGTATTTTAAGATGCCTTAGCTAAAAGAGTTTGCTTGACAGATCTGTATAAATAGACTGTTAAAATCAATGTTTACAGCATATACTTATACAAATAATGCTAATTGAAACTATAAggtgtttatacatttataattagtATTCAAAGATACTGAAATCAGTTTATGTGAAGTATAGCAAATTGTATTATTAGATTATACAACATGTAGCGAGTTTACATGGCTGCTGTTTGTTATAACTGGTGCCTAGTGGCCATTAGCGGAATTACCTTGGATTATTCCCCATtcagtaatgtttatttattgtcattcaaGAATATTTGTTTAAGAGCTTTGTTTAATCTACtggtattgttttatttcagaaaccacacacacacaaatgcacccAAATACGCAAATCTAAATGCACTCCTAAATGTGTAAACTGTTTGAAGATGGGATTGAATAAATCAATGTGCAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030352 True 595 lncRNA 0.31 1 47760897 47761491

Neighbor

gene id symbol gene type direction distance location
XLOC_015062 CABZ01071972.1 coding downstream 173178 47578811 ~ 47587719 (-)
XLOC_015060 rrm2 coding downstream 189089 47564890 ~ 47571808 (-)
XLOC_015061 CU695215.1 coding downstream 193049 47567713 ~ 47567848 (-)
XLOC_015059 actc1a coding downstream 204941 47549568 ~ 47555956 (-)
XLOC_015058 grem1a coding downstream 233705 47522007 ~ 47527192 (-)
XLOC_015064 cdca8 coding upstream 10168 47771659 ~ 47782916 (-)
XLOC_015065 ago4 coding upstream 39059 47800550 ~ 47832853 (-)
XLOC_015066 NA coding upstream 170407 47931898 ~ 47932934 (-)
XLOC_015067 ctnnb2 coding upstream 214425 47975916 ~ 47997424 (-)
XLOC_015068 zgc:158376 coding upstream 242200 48003691 ~ 48015928 (-)
XLOC_014711 CR382300.3 misc downstream 28032142 19728690 ~ 19728755 (-)
XLOC_015055 CU929178.1 non-coding downstream 344492 47415590 ~ 47416405 (-)
XLOC_015054 CU929178.2 non-coding downstream 360590 47400189 ~ 47400307 (-)
XLOC_015051 NA non-coding downstream 587489 46999261 ~ 47173408 (-)
XLOC_015047 NA non-coding downstream 1268864 46491583 ~ 46492033 (-)
XLOC_015069 NA non-coding upstream 256215 48017706 ~ 48024071 (-)
XLOC_015071 NA non-coding upstream 423807 48185298 ~ 48186157 (-)
XLOC_015072 NA non-coding upstream 476159 48237650 ~ 48241837 (-)
XLOC_015075 NA non-coding upstream 567057 48328548 ~ 48330301 (-)

Expression


Co-expression Network