XLOC_015071



Basic Information


Item Value
gene id XLOC_015071
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 48185298 ~ 48186157 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030355
CTTCACTTTTAAAATAGGTGAtataacacatttaaacacacacattgtACTCACTTTAAGATTGGAGAGCTGTCCGAAAGTCTTCATACAGACATTGCATTCATATTTGATCTTCCCGTTCTGCTTTTTCAGTGGATACGGGAGAGATTTATACCCAGGAATCATGGCTGGAGAGGCTGACGGAGGATAGGACAAACCGTCAGGATTCATGAAGCCGTATCGGTGGGCTGGTTTTGTGGGAAGCATTGAAGTGAACGGAGGAGAGTATGGAGGAATGAGCATGTGCTGGTAATGAGGGTTATACTGCGGTAAGAGCGGATATGGAGACCGTATTGACGGATATGAGGAGATCAAACCCTCTCGGTGACCGTACAGGCTGTGTAGATGCAGCGGGACGTCCTGCGGTGGAGACAGGCTCgggtaaatgtttgttttttcatgcatTGGTTCTGACTTGTGGATCTTCTTGCTGAAGTCCATTATTTGCTCGTCTGGAGTGTCTGGCGGCGTGTCTCTCTCGATGTCGATCTTCTCTTCAGGTTCCTCGTCGTCTTTATTTGTGTCGCAGGGATGGTTTTGTGGGTTCGAGGGGTGTTTGGGGTAATATGTGTACTGAGGTAGAGGAGGCTTCTGGTACTCCATATCTGATG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030355 True 650 lncRNA 0.47 2 48185298 48186157

Neighbor


gene id symbol gene type direction distance location
XLOC_015070 csf3b coding downstream 145792 48037798 ~ 48039506 (-)
XLOC_015069 NA coding downstream 161227 48017706 ~ 48024071 (-)
XLOC_015068 zgc:158376 coding downstream 169370 48003691 ~ 48015928 (-)
XLOC_015067 ctnnb2 coding downstream 187874 47975916 ~ 47997424 (-)
XLOC_015066 NA coding downstream 252364 47931898 ~ 47932934 (-)
XLOC_015072 NA coding upstream 51493 48237650 ~ 48241837 (-)
XLOC_015073 si:ch73-359m17.11 coding upstream 114136 48300293 ~ 48306765 (-)
XLOC_015074 si:ch73-359m17.9 coding upstream 122593 48308750 ~ 48312109 (-)
XLOC_015075 NA coding upstream 142391 48328548 ~ 48330301 (-)
XLOC_015076 NA coding upstream 147931 48334088 ~ 48336535 (-)
XLOC_014711 CR382300.3 misc downstream 28456543 19728690 ~ 19728755 (-)
XLOC_015063 NA non-coding downstream 423807 47760897 ~ 47761491 (-)
XLOC_015061 CU695215.1 non-coding downstream 617450 47567713 ~ 47567848 (-)
XLOC_015055 CU929178.1 non-coding downstream 768893 47415590 ~ 47416405 (-)
XLOC_015077 NA non-coding upstream 153189 48339346 ~ 48349001 (-)

Expression



Co-expression Network