XLOC_015223 (BX248229.1)


Basic Information

Item Value
gene id XLOC_015223
gene name BX248229.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 8189285 ~ 8189400 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030545
GCTAGCAGCTAGCTTTTCAACAACCCTCAtgtggttgcccactgaagctaagcagggcttcgCCCAGTCAGTCtctggatgggagatcacatggaaaagctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107448

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030545 True 116 rRNA 0.53 1 8189285 8189400
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015222 chst2a coding upstream 74677 8112449 ~ 8114608 (+)
XLOC_015221 pcolce2a coding upstream 138787 8031234 ~ 8050498 (+)
XLOC_015220 si:ch211-38m6.6 coding upstream 314901 7847480 ~ 7874384 (+)
XLOC_015219 kcnmb2 coding upstream 359885 7818368 ~ 7829400 (+)
XLOC_015218 NA coding upstream 421012 7763907 ~ 7768273 (+)
XLOC_015224 dipk2aa coding downstream 71709 8261109 ~ 8312199 (+)
XLOC_015225 NA coding downstream 294994 8484394 ~ 8488138 (+)
XLOC_015226 fubp1 coding downstream 459893 8649293 ~ 8663104 (+)
XLOC_015227 NA coding downstream 501258 8690658 ~ 8691029 (+)
XLOC_015228 usp33 coding downstream 527755 8717155 ~ 8777496 (+)
XLOC_015217 CT027646.1 non-coding upstream 465344 7723870 ~ 7723941 (+)
XLOC_015216 CT027646.4 non-coding upstream 465702 7723394 ~ 7723583 (+)
XLOC_015215 SNORA81 non-coding upstream 467895 7721212 ~ 7721390 (+)
XLOC_015214 CT027646.3 non-coding upstream 468276 7720939 ~ 7721009 (+)
XLOC_015231 NA non-coding downstream 943185 9132585 ~ 9330209 (+)
XLOC_015232 NA non-coding downstream 1126919 9316319 ~ 9318279 (+)
XLOC_015236 NA non-coding downstream 1462316 9651716 ~ 9657047 (+)
XLOC_015213 NA non-coding upstream 462037 7715792 ~ 7727248 (+)

Expression

Expression of XLOC_015223(BX248229.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Expression of XLOC_015223(BX248229.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network