XLOC_015227



Basic Information


Item Value
gene id XLOC_015227
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 8690658 ~ 8691029 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033241
TGATTTATTGATTTGATTCAAATCATAATCCGATATGACGTCAACATTCCTGGAACATGTTCCACGTTCTAAAACAGTTCGAACGCGCACAAGCCGAGCGGCCATTTTCTACAGTACTACCGCGATTTATCTGCACGATCGAGGTAAGGAAGGACacgtttatttgttgttttatatgtattttaatgtttacgactttgtatattgcatatttgattactttttttatttgtagacTCAAGAACACAGCCAGCTTCACACATCTGAAAACTGTGACCACACAGGACATCTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033241 True 292 lncRNA 0.38 2 8690658 8691029

Neighbor


gene id symbol gene type direction distance location
XLOC_015226 fubp1 coding upstream 27554 8649293 ~ 8663104 (+)
XLOC_015225 NA coding upstream 202520 8484394 ~ 8488138 (+)
XLOC_015224 dipk2aa coding upstream 378459 8261109 ~ 8312199 (+)
XLOC_015223 BX248229.1 coding upstream 501258 8189285 ~ 8189400 (+)
XLOC_015222 chst2a coding upstream 576050 8112449 ~ 8114608 (+)
XLOC_015228 usp33 coding downstream 26126 8717155 ~ 8777496 (+)
XLOC_015229 zzz3 coding downstream 87461 8778490 ~ 8842472 (+)
XLOC_015230 pigk coding downstream 370856 9061885 ~ 9138497 (+)
XLOC_015231 NA coding downstream 441556 9132585 ~ 9330209 (+)
XLOC_015232 NA coding downstream 625290 9316319 ~ 9318279 (+)
XLOC_015218 NA non-coding upstream 922385 7763907 ~ 7768273 (+)
XLOC_015217 CT027646.1 non-coding upstream 966717 7723870 ~ 7723941 (+)
XLOC_015216 CT027646.4 non-coding upstream 967075 7723394 ~ 7723583 (+)
XLOC_015236 NA non-coding downstream 960687 9651716 ~ 9657047 (+)
XLOC_015239 BX470264.2 non-coding downstream 1184500 9875529 ~ 9875645 (+)
XLOC_015249 FO704816.1 non-coding downstream 1514972 10206001 ~ 10206118 (+)

Expression



Co-expression Network