XLOC_015240 (CR956623.1)


Basic Information

Item Value
gene id XLOC_015240
gene name CR956623.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 9918678 ~ 9941405 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030572
CAACTGCGTCTGTTAATACCTAGGGCGCTTTGAAGTATCTTCAGATCGATGAAACACAGGAGACCTGTCCATGATATTAAGGGGAATGGAAGATTCCAAATCTGCTCAGAAGAGGTTTGAAGCAGCCGTAAAAGTGATTAGAAGTTTACCTGAAGATGGCTCTTATGACCTGTCCGATGATATGCTGGTTTTGTTCTACAGTTACTACAAACAGGCTACAGAAGGACCCTGTAACACCCTAAAACCAAACTCTTGGGATCCTATTGGAAAAGCTAAATGGGAGGCATGGAAAGACTTGGGAAACATGTCAAAGGATCAAGCCATGACGGAATATGTTCAagaaatacaactgATAATAGAAACCCTCCCGGTCACGGATAGGATGGCAGAATTATTGGATGCTCTTGACCCATTTTATGAGATTgtggaagatgatgatgatgatgatgatgaaggtgtCAGTAAAGCAGCACCGTTATTCACAGGAAGCACTAATGCTGATAAAGATGCTGAGAGAGATGAAGAAGTGGAAAGTGAAAGTAAGGAGGGAAATCTAGATGATTACATGGAGTTGGTGGAAAAACAGAAAGatttgagctccactACTGGAGAGAAAGGTAGTTTGCTGGTGTTTAATAGAAGTGAGGAGAACAGCATCTCCTCCTTGACCGATGGCACTCACAGCTCTCTGAACACTGTGGACGATGAGGAGGAACTGGTTTATGATGGCTCAGATGATGAGATGGACAGTGACTCAATGGATAAACCAGCAACACCAGAGAAGGGTTCAGGAGTTCGCAGCGTGCGTTTGGCAGATGGGAGTGTGGTTGGAGCCAACATGCAACACGGGGGAAACAGAGAGCCTCAGTGTGGGAGTCAGGATGGAAAACCGCAGGGACTTATATCCCCCGTCCCCCACCCGCCGACTCTTGGAACAGTCCGAAATGACAGAATCTCAGCATGCAGTGGAAGAGAGCGCGGTTGCCAAGGAGATGGTGGTCAGCGCGGGGAGACGGCAGACAGAATGGACAAACAGGCCATCAACACACAGATCACCACCATATTGTCGGAGCTGGAGGACAACATGCAGGATGTTCTTCGCAGACTGACCACACTGGAACAGCTTACAGCGTCACAAGCTGAAATCTCTCCTTCCAAAACCTGGCACTCCGACAAACCAAAAAAGAGGCTGTCATGGTGGCCTTTAAACTCATCCCCCTTCACTGCAGTGCTAACAGTTCTCTGGCCATTTGCTGTTCATTGGCTGGTGCAGTTTTACTtacagaggaggaggaggaggtaa
>TCONS_00030573
AGATGCAGACCTGTCCATGATATTAAGGGGAATGGAAGATTCCAAATCTGCTCAGAAGAGGTTTGAAGCAGCCGTAAAAGTGATTAGAAGTTTACCTGAAGATGGCTCTTATGACCTGTCCGATGATATGCTGGTTTTGTTCTACAGTTACTACAAACAGGCTACAGAAGGACCCTGTAACACCCTAAAACCAAACTCTTGGGATCCTATTGGAAAAGCTAAATGGGAGGCATGGAAAGACTTGGGAAACATGTCAAAGGATCAAGCCATGACGGAATATGTTCAagaaatacaactgATAATAGAAACCCTCCCGGTCACGGATAGGATGGCAGAATTATTGGATGCTCTTGACCCATTTTATGAGATTgtggaagatgatgatgatgatgatgatgaaggtgtCAGTAAAGCAGCACCGTTATTCACAGGAAGCACTAATGCTGATAAAGATGCTGAGAGAGATGAAGAAGTGGAAAGTGAAAGTAAGGAGGGAAATCTAGATGATTACATGGAGTTGGTGGAAAAACAGAAAGatttgagctccactACTGGAGAGAAAGGTAGTTTGCTGGTGTTTAATAGAAGTGAGGAGAACAGCATCTCCTCCTTGACCGATGGCACTCACAGCTCTCTGAACACTGTGGACGATGAGGAGGAACTGGTTTATGATGGCTCAGATGATGAGATGGACAGTGACTCAATGGATAAACCAGCAACACCAGAGAAGGGTTCAGGAGTTCGCAGCGTGCGTTTGGCAGATGGGAGTGTGGTTGGAGCCAACATGCAACACGGGGGAAACAGAGAGCCTCAGTGTGGGAGTCAGGATGGAAAACCGCAGGGACTTATATCCCCCGTCCCCCACCCGCCGACTCTTGGAACAGTCCGAAATGACAGAATCTCAGCATGCAGTGGAAGAGAGCGCGGTTGCCAAGGAGATGGTGGTCAGCGCGGGGAGACGGCAGACAGAATGGACAAACAGGCCATCAACACACAGATCACCACCATATTGTCGGAGCTGGAGGACAACATGCAGGATGTTCTTCGCAGACTGACCACACTGGAACAGCTTACAGCGTCACAAGCTGAAATCTCTCCTTCCAAAACCTGGCACTCCGACAAACCAAAAAAGAGGCTGTCATGGTGGCCTTTAAACTCATCCCCCTTCACTGCAGTGCTAACAGTTCTCTGGCCATTTGCTGTTCATTGGCTGGTGCAGTTTTACTtacagaggaggaggaggaggtaaGGTTCTTCTGGGCTCTGGAAATCCTTGAAAATGCTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058410

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030572 False 1303 mRNA 0.47 12 9918678 9941230
TCONS_00030573 True 1285 mRNA 0.47 12 9918935 9941405

Neighbor

gene id symbol gene type direction distance location
XLOC_015239 BX470264.2 coding upstream 43033 9875529 ~ 9875645 (+)
XLOC_015238 anxa13l coding upstream 76438 9821757 ~ 9842240 (+)
XLOC_015237 pcyt1aa coding upstream 138719 9755422 ~ 9779959 (+)
XLOC_015236 NA coding upstream 261631 9651716 ~ 9657047 (+)
XLOC_015235 gipc2 coding upstream 327828 9560740 ~ 9590850 (+)
XLOC_015241 tsen15 coding downstream 4716 9946121 ~ 9957805 (+)
XLOC_015242 sec22ba coding downstream 29537 9970942 ~ 9983661 (+)
XLOC_015243 slc35a3b coding downstream 49086 9990491 ~ 10040264 (+)
XLOC_015244 cmpk coding downstream 122342 10063747 ~ 10076929 (+)
XLOC_015245 insl5b coding downstream 186357 10127762 ~ 10129061 (+)
XLOC_015231 NA non-coding upstream 588469 9132585 ~ 9330209 (+)
XLOC_015232 NA non-coding upstream 600399 9316319 ~ 9318279 (+)
XLOC_015227 NA non-coding upstream 1227649 8690658 ~ 8691029 (+)
XLOC_015249 FO704816.1 non-coding downstream 264596 10206001 ~ 10206118 (+)
XLOC_015251 NA non-coding downstream 343356 10284761 ~ 10285629 (+)
XLOC_015252 BX927121.1 non-coding downstream 445074 10386479 ~ 10416272 (+)
XLOC_015253 NA non-coding downstream 622094 10563499 ~ 10564386 (+)
XLOC_015254 NA non-coding downstream 663108 10604513 ~ 10607329 (+)

Expression


Co-expression Network