XLOC_015252 (BX927121.1)


Basic Information

Item Value
gene id XLOC_015252
gene name BX927121.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 10386479 ~ 10416272 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030592
GACAGATCTGTAAAAGTAGCTACTCACCAATCAGCCCTCCGACCATAAAGGAAAACGCTTGGAATAACATGAGAATCACTCCCAGAATCACCAACTTTTTGGTGCTCATATTCTCAATAATTGCCCCAGCCATTTTCAAAGTGCGTCTTCAGACAGGATTGAAAGCAAGCAGGCGAAATTCACGGCATCCAGGTGGACCAGTGCGCTGCCCGAGATTGAGAGCGCGTCTCAAACCCTAGTCAATTGCCTGCGTTGCGCGCTTCCTAGGGAACTTTAGGGGAAAGGGAGCGACCACGTGACCCGCCCTGCATCAGGAACTCAAGCGAGGAAAGTGCACGTGACGTCACACGGCCAGGCTCTCCGCCAGATGTGCGAAACTTTGAGATGGTGCTGGAGGCAAAAGCGAgtctgagagagagacagagagagagagctcccATGCAGAACATGACAATAACACAGAGCTGCTTCACTCCAGCCTCCTTCCCCTGCTAAATGTTTAACTCTGAGGTGTAGAGGATCAGGTAACAGTCTCCACCAAAGAACTGGCCATAGGTCTTGGGGTCCACCGGCACACGAGCTCCTTCCTCTACACGCCAGATCTGATTCAGACCAACATCACCGATTAATAAAACAATCTCATTGTGTATCTTCCTTATAAAATGTACAAGCGAGATTTAACATTGACCTTCAATAATTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094480

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030592 True 701 lncRNA 0.49 3 10386479 10416272
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015251 NA coding upstream 100850 10284761 ~ 10285629 (+)
XLOC_015250 gadd45aa coding upstream 101907 10280645 ~ 10284572 (+)
XLOC_015249 FO704816.1 coding upstream 180361 10206001 ~ 10206118 (+)
XLOC_015248 nsun4 coding upstream 217046 10160484 ~ 10169433 (+)
XLOC_015247 pfn2l coding upstream 234640 10147029 ~ 10151839 (+)
XLOC_015253 NA coding downstream 147227 10563499 ~ 10564386 (+)
XLOC_015254 NA coding downstream 188241 10604513 ~ 10607329 (+)
XLOC_015255 dipk1aa coding downstream 225775 10642047 ~ 10687230 (+)
XLOC_015256 evi5a coding downstream 293285 10709557 ~ 10760516 (+)
XLOC_015257 gfi1aa coding downstream 350472 10766744 ~ 10785866 (+)
XLOC_015239 BX470264.2 non-coding upstream 510834 9875529 ~ 9875645 (+)
XLOC_015236 NA non-coding upstream 729432 9651716 ~ 9657047 (+)
XLOC_015231 NA non-coding upstream 1056270 9132585 ~ 9330209 (+)
XLOC_015261 CR450845.1 non-coding downstream 590385 11006657 ~ 11006790 (+)
XLOC_015265 BX901918.1 non-coding downstream 827614 11243886 ~ 11244007 (+)
XLOC_015266 NA non-coding downstream 1212730 11629002 ~ 11633323 (+)

Expression

Expression of XLOC_015252(BX927121.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4.
End of interactive chart.

Expression of XLOC_015252(BX927121.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4.
End of interactive chart.

Co-expression Network