XLOC_015255 (dipk1aa)


Basic Information

Item Value
gene id XLOC_015255
gene name dipk1aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 10642047 ~ 10687230 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030593
GGGAAAAAAAGCACTCCTTTAGGCAGAAATAGTGTACGCCTGCGCTCTTGACACGCCGCTGTCTCGCTGCTTTTAAACAGCTGCTCTTGAAAGTGTTAGCCGCTGGATGTCAACCAAGGCGACTCGAATGACATGAATTTCTGAAATAACATGCACATTTCCACGGTGGCCGTCGGGAAGTCGGATATCTGTGAGAGGATCTCGGCTTGTCCGCGTCATGTGTAGCGCGAGCCCAATGACTTGAAGTTCGCCGGGCATTATTTCATTTCATTCGGTATATGGAGACTCTGCTCTGGATCGCGCACAGGCTTTGAGATGATCCATTTCTGCGATGGCGAGGGGTCTGTTTTCACGGGCCTGGCTGTCAAAGACGCACCATTTTCAGGCTCGCCTGTCCTATATTCGAGTGAAGTATCTCTTTCTCACGTGGCTTGCTGTGTTTGTGAGCAGTTGGGTTGTTTATGTCCAGTACTCCACGTACACTGAGCTGTGCAGAGGACGAGAATGCAAGAGCATCATTTGTGACAAATACAGCAAAGGCATTATCGATGGTTCAGCCTGCAGCAGCCTGTGTGAAGAAAGCAAACTGTACTTTGGAAGGTGCCTCTCCACCAAACCAAACAATCAGGTGTATACGGGCAGCTGGGGTGACCAGGACGGTGTCATCAAGTGTCAACTAAGTGACGTCCTGCACTATGAGCTGGGGGAAGAGCTGGAGCCAAAGAAAGAGATCACACTCTTCGAAAAGCCCACCCGAGGAACATCTGTAGAGAAGTTCAAAGAAATGGTCGCAAGTCATTTGAAGGCAAAAGTTGGAGAGCAAGCTAACCTGTCCAATTTGGTTAGCCTAATTCTTTCAGTGGCCGACAGCAACAAAGATGGCCACATCTCTCTCCCGGAGGCCAAGTCTGCCTGGGCTTTATTACAGCTCAACGAAGTTCTGCTGGCGGTGGTGCTCCAGGGCCGAGAGCACACACCTAAACTGCTGGGCTTCTGCGGGGACCTGTACGTGGTGGAGCGGGTTCCTCATGCTCCGCTGTTTGGTATCACCTTGCCCTGGCCTATGGATCTGTGGATCCCCGCGGGAATGCGGCGAAGCATGGACCAGTGGTTCACACCGTCCTGGCCCCGCAAGGCCAAAATCTTCATCGGCTTGCTGGAACTTATTGAAGACATCTTCCATGGTACCTTTGGGAGCTTCTTAATGTGCGACATGAGAGCCAGTTCGTTTGGCTACACCGACCGCCACGACCTCAGGCTAGTGGATGGCCGGCGTGTAGTAGCCGAGGAGGCCTTCAAACAGGCCATGATCCTCCAGCGCTGTAAGGACCACGAGGACTGTGTGTACGGTGCGGACTGTAGGACTTCATGCGACCTTTCAGAACAGCGTTGCACAGCCGAGGTGGCTCAGCCCAATCTGGCGCGAGCCTGCGGAGCAATGAAGGATTACCTCCTACGAGGAGCTCCGTTCCATCTGCAGGAAGAGCTAGAGAAGCAACTGTACGCCTGCATGGCTCTCAAGGGTTCGGCTGAGCAGATGGAAATGGAGCACTCACTCATCCTCAATAACCTCAAGACCCTGCTGTGGAAACAGATCTCACACACCACCGACTCCTGAAGAGAAGCCAGGGTGGTCAGGGGTGACCAAACTTGGTCcagaagggccggtgtcctgcaaatattatttacaaccccaatcagactcacctgggctagctaatcaagctcttactaggttttctagaaacatccttgcaggtgtgttgaggcaagttggagctgaagTTTGCAGAACACCgctcctccaggaccaagtttgggcacccctgatttagattcTTGAATGTCTTCTGAAGCACTTGAGGCCATTTTCAAGATGGCTGCTGGAAGGTAAAGTTGCCAGAAATAAAGGTTTTCTTTCTTGATTAGGGGGGGAAACGTCAAATTGTGAGGAATTATTTCTCAGGCTCAACGTTGAAGTTCACGTTTCCGTTTCATGCTTTGTCGTCATACACAAGTGATCGATGATCATGTTTATTCTACACTTCCTTCAGATGTTATGAAGGAGCAAGTAATGCTAACTTTGCATCCGTTGTTGGATGCTAGCGTAGAAAGTGAAGGAATGCACTCACCACTGAGTGTGGTTGTGTAAGTCTCGTATTGTAACGTTTGTCACACATGAGCACAGCAAAAAGAGCCATAAAAGAGCCATTGTGAAATGGAAATACTAATGCCTTGATATGCATGTTGCCAGTGAGTGTGTTATTTTGAGTTCGATGCTTGTGTGTACTTCTCTTGGGTCAATTCTCGGAAATGATCAAGCCGACCACTTATGATCTGATggtagcttaaaaaaaaaaaggttcaattTGTTGACAGTATTAGTTATTGCAATAGCtatcagcatttattaatataggAGAATGTAAACTAATGCGTTTTAATAGTTTGAAACGTCAGTTGtgccaaacctgtttgagcttcATTATTCTGTCTAACACAAAATAATTCAAAGTACAATTTCAAATTCATGCATTGTTTCCTACCATGAATGTAAACTGCGACAAttacaaacattcttcaaaatattttcttttgtattcaacaaaaacaaactaaaatggctgttttttaccatttaatctaaattaaaaatgttgtaaTTAATAAGATGCGATGCCTATTGCATTAACCAGTGTAAAtcaaattaatcttttttttttttttgtgaaatgttgAAATGTTTACAGGAGTCTTGCGAGTAACACTACAACAATGAAGCCCTACTCAACCATGATAGTTCACAGAGTTGATCATTATTTATTTCTAATGTTATTTTAGTAATTTAGGCatgtctaataaataaataacatttagatTTCAAGCTAAAGCTGTATGAGATGTCTACCATCACATTATGATGTactaatgaatgaaggaattaagAGGTGCTTTGTTTGTTGATCAGCCATTTTCAATGGGATGTTTCAGATTGTTTGTCAAACTGCTTCAATTTTGTGTACTCATAAATCCCACTGCTGCTGACTTTAAATGGAGATTTTTATAAAAGTTGATTGCATGACTTTGCACATTAAAAGTGTTTCTCAAATCTA

Function

symbol description
dipk1aa Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human DIPK1A (divergent protein kinase domain 1A).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060421-4286 Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human DIPK1A (divergent protein kinase domain 1A).

Ensembl:

ensembl_id ENSDARG00000062955

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030593 True 3113 mRNA 0.45 5 10642047 10687230

Neighbor

gene id symbol gene type direction distance location
XLOC_015254 NA coding upstream 34718 10604513 ~ 10607329 (+)
XLOC_015253 NA coding upstream 77661 10563499 ~ 10564386 (+)
XLOC_015252 BX927121.1 coding upstream 225775 10386479 ~ 10416272 (+)
XLOC_015251 NA coding upstream 356418 10284761 ~ 10285629 (+)
XLOC_015250 gadd45aa coding upstream 357475 10280645 ~ 10284572 (+)
XLOC_015256 evi5a coding downstream 22327 10709557 ~ 10760516 (+)
XLOC_015257 gfi1aa coding downstream 79514 10766744 ~ 10785866 (+)
XLOC_015258 glmna coding downstream 133897 10821127 ~ 10857898 (+)
XLOC_015259 tceanc2 coding downstream 191176 10878406 ~ 10880549 (+)
XLOC_015260 mrpl37 coding downstream 226793 10914023 ~ 10931770 (+)
XLOC_015249 FO704816.1 non-coding upstream 435929 10206001 ~ 10206118 (+)
XLOC_015261 CR450845.1 non-coding downstream 319427 11006657 ~ 11006790 (+)
XLOC_015265 BX901918.1 non-coding downstream 556656 11243886 ~ 11244007 (+)
XLOC_015266 NA non-coding downstream 941772 11629002 ~ 11633323 (+)
XLOC_015267 BX890600.1 non-coding downstream 960933 11648163 ~ 11648838 (+)
XLOC_015274 NA non-coding downstream 1948697 12635927 ~ 12637877 (+)

Expression

Expression of XLOC_015255(dipk1aa) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Expression of XLOC_015255(dipk1aa) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_03277921_03285364 FAM69AA, FAM69A coding CI01000004 null 3277741 ~ 3285364 (-)