XLOC_015260 (mrpl37)


Basic Information

Item Value
gene id XLOC_015260
gene name mrpl37
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 10914023 ~ 10931770 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030604
CGAAGAAGACTGACGTCACACATCATGGCCGCCTCCTGAGTGCAACGAGAAAATGTCATAACGACGAGCATCACTGTTTTACTGTTTAGTGGCTAACATATTCATTTTGAGCAGctattttatatcttgtaaaatgtTTAACACAACAATGCAGAGAATCAGAATATCAGCTTCTACAGTAACTCAAATCTGCAAATCCAAAGACTGCCTCGGTGTCCTCATCATGATTCCTCATGGACGTCGATGTTTGTCCTCCAGCTCTTGTTTATATGGGAAGGTTTTTCCGCGACAAAAGCCTCGCGTGGTCCCTGAGATAGCGGGACTGGAGCCTGTCACCTACGCCGACAGGATGCACTTCGTCCCCGGACTGGCAAAGCCGAGGTTTCCTAAATGGGAACGAGGATGGAAAAATCCCAATCACTACGAGAGCCCGAAACCAGAAGAGATGAAGCTGTTTAAAGATAAACCCTGCTACATCTTCAATCAGAGGACCAGTGTGGTGGAAGGTGTTCGACAAGCCCTTTGGCTCAGTAAGTCAGCCGTCATTAAAGAGTTTCCTGCTCAGATTCTTTCACTGGCTGAAgatccagccaatcagattgaagaTCAGGACGAGAGAGTGCAGAACGCCATTAAAAGCGCTTTACTGTGGGACACAACAGACGACCAGCCTCCCAGAGAGAGGTACTGCCCCATGCTTGTGCATAGACTGCTTCATCTGTGTGGAGTCCTGCAGGTCCGCCATCCGGAGCTGGCCAAGAGGATGCTAGCTGAGAAATACAATTTGGCAGCGACCTGGAGGAGAGGCGAGGATGTGTTCCAGGTTAGAGGTCATAACGGGTTGCTGTTAAACTCTATGAACCCTTTACCTGTGCTGGCGGGACCTGAGCAGATCCAGGGCACCGCTGATCAAGAGCTGGAAACTTTCTTCCCCATCGCACCCACCATTGACCTGCAGTGCACAAATGTTTACCAGGAGAAGAGCACCACAGGTTTCAGAGAGGGTTATCCTTGCCCTCATGCCCACACTCTTTATGTGATGGAAATGGGAAACACCCCAAAACTTCTCCCCGAGCAGCTCCGTGCTAAGATGATCATGTTCTGCTTTGGAAATGCTCTGGTCAGAGCAAAAGCCCTGTatgggGACGAGCCCAGAGTTCTGGAGAAGCCCATTGTGGTTCAGAGTGTGGCCACAAACGGCCGTATCTTCCAGTTTGTGGTGTTTCAGCTCAACACGACGGAGCTGCAGTCGGACAGCGGAGTGAAGAATCTGGTGTGGGTGGACGAGGATAAACCGCTTTATGAACACGCCCAGGCCCGGGCTCACATCAAGAGGAGAGTCGTCAAGATTCCTGCTGGTTTGTCAGGATATCAGCCTGAGACCTTCAAGAAGTTTCTGGCTCTCTTTCTCCACGGTGCTACATGAACAGAACAAACCCCTCTGGCAGAATATCACCATCACTTCAATATCTCTGACTcgcaaaataaagaaaattgtgGATAAAA

Function

symbol description
mrpl37 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in several structures, including adaxial cell; eye; liver; midbrain; and musculature system. Orthologous to human MRPL37 (mitochondrial ribosomal protein L37).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
ko03011 Ribosome
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-050309-20 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in several structures, including adaxial cell; eye; liver; midbrain; and musculature system. Orthologous to human MRPL37 (mitochondrial ribosomal protein L37).

Ensembl:

ensembl_id ENSDARG00000062916

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030604 True 1506 mRNA 0.49 7 10914023 10931770
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Neighbor

gene id symbol gene type direction distance location
XLOC_015259 tceanc2 coding upstream 33474 10878406 ~ 10880549 (+)
XLOC_015258 glmna coding upstream 56125 10821127 ~ 10857898 (+)
XLOC_015257 gfi1aa coding upstream 128157 10766744 ~ 10785866 (+)
XLOC_015256 evi5a coding upstream 153507 10709557 ~ 10760516 (+)
XLOC_015255 dipk1aa coding upstream 226793 10642047 ~ 10687230 (+)
XLOC_015261 CR450845.1 coding downstream 74887 11006657 ~ 11006790 (+)
XLOC_015262 acot11a coding downstream 97153 11028923 ~ 11063878 (+)
XLOC_015263 tyw3 coding downstream 187545 11119315 ~ 11126221 (+)
XLOC_015264 lhx8a coding downstream 274025 11205795 ~ 11210168 (+)
XLOC_015265 BX901918.1 coding downstream 312116 11243886 ~ 11244007 (+)
XLOC_015254 NA non-coding upstream 306694 10604513 ~ 10607329 (+)
XLOC_015253 NA non-coding upstream 349637 10563499 ~ 10564386 (+)
XLOC_015252 BX927121.1 non-coding upstream 497751 10386479 ~ 10416272 (+)
XLOC_015251 NA non-coding upstream 628394 10284761 ~ 10285629 (+)
XLOC_015249 FO704816.1 non-coding upstream 707905 10206001 ~ 10206118 (+)
XLOC_015266 NA non-coding downstream 697232 11629002 ~ 11633323 (+)
XLOC_015267 BX890600.1 non-coding downstream 716393 11648163 ~ 11648838 (+)
XLOC_015274 NA non-coding downstream 1704157 12635927 ~ 12637877 (+)

Expression

Expression of XLOC_015260(mrpl37) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Expression of XLOC_015260(mrpl37) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_03187077_03196194 MRPL37 coding CI01000004 null 3187077 ~ 3196198 (-)