XLOC_015261 (CR450845.1)


Basic Information

Item Value
gene id XLOC_015261
gene name CR450845.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 11006657 ~ 11006790 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030605
TTCAACTGTGAAAGCAATGAATCACTCTCGACCTGTGAATACAGACAACTGAGTGCTTACAGCTGAATCACTGAGCCTGGCCTGgacagtacctggatgggagaccacatgggaaaactaggttgcggATGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083895

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030605 True 134 rRNA 0.49 1 11006657 11006790
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015260 mrpl37 coding upstream 74887 10914023 ~ 10931770 (+)
XLOC_015259 tceanc2 coding upstream 126108 10878406 ~ 10880549 (+)
XLOC_015258 glmna coding upstream 148759 10821127 ~ 10857898 (+)
XLOC_015257 gfi1aa coding upstream 220791 10766744 ~ 10785866 (+)
XLOC_015256 evi5a coding upstream 246141 10709557 ~ 10760516 (+)
XLOC_015262 acot11a coding downstream 22133 11028923 ~ 11063878 (+)
XLOC_015263 tyw3 coding downstream 112525 11119315 ~ 11126221 (+)
XLOC_015264 lhx8a coding downstream 199005 11205795 ~ 11210168 (+)
XLOC_015265 BX901918.1 coding downstream 237096 11243886 ~ 11244007 (+)
XLOC_015266 NA coding downstream 622212 11629002 ~ 11633323 (+)
XLOC_015254 NA non-coding upstream 399328 10604513 ~ 10607329 (+)
XLOC_015253 NA non-coding upstream 442271 10563499 ~ 10564386 (+)
XLOC_015252 BX927121.1 non-coding upstream 590385 10386479 ~ 10416272 (+)
XLOC_015251 NA non-coding upstream 721028 10284761 ~ 10285629 (+)
XLOC_015249 FO704816.1 non-coding upstream 800539 10206001 ~ 10206118 (+)
XLOC_015267 BX890600.1 non-coding downstream 641373 11648163 ~ 11648838 (+)
XLOC_015274 NA non-coding downstream 1629137 12635927 ~ 12637877 (+)
XLOC_015275 BX908750.1 non-coding downstream 1791576 12798366 ~ 12802906 (+)

Expression

Expression of XLOC_015261(CR450845.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Expression of XLOC_015261(CR450845.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network