XLOC_015262 (acot11a)


Basic Information

Item Value
gene id XLOC_015262
gene name acot11a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 11028923 ~ 11063878 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030606
TGTTGGTCAACAAACTAAACGACAAACCGCAGGTGTCGACACATTCCGTGCAGTGAGCAAACAAACATAATTTACTTTGACGTTTGTCATTGTTTTGACGTAAGAAAGAAGTATAAAAACAAggacattaagactttttaaagaacaTGTGCAAACATGGAGCAACGGGGCGGGGTCTCAGTGAATGAACACTagctcacagacacacacgcactgCTAAACTAGTTAGTGAACACTACGAGCGGCTGAAGCGGCGTTTTGTTGACCTCTAGGGCGCCGCAGGGCTTCCGTGAACACCGTCAATCCAGTTATGATCATCCAAGAAGGCTTGCTGTTTTGAATTCATACAGACTCCTAAGGCAAGTTTGCGCTCATCATGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCCGAGAGACACGCTGGATGTCCCTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATCGGggTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACAGAGCCTTCAACTCTAGCATGGAGgTGGGGATAGAGGTCAGCTGTGAAGACCTGTACAGGGGCCGTCATTGGAGAGTCTGTCAGGCGTTTGCCACATTTGTCGCCAGACGCACAGATGCAAACAAGGTGCAGCTGAAGCAGGTTGTGCCCTGTACACATCAGGAGCAGCTGGAGCACAGTTTAGCAGCCGAGAGGAGGAGGATGAGACTCGTTCATCATGACACCATGCAGGACTTGCTCAACAACAAAACCTTCCAGAGAAGCTGCAGTGAGGAGAACCGTGATGAAGATGCAGCTGTGCCCACCGAAAGAACAAGAGTGGAGAGTGTGGAGCTGGTACTTCCTCCTCATGCCAATCACCAGGTCAACACATTCGGCGGCCAGATTATGGCCTGGATGGAAAACGTCGCAACTATTGCCGCCAGTCGTTTATGCAATGCTCATCCTACTCTGAGGGCCATAGACATGTTTCACTTCAGAGGCCCTTCTCAGGTCGGAGATCGGTTGATTCTGAAAGCCATTGTCAACAACACCTTCAAGAACAGTATGGAGGTTGGCGTCTGTGCAGAGGCGTATATTGGAGAGGAGCCTCTGAGGCACATTAACAGCGCCTTCATGACATTTGAGGTGCTGGATGACAAAGGAAGGCCACGTCCGCTGCCTTTGATAAAACCTGAACCTAAGGAGGGACAGAGGAGATATCAGGAGGCTCTTGCTAGGAAGAAGATTCGACTTGATAGGAAGTACATCATCTCATGTAAGCAGACCGAGGTGCCACTTTCTGTCCCATGGGACCCCAGTAACCAGGTATACTTGAGCTACAATAATGTGTGGGCCTTAAAAATGCTTGCAGCCAAAAACAACTGGGACCTGATCTCAAAGAAGAACCGTGTGAGTCTGTATACTGTGGAGGAGAGTCAGAGTCTGTGTTTCAAGGTGGAGGCAGAGATGGAGATCCCAGCACAGAGAGCCTTCACCCTTCTCTCAGATCTCAGCCGCAGACAGGAATGGGACGAACACTATACTCGATGTGAACCACTCGTTAAGGTGGATGAAGATGATTTCATCTATCGAGTTATTACTCCTTCAGTCAGTCAAGGAGGAAAAGTTCAGGACTTCATTTTACTGGCGTCTAGAAGGCCTCCCTGTGATAGCGGgGATCCATATGTTATTGCATTAAGATCAGTTACTCTCCCCACTCACCCGCCCACAGAGGGGTTCAACAGGGGGGAGGTGGTCTGTGCCGGCTTCACCATTTATGAGCTGTCACAAGGTGTCTCTAAGATTTCCTACTACAATCAGGCCAGTCCAGAAGTGCTGCCGTACATCTCCACGGACATTGCAGGCCTCTCGTCCAGTTTCTCCTCAACATTCCACTCATGCAGCCAGTACCTGATGGACAACATCATCAGCACACCTGAATTCACCTCACCTACATCATCATAA
>TCONS_00030607
gCTAAACTAGTTAGTGAACACTACGAGCGGCTGAAGCGGCGTTTTGTTGACCTCTAGGGCGCCGCAGGGCTTCCGTGAACACCGTCAATCCAGTTATGATCATCCAAGAAGGCTTGCTGTTTTGAATTCATACAGACTCCTAAGCTCATCATGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGgTGGGGATAGAGGTCAGCTGTGAAGACCTGTACAGGGGCCGTCATTGGAGAGTCTGTCAGGCGTTTGCCACATTTGTCGCCAGACGCACAGATGCAAACAAG
>TCONS_00030608
gCTAAACTAGTTAGTGAACACTACGAGCGGCTGAAGCGGCGTTTTGTTGACCTCTAGGGCGCCGCAGGGCTTCCGTGAACACCGTCAATCCAGTTATGATCATCCAAGAAGGCTTGCTGTTTTGAATTCATACAGACTCCTAAGGCAAGTTTGCGCTCATCATGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCCGAGAGACACGCTGGATGTCCCTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATCGGggTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACAGAGCCTTCAACTCTAGCATGGAGgTGGGGATAGAGGTCAGCTGTGAAGACCTGTACAGGGGCCGTCATTGGAGAGTCTGTCAGGCGTTTGCCACATTTGTCGCCAGACGCACAGATGCAAACAAGGTGCAGCTGAAGCAGGTTGTGCCCTGTACACATCAGGAGCAGCTGGAGCACAGTTTAGCAGCCGAGAGGAGGAGGATGAGACTCGTTCATCATGACACCATGCAGGACTTGCTCAACAACAAAACCTTCCAGAGAAGCTGCAAGAACCGTGATGAAGATGCAGCTGTGCCCACCGAAAGAACAAGAGTGGAGAGTGTGGAGCTGGTACTTCCTCCTCATGCCAATCACCAGGTCAACACATTCGGCGGCCAGATTATGGCCTGGATGGAAAACGTCGCAACTATTGCCGCCAGTCGTTTATGCAATGCTCATCCTACTCTGAGGGCCATAGACATGTTTCACTTCAGAGGCCCTTCTCAGGTCGGAGATCGGTTGATTCTGAAAGCCATTGTCAACAACACCTTCAAGAACAGTATGGAGGTTGGCGTCTGTGCAGAGGCGTATATTGGAGAGGAGCCTCTGAGGCACATTAACAGCGCCTTCATGACATTTGAGGTGCTGGATGACAAAGGAAGGCCACGTCCGCTGCCTTTGATAAAACCTGAACCTAAGGAGGGACAGAGGAGATATCAGGAGGCTCTTGCTAGGAAGAAGATTCGACTTGATAGGAAGTACATCATCTCATGTAAGCAGACCGAGGTGCCACTTTCTGTCCCATGGGACCCCAGTAACCAGGTATACTTGAGCTACAATAATGTGTGGGCCTTAAAAATGCTTGCAGCCAAAAACAACTGGGACCTGATCTCAAAGAAGAACCGTGTGAGTCTGTATACTGTGGAGGAGAGTCAGAGTCTGTGTTTCAAGGTGGAGGCAGAGATGGAGATCCCAGCACAGAGAGCCTTCACCCTTCTCTCAGATCTCAGCCGCAGACAGGAATGGGACGAACACTATACTCGATGTGAACCACTCGTTAAGGTGGATGAAGATGATTTCATCTATCGAGTTATTACTCCTTCAGTCAGTCAAGGAGGAAAAGTTCAGGACTTCATTTTACTGGCGTCTAGAAGGCCTCCCTGTGATAGCGGgGATCCATATGTTATTGCATTAAGATCAGTTACTCTCCCCACTCACCCGCCCACAGAGGGGTTCAACAGGGGGGAGGTGGTCTGTGCCGGCTTCACCATTTATGAGCTGTCACAAGGTGTCTCTAAGATTTCCTACTACAATCAGGCCAGTCCAGAAGTGCTGCCGTACATCTCCACGGACATTGCAGGCCTCTCGTCCAGTTTCTCCTCAACATTCCACTCATGCAGCCAGTACCTGATGGACAACATCATCAGCACACCTGAATTCACCTCACCTACATCATCATAATCTCCTCGACTCATTAAAAGCGGCCACTTCTAATGCTTTTCTAGAATTTCAGTTTTGCACTTCAAGCTACAGTATGTAACTTATGGAGCTCTTGTGGATACATTGTGTACATGGTCACGGTCACACTAGAGATTAAACTTGCAATATTCTGTTgtatggcactgcgaaaagggtcGGAAGTAAACAagttgattagaca
>TCONS_00030609
CTAGTTAGTGAACACTACGAGCGGCTGAAGCGGCGTTTTGTTGACCTCTAGGGCGCCGCAGGGCTTCCGTGAACACCGTCAATCCAGTTATGATCATCCAAGAAGGCTTGCTGTTTTGAATTCATACAGACTCCTAAGGCAAGTTTGCGCTCATCATGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCCGAGAGACACGCTGGATGTCCCTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATCGGggTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACACATTCGGCGGCCAGATTATGGCCTGGATGGAAAACGTCGCAACTATTGCCGCCAGTCGTTTATGCAATGCTCATCCTACTCTGAGGGCCATAGACATGTTTCACTTCAGAGGCCCTTCTCAGGTCGGAGATCGGTTGATTCTGAAAGCCATTGTCAACAACACCTTCAAGAACAGGTGGGCTTG
>TCONS_00030610
ATCATGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCCGAGAGACACGCTGGATGTCCCTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATCGGggTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACAGAGCCTTCAACTCTAGCATGGAGgTGGGGATAGAGGTCAGCTGTGAAGACCTGTACAGGGGCCGTCATTGGAGAGTCTGTCAGGCGTTTGCCACATTTGTCGCCAGACGCACAGATGCAAACAAGGTGCAGCTGAAGCAGGTTGTGCCCTGTACACATCAGGAGCAGCTGGAGCACAGTTTAGCAGCCGAGAGGAGGAGGATGAGACTCGTTCATCATGACACCATGCAGGACTTGCTCAACAACAAAACCTTCCAGAGAAGCTGCAAGAACCGTGATGAAGATGCAGCTGTGCCCACCGAAAGAACAAGAGTGGAGAGTGTGGAGCTGGTACTTCCTCCTCATGCCAATCACCAGGTCAACACATTCGGCGGCCAGATTATGGCCTGGATGGAAAACGTCGCAACTATTGCCGCCAGTCGTTTATGCAATGCTCATCCTACTCTGAGGGCCATAGACATGTTTCACTTCAGAGGCCCTTCTCAGGTCGGAGATCGGTTGATTCTGAAAGCCATTGTCAACAACACCTTCAAGAACAGTATGGAGGTTGGCGTCTGTGCAGAGGCGTATATTGGAGAGGAGCCTCTGAGGCACATTAACAGCGCCTTCATGACATTTGAGGTGCTGGATGACAAAGGAAGGCCACGTCCGCTGCCTTTGATAAAACCTGAACCTAAGGAGGGACAGAGGAGATATCAGGAGGCTCTTGCTAGGAAGAAGATTCGACTTGATAGGAAGTACATCATCTCATGTAAGCAGACCGAGGTGCCACTTTCTGTCCCATGGGACCCCAGTAACCAGGTATACTTGAGCTACAATAATGTGTGGGCCTTAAAAATGCTTGCAGCCAAAAACAACTGGGACCTGATCTCAAAGAAGAACCGTGTGAGTCTGTATACTGTGGAGGAGAGTCAGAGTCTGTGTTTCAAGGTGGAGGCAGAGATGGAGATCCCAGCACAGAGAGCCTTCACCCTTCTCTCAGATCTCAGCCGCAGACAGGAATGGGACGAACACTATACTCGATGTGAACCACTCGTTAAGGTGGATGAAGATGATTTCATCTATCGAGTTATTACTCCTTCAGTCAGTCAAGGAGGAAAAGTTCAGGACTTCATTTTACTGGCGTCTAGAAGGCCTCCCTGTGATAGCGGgGATCCATATGTTATTGCATTAAGATCAGTTACTCTCCCCACTCACCCGCCCACAGAGGGGTTCAACAGGGGGGAGGTGGTCTGTGCCGGCTTCACCATTTATGAGCTGTCACAAGGTGTCTCTAAGATTTCCTACTACAATCAGGCCAGTCCAGAAGTGCTGCCGTACATCTCCACGGACATTGCAGGCCTCTCGTCCAGTTTCTCCTCAACATTCCACTCATGCAGCCAGTACCTGATGGACAACATCATCAGCACACCTGAATTCACCTCACCTACATCATCATAATCTC
>TCONS_00030611
TGGCATCATTAGAGTCCAGGCTAAAGGAGGATCTGCATGACCTTCATCTGGAGGATGGAGCTCAGCATCGCAACCCTTCAGAAGTGAAGATGAGCCAGATCGTGTTGCCCTGCCATGCCAACCACTGCGGAGAGCTGAGCGTCGGGCAGCTGCTCAAATGGATGGACTGCACAGCATGTCTGTCTGCCGAGAGACACGCTGGATGTCCCTGTGTGACAGCGTCTGTTGATGACATCTACTTCGAGCACACCATCGGggTTGGACAAGTGGTCAACATTAAAGCCAAAGTCAACAGAGCCTTCAACTCTAGCATGGAGgTGGGGATAGAGGTCAGCTGTGAAGACCTGTACAGGGGCCGTCATTGGAGAGTCTGTCAGGCGTTTGCCACATTTGTCGCCAGACGCACAGATGCAAACAAGccacaaccacgactactactactactgatactactacaacaatgactactactactgatactactacaacaatgactactacaGCGTCTACTACAattgatactactacaacaacatctt
>TCONS_00030612
GAGAAGCACTGCTCATGATATTGGCTAcatttaatgaaaatacaatatatagttttatataattttagtttTGTATGCTACTGTTGTTAAGAAAAATAATGTGCCCAACAGattgtgttttaatttttcaGGTATACTTGAGCTACAATAATGTGTGGGCCTTAAAAATGCTTGCAGCCAAAAACAACTGGGACCTGATCTCAAAGAAGAACCGTGTGAGTCTGTATACTGTGGAGGAGAGTCAGAGTCTGTGTTTCAAGGTGGAGGCAGAGATGGAGATCCCAGCACAGAGAGCCTTCACCCTTCTCTCAGATCTCAGCCGCAGACAGGAATGGGACGAACACTATACTCGATGTGAACCACTCGTTAAGGTGGATGAAGATGATTTCATCTATCGAGTTATTACTCCTTCAGTCAGTCAAGGAGGAAAAGTTCAGGACTTCATTTTACTGGCGTCTAGAAGGCCTCCCTGTGATAGCGGgGATCCATATGTTATTGCATTAAGATCAGTTACTCTCCCCACTCACCCGCCCACAGAGGGGTTCAACAGGGGGGAGGTGGTCTGTGCCGGCTTCACCATTTATGAGCTGTCACAAGGTGTCTCTAAGATTTCCTACTACAATCAGGCCAGTCCAGAAGTGCTGCCGTACATCTCCACGGACATTGCAGGCCTCTCGTCCAGTTTCTCCTCAACATTCCACTCATGCAGCCAGTACCTGATGGACAACATCATCAGCACACCTGAATTCACCTCACCTACATCATCATAATCTCCTCGACTCATTAAAAGCGGCCACTTCTAATGCTTTTCTAGAATTTCAGTTTTGCACTTCAAGCTACAGTATGTAACTTATGGAGCTCTTGTGGATACATTGTGTACATGGTCACGGTCACACTAGAGATTAAACTTGCAATATTCTGTTgtatggcactgc

Function

symbol description
acot11a Predicted to enable acyl-CoA hydrolase activity and long-chain fatty acyl-CoA binding activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to be active in cytosol. Is expressed in cloaca; lens; proctodeum; and solid lens vesicle. Orthologous to human ACOT11 (acyl-CoA thioesterase 11).

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0006637 acyl-CoA metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0036042 long-chain fatty acyl-CoA binding molecular_function
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0000062 fatty-acyl-CoA binding molecular_function
GO:0016790 thiolester hydrolase activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-538 Predicted to enable acyl-CoA hydrolase activity and long-chain fatty acyl-CoA binding activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to be active in cytosol. Is expressed in cloaca; lens; proctodeum; and solid lens vesicle. Orthologous to human ACOT11 (acyl-CoA thioesterase 11).

Ensembl:

ensembl_id ENSDARG00000058229

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030606 False 2116 mRNA 0.50 16 11028923 11063679
TCONS_00030607 False 439 mRNA 0.53 3 11029138 11039033
TCONS_00030608 False 2094 mRNA 0.50 16 11029138 11063878
TCONS_00030609 False 634 mRNA 0.52 6 11029144 11048165
TCONS_00030610 False 1741 mRNA 0.51 15 11031360 11063683
TCONS_00030611 False 539 mRNA 0.50 5 11031364 11043067
TCONS_00030612 True 935 lncRNA 0.44 5 11055316 11063844

Neighbor

gene id symbol gene type direction distance location
XLOC_015261 CR450845.1 coding upstream 22133 11006657 ~ 11006790 (+)
XLOC_015260 mrpl37 coding upstream 97153 10914023 ~ 10931770 (+)
XLOC_015259 tceanc2 coding upstream 148374 10878406 ~ 10880549 (+)
XLOC_015258 glmna coding upstream 171025 10821127 ~ 10857898 (+)
XLOC_015257 gfi1aa coding upstream 243057 10766744 ~ 10785866 (+)
XLOC_015263 tyw3 coding downstream 55437 11119315 ~ 11126221 (+)
XLOC_015264 lhx8a coding downstream 141917 11205795 ~ 11210168 (+)
XLOC_015265 BX901918.1 coding downstream 180008 11243886 ~ 11244007 (+)
XLOC_015266 NA coding downstream 565124 11629002 ~ 11633323 (+)
XLOC_015267 BX890600.1 coding downstream 584285 11648163 ~ 11648838 (+)
XLOC_015254 NA non-coding upstream 421594 10604513 ~ 10607329 (+)
XLOC_015253 NA non-coding upstream 464537 10563499 ~ 10564386 (+)
XLOC_015252 BX927121.1 non-coding upstream 612651 10386479 ~ 10416272 (+)
XLOC_015251 NA non-coding upstream 743294 10284761 ~ 10285629 (+)
XLOC_015274 NA non-coding downstream 1572049 12635927 ~ 12637877 (+)
XLOC_015275 BX908750.1 non-coding downstream 1734488 12798366 ~ 12802906 (+)

Expression


Co-expression Network