Item | Value |
---|---|
gene id | XLOC_015276 |
gene name | kmt2cb |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 12847602 ~ 13037544 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
kmt2cb | Predicted to enable histone binding activity; histone methyltransferase activity (H3-K4 specific); and transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within chromatin organization; methylation; and regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of MLL3/4 complex. Human ortholog(s) of this gene implicated in Klatskin's tumor; Kleefstra syndrome 2; esophagus squamous cell carcinoma; and squamous cell carcinoma. Orthologous to human KMT2C (lysine methyltransferase 2C). |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
GO:0044666 | MLL3/4 complex | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0042393 | histone binding | molecular_function |
GO:0046872 | metal ion binding | molecular_function |
GO:0042800 | histone methyltransferase activity (H3-K4 specific) | molecular_function |
GO:0003713 | transcription coactivator activity | molecular_function |
id | description |
---|---|
ZDB-GENE-070705-340 | Predicted to enable histone binding activity; histone methyltransferase activity (H3-K4 specific); and transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within chromatin organization; methylation; and regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of MLL3/4 complex. Human ortholog(s) of this gene implicated in Klatskin's tumor; Kleefstra syndrome 2; esophagus squamous cell carcinoma; and squamous cell carcinoma. Orthologous to human KMT2C (lysine methyltransferase 2C). |
ensembl_id | ENSDARG00000075560 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00030636 | False | 3282 | mRNA | 0.48 | 14 | 12847602 | 12956329 |
TCONS_00030637 | False | 17074 | mRNA | 0.47 | 61 | 12847614 | 13037544 |
TCONS_00033242 | True | 1088 | lncRNA | 0.42 | 3 | 12847660 | 12852426 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_015275 | BX908750.1 | coding | upstream | 44696 | 12798366 ~ 12802906 (+) |
XLOC_015274 | NA | coding | upstream | 209725 | 12635927 ~ 12637877 (+) |
XLOC_015273 | arhgap21b | coding | upstream | 440961 | 12302527 ~ 12406641 (+) |
XLOC_015272 | prtfdc1 | coding | upstream | 567094 | 12255568 ~ 12280508 (+) |
XLOC_015271 | cdc73 | coding | upstream | 844427 | 11946554 ~ 12003175 (+) |
XLOC_015277 | BX324233.1 | coding | downstream | 12681 | 13050225 ~ 13051517 (+) |
XLOC_015278 | prkag2b | coding | downstream | 19258 | 13056802 ~ 13148453 (+) |
XLOC_015279 | BX511000.1 | coding | downstream | 86022 | 13123566 ~ 13123682 (+) |
XLOC_015280 | NA | coding | downstream | 309856 | 13347400 ~ 13351299 (+) |
XLOC_015281 | cfap57 | coding | downstream | 424761 | 13462305 ~ 13673494 (+) |
XLOC_015267 | BX890600.1 | non-coding | upstream | 1198764 | 11648163 ~ 11648838 (+) |
XLOC_015266 | NA | non-coding | upstream | 1214279 | 11629002 ~ 11633323 (+) |
XLOC_015265 | BX901918.1 | non-coding | upstream | 1603595 | 11243886 ~ 11244007 (+) |
XLOC_015285 | NA | non-coding | downstream | 912514 | 13950058 ~ 13958576 (+) |
XLOC_015286 | NA | non-coding | downstream | 923585 | 13961129 ~ 13962397 (+) |
XLOC_015287 | NA | non-coding | downstream | 1182484 | 14220028 ~ 14220637 (+) |