XLOC_015277 (BX324233.1)


Basic Information

Item Value
gene id XLOC_015277
gene name BX324233.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 13050225 ~ 13051517 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030638
CAAATACGTATGTTAGAATACTTTTTATGGATTTCTCAGCTGCTTTTAATACTGTTCAACCTAATCTTCTTTTAGAACGTCTTTATAATTTAGGAGTAAGTAACTGGTTGATTATATGGATCAGAGAGTTTTTAAAAAACCGACAACAACGTGTCTGTGTCAATCATGCTATGTCTGACTGCTCTGTTTTAAATATAGGGGTACCTCAGGGATGTGTACTATCACctcttttattttctatatatattaatgaactgCAGTGCAATATTGATGACAATCTCACACTCATAAAATATGCTGATGATCTGGCATTGGTTTCCTGTCAGGAAGAAATGAATAGCtctttatattttagatatattgatAGTATTATAGATTGGTTTGGCAAAAGTTCATTACACCTAAATATTGGGAAAACAAAAGAGTTATGTCTGGGGAGTCAAACAAGAAGAGTAGATACTGGACTCTTTAAACCAGTCACCATAAACGGACAAATAGTAGAGCAGGTTTCAAATTTCAAGTATTtaggcacaattattgacaataaattgaattttaatagtaatgtagAGGCGGTTTATAAGAAAGCAAGTCAGCGCCTCTATCTCCTCCGCAAAttgagaagttttaatgttagtacacagactttaaacttggcatatagatcacttatagagagtgttctcacatataatattgtttcatggtttggtaacacaacacttaaacagaaaaagaaattagcgcaaattatcaatcaggcaaataagataactggtcacaaacagcattcattgaagattttatttgactcttttatggaaaaaagagcagttgtgatttttaaagataatacacacccccttcactcagcatttgaattgctaccatcaggacgcaggtttagaattcctaaagcacgaagaaatgcctataaaaagtcatttatcccaatggcaGTTGTTGTTCTGAACTGGATCAATGTTTGTAGTGAATGAGGTGGTTACCAAGTATGATTTGCAGTATTGTGTatggggctaatttggtttttaaacttttaacttatgttgttgtgttgataagtgttattgtgtcgttgttgtatgtttgtaattgttgtcctaaatgcagtgttgaagaaaaatttcctttctgtgtcaagcagaacggacaataaataaagtttaaactaactTGGCCAAAATGATGGAGGAccaatgtgggccacagttggctaAAAAGTActatagtcatttaagggtaatctgagTTTAAATCTAAAGTGGTTTACAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114675

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030638 True 1293 mRNA 0.34 1 13050225 13051517
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015276 kmt2cb coding upstream 12681 12847602 ~ 13037544 (+)
XLOC_015275 BX908750.1 coding upstream 247319 12798366 ~ 12802906 (+)
XLOC_015274 NA coding upstream 412348 12635927 ~ 12637877 (+)
XLOC_015273 arhgap21b coding upstream 643584 12302527 ~ 12406641 (+)
XLOC_015272 prtfdc1 coding upstream 769717 12255568 ~ 12280508 (+)
XLOC_015278 prkag2b coding downstream 5285 13056802 ~ 13148453 (+)
XLOC_015279 BX511000.1 coding downstream 72049 13123566 ~ 13123682 (+)
XLOC_015280 NA coding downstream 295883 13347400 ~ 13351299 (+)
XLOC_015281 cfap57 coding downstream 410788 13462305 ~ 13673494 (+)
XLOC_015282 ebna1bp2 coding downstream 642933 13694450 ~ 13721149 (+)
XLOC_015267 BX890600.1 non-coding upstream 1401387 11648163 ~ 11648838 (+)
XLOC_015266 NA non-coding upstream 1416902 11629002 ~ 11633323 (+)
XLOC_015265 BX901918.1 non-coding upstream 1806218 11243886 ~ 11244007 (+)
XLOC_015285 NA non-coding downstream 898541 13950058 ~ 13958576 (+)
XLOC_015286 NA non-coding downstream 909612 13961129 ~ 13962397 (+)
XLOC_015287 NA non-coding downstream 1168511 14220028 ~ 14220637 (+)

Expression

Expression of XLOC_015277(BX324233.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Expression of XLOC_015277(BX324233.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network