XLOC_015279 (BX511000.1)


Basic Information

Item Value
gene id XLOC_015279
gene name BX511000.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 13123566 ~ 13123682 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030641
tgccacagccatatcaccctgtagCCCAAGACCAGTTtctcactgaagctaagtagggctgagtctggtcagtacctggataggagaccacataggaaaactaggttgctattggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108294

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030641 True 117 rRNA 0.49 1 13123566 13123682
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015277 BX324233.1 coding upstream 72049 13050225 ~ 13051517 (+)
XLOC_015276 kmt2cb coding upstream 86022 12847602 ~ 13037544 (+)
XLOC_015275 BX908750.1 coding upstream 320660 12798366 ~ 12802906 (+)
XLOC_015274 NA coding upstream 485689 12635927 ~ 12637877 (+)
XLOC_015273 arhgap21b coding upstream 716925 12302527 ~ 12406641 (+)
XLOC_015280 NA coding downstream 223718 13347400 ~ 13351299 (+)
XLOC_015281 cfap57 coding downstream 338623 13462305 ~ 13673494 (+)
XLOC_015282 ebna1bp2 coding downstream 570768 13694450 ~ 13721149 (+)
XLOC_015283 zbtb41 coding downstream 598206 13721888 ~ 13800596 (+)
XLOC_015284 cpdp coding downstream 783770 13907452 ~ 13940917 (+)
XLOC_015267 BX890600.1 non-coding upstream 1474728 11648163 ~ 11648838 (+)
XLOC_015266 NA non-coding upstream 1490243 11629002 ~ 11633323 (+)
XLOC_015265 BX901918.1 non-coding upstream 1879559 11243886 ~ 11244007 (+)
XLOC_015285 NA non-coding downstream 826376 13950058 ~ 13958576 (+)
XLOC_015286 NA non-coding downstream 837447 13961129 ~ 13962397 (+)
XLOC_015287 NA non-coding downstream 1096346 14220028 ~ 14220637 (+)
XLOC_015288 NA non-coding downstream 1201374 14325056 ~ 14332878 (+)

Expression

Expression of XLOC_015279(BX511000.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Expression of XLOC_015279(BX511000.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network