XLOC_015283 (zbtb41)


Basic Information

Item Value
gene id XLOC_015283
gene name zbtb41
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 13721888 ~ 13800596 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030647
ccacaatgctATGCTATCAAAACACGGTCGAATTtcttgttgctgttgttattgtttttattattaattataataaattaaaatatatgcaaTAACAAATTTTATTACAATGTATGCTAGAATACTTTCGGACGATGAATTAAGGTTTTATAGCCTAACGTTACGTTGAACAATGAAACAGGAAGACGTTTCGCCTTTAGCCAATGACAAAACACCTTTTTGAGACGACAGAACCCCTGCACGATGGAAAAGGACTCGTTCTTTATAGTCGGAACAAACgtatattttgttatttgtaaACAATGTGACAAAACAAAACCGTGCGTTTCGTTATTTTAAAGGTAACACTGCGAAcaagaaacatgttttttttgcCGTTTGTCCACGGAACATTTTAGGGTCGTTTGTCAAGTCTCTCCTGTTATAGAGTGGCCCTGTGGATTTATGTCAGTATTAGGGGGTCATACTGctcTGAAAGTGGAATATTTGAGTTGAAAGCCCCAAACATGAAGAAGAAACTCAATCCAAAAGAAACACAGGAGACAACAACAGCATGCAATTCCAAAAGGGATGTTGGCATGACTATTAAAGATTTTTCACTGGAAAAGAAGTGTTTGCGAATATCTCAAAATGATGGTTGTTTCCTTAAGTTCCTGAACGAAGACCGCCACAAGCTGTCATCATTCTGTGACACAACTGTTACAGTTTCTGGGAGGATATATCATGCACACAAGGTTGTTTTGGCATTTGGAAGTGGATATTTTCATTCCAGATTCAGTGAAAATCCTGAACTCCATCATGTTAGTATTGATAACATGGAGGGCTCCACCTTTGGACACCTGCTCAACTTTTTGTACACTTCTGAATTTGAAGTTTCAGAATGTCAAATCCCTGCTTTGGCTGAAGCTGCCTGTTTTCTTGATATGATGGAAGCTGTAAACATTTTAGCAAAGTGGGCAGCACCAGCTAATGCTGATGAAGAAAGTGAAGTTCCAGAGGAGATCCCAAATTTCCAAAACATCCAAACTTCATCTGGAACCAAGTGTTTATTTTGCAGTCGCACATTCAATTACAAAAAGTCTCTAGAGAATCACTTGGCCAAGACACACAGCACCGGTTGCCATAATGAGGAAGAACAAACTGTGGTGAGCACATCTGTGGTCACAATTCGCAGATCTGCACGTCAGAGGAGGGTACCTGCTAAATTTAAGAGCCAGGATAGTGAAAACGAGTGTGTTGTATCTGCAAAGCCGAACCAAAAAATTGCAAATCACAACTCTGTTACTtatgaggaggaggaagaggataaTGAAAGCAAAGAAGAGAATGAAAACGAGCAGATACAGCAGGAAAGTTGGAAAGAGGGGCAAGAAGAAACATTTGTAGCTTTGGAGGTTGAGGCTGCAGAATATGAAGACTGTGAGAAGCCAAAGGAGGCATGTGTCTCTGAGGCCCAGAAGGAGACTGAACCAGCATTCAGTCATGCTCTTGAGGAGCACAACCAAAAGACAGAGGTCTCTAGTCATATTTTTCCAGAAGGACTGGCTCCTGTTGTGATCCATAGCACTAACAAAAAGAGTCTCAAGTGTCCTAAATGCGACAAGATTTTTGATCGTAAAGGTAAATACGAGAGTCACACCAGAGTACACACGGGAGAAAAACCATTCCAGTGTGACATCTGTCTTCAATGCTACTCCACCAAATCAAACCTCACTGTGCACAAGAAGAAACATGATAGTGGCACACCTGTTCAAAGGAAAGAGCACAAATGTCCCTTCTGCAACAAGCTTCATGCCAGCAAGAAGACTCTAAGCAGACATGTGAAGAGATTTCATCCTGACCACCTGCAGGAGTTTCTCACTCAGAAGAAGAAGAGTGAAGTGTGGAAATGTGATATCTGTCACAAGTCCTTCAGCCGTCGCCCCCACCTGGAGGAGCACATGATCTTACATTCACAGGATAAACCCTTTAAGTGTGCCTACTGTGATGACTACTTTAAGTCACGGTTTGCCAGGCTAAAGCACCAAGAAAAGTTCCATTTAGGACCATTCCCTTGTGACATCTGTGGTCGTCAGTTTAATGACACAGGCAACCGCAAACGTCATATAGAGTGCACACATGGGGGAAAGAGGAAATGGACCTGTTTTCTGTGCGGCAAATCAGTTCGAGAGAGGACAACACTGAGGGAGCATCTAAGGATCCATAGTGGGGAAAAACCTCACCTGTGCAGCATCTGTGGACAAAGTTTTCGTCACGGAAGCTCCTACAGacttCACCTTCGTGTTCATCATGAGGACAAGCGATATGAATGTGAAGAATGTGGAAAAACATTTATTCGCCATGATCATCTAAAGAAGCACAAAAAAATCCATACAGGGGAAAAAGCACACCAGTGTGAAGAGTGTGGAAAATGCTTCCGACGTGCCGATCACTTGACCGTCCATTACAAAAGCATTCACCTGGGAGAAAAGATATGGCAAAGGTATAAAGCAGTAGTGCATCAGTGTCAGGTGTGCAAGAAAGAGTTCAGGGGGAAAACCAACCTCATGTCACACTTCAGAACACATTCAGGTGAGAAACCCCACAAGTGTGTGATCTGTAACCAGACGTTCAGCATCAAGAAAACTTTGACCAAACACATGGTTATTCATTCAGATGTACGTCCTTTCAACTGCCCACACTGCAGTGCTACCTTCAAGCGTAAGGACAAGCTCAAGTATCACGTTGATCATGTGCACAGTGTTCGTCTGCTTGACCAGCAGCAGAATCAGCCTGCCAGCCCTGCTAACAAGTTAATCGACCCAtcactgtcaaataaaaattccAAACCATGTCAAAATGCATCTAAGACTGTGCTGCAGAGTGTGGCAGCTGATGTTTGTGTTCCTGTGACACTCATTCCTGTACAGATGACTGAGGAAGCTGATCTTGCTGTTCATGGAGTGCCACATGGCATTCTTCCTGCTTTAAGCCAGCCACAGCAGAGCTACCAGTCTGCCACTGACTTAGTATTCTTGGAAAAATACACTCTCACACCTCAGCCAACCAATATAGTGCATCCAGTGCGAGTAGAACAAATGCTGGACCCTCGAGAGCAGTCTTACCTAGGCACACTTCTGGGACTGGACTCAGCTACACCTGTACAAAACACGTCTAGTGCTGAACATACTCAATAA
>TCONS_00030648
CAGAACCCCTGCACGATGGAAAAGGACTCGTTCTTTATAGTCGGAACAAACgtatattttgttatttgtaaACAATGTGACAAAACAAAACCGTGCGTTTCGTTATTTTAAAGGTAACACTGCGAAcaagaaacatgttttttttgcCGTTTGTCCACGGAACATTTTAGGGTCGTTTGTCAAGTCTCTCCTGTTATAGAGTGGCCCTGTGGATTTATGTCAGTATTAGGGGGTCATACTGctcTGAAAGTGGAATATTTGAGTTGAAAGCCCCAAACATGAAGAAGAAACTCAATCCAAAAGAAACACAGGAGACAACAACAGCATGCAATTCCAAAAGGGATGTTGGCATGACTATTAAAGATTTTTCACTGGAAAAGAAGTGTTTGCGAATATCTCAAAATGATGGTTGTTTCCTTAAGTTCCTGAACGAAGACCGCCACAAGCTGTCATCATTCTGTGACACAACTGTTACAGTTTCTGGGAGGATATATCATGCACACAAGGTTGTTTTGGCATTTGGAAGTGGATATTTTCATTCCAGATTCAGTGAAAATCCTGAACTCCATCATGTTAGTATTGATAACATGGAGGGCTCCACCTTTGGACACCTGCTCAACTTTTTGTACACTTCTGAATTTGAAGTTTCAGAATGTCAAATCCCTGCTTTGGCTGAAGCTGCCTGTTTTCTTGATATGATGGAAGCTGTAAACATTTTAGCAAAGTGGGCAGCACCAGCTAATGCTGATGAAGAAAGTGAAGTTCCAGAGGAGATCCCAAATTTCCAAAACATCCAAACTTCATCTGGAACCAAGTGTTTATTTTGCAGTCGCACATTCAATTACAAAAAGTCTCTAGAGAATCACTTGGCCAAGACACACAGCACCGGTTGCCATAATGAGGAAGAACAAACTGTGGTGAGCACATCTGTGGTCACAATTCGCAGATCTGCACGTCAGAGGAGGGTACCTGCTAAATTTAAGAGCCAGGATAGTGAAAACGAGTGTGTTGTATCTGCAAAGCCGAACCAAAAAATTGCAAATCACAACTCTGTTACTtatgaggaggaggaagaggataaTGAAAGCAAAGAAGAGAATGAAAACGAGCAGATACAGCAGGAAAGTTGGAAAGAGGGGCAAGAAGAAACATTTGTAGCTTTGGAGGTTGAGGCTGCAGAATATGAAGACTGTGAGAAGCCAAAGGAGGCATGTGTCTCTGAGGCCCAGAAGGAGACTGAACCAGCATTCAGTCATGCTCTTGAGGAGCACAACCAAAAGACAGAGGTCTCTAGTCATATTTTTCCAGAAGGACTGGCTCCTGTTGTGATCCATAGCACTAACAAAAAGAGTCTCAAGTGTCCTAAATGCGACAAGATTTTTGATCGTAAAGGTAAATACGAGAGTCACACCAGAGTACACACGGGAGAAAAACCATTCCAGTGTGACATCTGTCTTCAATGCTACTCCACCAAATCAAACCTCACTGTGCACAAGAAGAAACATGATAGTGGCACACCTGTTCAAAGGAAAGAGCACAAATGTCCCTTCTGCAACAAGCTTCATGCCAGCAAGAAGACTCTAAGCAGACATGTGAAGAGATTTCATCCTGACCACCTGCAGGAGTTTCTCACTCAGAAGAAGAAGAGTGAAGTGTGGAAATGTGATATCTGTCACAAGTCCTTCAGCCGTCGCCCCCACCTGGAGGAGCACATGATCTTACATTCACAGGATAAACCCTTTAAGTGTGCCTACTGTGATGACTACTTTAAGTCACGGTTTGCCAGGCTAAAGCACCAAGAAAAGTTCCATTTAGGACCATTCCCTTGTGACATCTGTGGTCGTCAGTTTAATGACACAGGCAACCGCAAACGTCATATAGAGTGCACACATGGGGGAAAGAGGAAATGGACCTGTTTTCTGTGCGGCAAATCAGTTCGAGAGAGGACAACACTGAGGGAGCATCTAAGGATCCATAGTGGGGAAAAACCTCACCTGTGCAGCATCTGTGGACAAAGTTTTCGTCACGGAAGCTCCTACAGacttCACCTTCGTGTTCATCATGAGGACAAGCGATATGAATGTGAAGAATGTGGAAAAACATTTATTCGCCATGATCATCTAAAGAAGCACAAAAAAATCCATACAGGGGAAAAAGCACACCAGTGTGAAGAGTGTGGAAAATGCTTCCGACGTGCCGATCACTTGACCGTCCATTACAAAAGCATTCACCTGGGAGAAAAGATATGGCAAAGGTATAAAGCAGTAGTGCATCAGTGTCAGGTGTGCAAGAAAGAGTTCAGGGGGAAAACCAACCTCATGTCACACTTCAGAACACATTCAGGT

Function

symbol description
zbtb41 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Orthologous to human ZBTB41 (zinc finger and BTB domain containing 41).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG:

id description
ko03000 Transcription factors
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-130530-649 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Orthologous to human ZBTB41 (zinc finger and BTB domain containing 41).

Ensembl:

ensembl_id ENSDARG00000054984

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030647 False 3176 mRNA 0.43 11 13721888 13800596
TCONS_00030648 True 2345 mRNA 0.43 10 13722116 13788072

Neighbor

gene id symbol gene type direction distance location
XLOC_015282 ebna1bp2 coding upstream 739 13694450 ~ 13721149 (+)
XLOC_015281 cfap57 coding upstream 48394 13462305 ~ 13673494 (+)
XLOC_015280 NA coding upstream 370589 13347400 ~ 13351299 (+)
XLOC_015278 prkag2b coding upstream 573435 13056802 ~ 13148453 (+)
XLOC_015279 BX511000.1 coding upstream 598206 13123566 ~ 13123682 (+)
XLOC_015284 cpdp coding downstream 106856 13907452 ~ 13940917 (+)
XLOC_015285 NA coding downstream 149462 13950058 ~ 13958576 (+)
XLOC_015286 NA coding downstream 160533 13961129 ~ 13962397 (+)
XLOC_015287 NA coding downstream 419432 14220028 ~ 14220637 (+)
XLOC_015288 NA coding downstream 524460 14325056 ~ 14332878 (+)
XLOC_015275 BX908750.1 non-coding upstream 918982 12798366 ~ 12802906 (+)
XLOC_015274 NA non-coding upstream 1084011 12635927 ~ 12637877 (+)
XLOC_015267 BX890600.1 non-coding upstream 2073050 11648163 ~ 11648838 (+)
XLOC_015289 NA non-coding downstream 701462 14502058 ~ 14506622 (+)

Expression


Co-expression Network