XLOC_015348 (glula)


Basic Information

Item Value
gene id XLOC_015348
gene name glula
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 18988407 ~ 18992350 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030731
GTTGGGCAGAGGATGAGAGAACATCAAACACATAATATCCATTAAACTAAGTGGACAATCCACtcctattttatacattttattttctgttggtGTCAAGGTGTTTTATAGTAATAAAAATGGCCACGTCTGCCAGTTCTCAGTTGAGTAAAGTGGTAAAACAGCAGTATATGGAACTGCCTCAGGGAGACCAAGTACAAGCCATGTATATCTGGATAGATGGAACCGGAGAAGGACTACGATGCAAGACCAGAACACTGGACTCTGAACCCAAAAGCATTGAAGATCTTCCTGAGTGGAACTTTGATGGTTCCAGCACGTATCAAGCTGAAGGCTCCAATAGTGACATGTATCTCATCCCAGCTGCTATGTTCAGGGATCCTTTCCGCAAAGACCCCAACAAACTGGTTTTGTGTGAGGTTGTCAAGTACAACCGGAAAACTGCAGAAACCAACCACCGTCATACATGTAAAAAGATCATGGAAATGGTAGGACATCAAAGCCCTTGGTTTGGGATGGAGCAGGAGTACACTATTCTGGGTACTGACGGACACCCCTTTGGTTGGCCTTCCAATGGGTTTCCTGGTCCTCAAGGACCTTACTACTGTGGAGTTGGAGCAGATAAAGCCTATGGCAGAGACATCGTGGAGGCGCATTACAGAGCCTGCCTATATGCCGGTGTGATGATTTGTGGAACCAATGCTGAAGTTATGCCAGCTCAGTGGGAGTTCCAGGTTGGCCCGTGTGAAGGCATTGACATGGGAGATCACTTGTGGGTAGCTCGTTTTATTTTGCACAGAGTTTGTGAAGACTTCGGTGTGGTAGCTTCATTTGATCCTAAGCCGATCCCAGGCAACTGGAATGGTGCTGGTTGCCACACTAACTTCAGCACTAAGGAAATGCGGGAAGATGGTGGACTGAAATGTATTGAGGAGTGTATTGAAAAGCTTGGAAAGAGGCACAACTATCACATCCGCACCTATGATCCAAAAGGAGGCCTGGACAATGCTCGTCGACTCACTGGCCACCATGAAACCTCCAACATTCATGAGTTCTCTGCTGGTGTGGCAAACCGTGGTGCTAGTATCCGCATCCCACGAGCAGTGGGACAAGAGAAGAAGGGCTACTTTGAGGATCGCCGCCCGTCTGCCAACTGCGACCCCTATGCTGTCACTGAGGCCCTGATTCGCACATGTTTGTTAGATGAAGAGGGTGATGAAACTGTGGACTACTAGATCTCCCATTTACTGGACTGAATTTCCCTCCCCTTCTCgccattctattttttttttttttaaggccatCAAGCCAAATTTAGTACTGTATCTTGTTTTCTATAAGGGTGGTTCTAACATGGCATTTTAATATCGTTGAAGTTGACTGGTCAACTTAACATTTTAAGATATAAATCTGAATTTAACCTGATATGACTGGGGACATGGTGTTGCAGGGCATGTCTTTCCCctgttttggtttcatttttccctcattttaatggtttcttgGGGAGGCCATTTCTAATGTTTGCATTGAAAACTCTCTGATTCCATGATTTTACTTTTTTGGTAGTTACGATGGACTGAATAAAGAGTTAAGTGCACAGAAGAACCTAGGACTGCCAAGGCTAGACAACATCTAATTACTTTTGAACCAATAgctagttgttgttgttgtcatgttGACTTGACTTTTCAAGTATGTAATGTTTCGAGATGTCTTACTGACAGTGTATTAAATGGCAAAATTTGGTGtccatttatttttactgtacacACTGTTCATGTTGTGCGGTACAAAGTCGCAGTCCAATAACTGTCCTGTTTTTATACTTGTGGAACTGTTATTTGTCTTGTTAAATCCCTGATTTATCAAGGATTTGATCCTGTTTTTGTCTAATACTATGATGTAACTGCACCTGTTTTGGTAAACCTGAAGATGCTAAAAGgaaactaaaacatttatttttaccacAAA
>TCONS_00030732
GAGAGAACATCAAACACATAATATCCATTAAACTAAGTGGACAATCCACtcctattttatacattttattttctgttggtGTCAAGGTGTTTTATAGTAATAAAAATGGCCACGTCTGCCAGTTCTCAGTTGAGTAAAGTGGTAAAACAGCAGTATATGGAACTGCCTCAGGGAGACCAAGTACAAGCCATGTATATCTGGATAGATGGAACCGGAGAAGGACTACGATGCAAGACCAGAACACTGGACTCTGAACCCAAAAGCATTGAAGATCTTCCTGAGTGGAACTTTGATGGTTCCAGCACGTATCAAGCTGAAGGCTCCAATAGTGACATGTATCTCATCCCAGCTGCTATGTTCAGGGATCCTTTCCGCAAAGACCCCAACAAACTGGTTTTGTGTGAGGTTGTCAAGTACAACCGGAAAACTGCAGGTACATTCGAGAGGGGGTAAAAAGtagagaaaatatataaatattgttcaAAGTTTGTTTAGACTTATTGCTACTCCAATTTTAACCACAGAAACCAACCACCGTCATACATGTAAAAAGATCATGGAAATGGTAGGACATCAAAGCCCTTGGTTTGGGATGGAGCAGGAGTACACTATTCTGGGTACTGACGGACACCCCTTTGGTTGGCCTTCCAATGGGTTTCCTGGTCCTCAAGGACCTTACTACTGTGGAGTTGGAGCAGATAAAGCCTATGGCAGAGACATCGTGGAGGCGCATTACAGAGCCTGCCTATATGCCGGTGTGATGATTTGTGGAACCAATGC
>TCONS_00030733
CCAACCACCGTCATACATGTAAAAAGATCATGGAAATGGTAGGACATCAAAGCCCTTGGTTTGGGATGGAGCAGGAGTACACTATTCTGGGTACTGACGGACACCCCTTTGGTTGGCCTTCCAATGGGTTTCCTGGTCCTCAAGGACCTTACTACTGTGGAGTTGGAGCAGATAAAGCCTATGGCAGAGACATCGTGGAGGCGCATTACAGAGCCTGCCTATATGCCGGTGTGATGATTTGTGGAACCAATGCTGAAGTTATGCCAGCTCAGGTAACCTCTGCCCCAGTCTGCTCTGGAACAAACACCGCAGTCAGCCATTAAGCCATCTAAGATTTGGAATGTGACCTAAATTCTTGAGTTAATTCTTGTCTTACTCTGCAGTGGGAGTTCCAGGTTGGCCCGTGTGAAGGCATTGACATGGGAGATCACTTGT

Function

symbol description
glula Predicted to enable glutamate-ammonia ligase activity. Predicted to be involved in glutamine biosynthetic process. Predicted to act upstream of or within nitrogen compound metabolic process. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; digestive system; hematopoietic system; musculature system; and nervous system. Human ortholog(s) of this gene implicated in Alzheimer's disease; Huntington's disease; and temporal lobe epilepsy. Orthologous to human GLUL (glutamate-ammonia ligase).

GO:

id name namespace
GO:0006807 nitrogen compound metabolic process biological_process
GO:0006542 glutamine biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function
GO:0016874 ligase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-688 Predicted to enable glutamate-ammonia ligase activity. Predicted to be involved in glutamine biosynthetic process. Predicted to act upstream of or within nitrogen compound metabolic process. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; digestive system; hematopoietic system; musculature system; and nervous system. Human ortholog(s) of this gene implicated in Alzheimer's disease; Huntington's disease; and temporal lobe epilepsy. Orthologous to human GLUL (glutamate-ammonia ligase).

Ensembl:

ensembl_id ENSDARG00000099776

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030731 False 1974 mRNA 0.43 7 18988407 18992350
TCONS_00030732 False 780 lncRNA 0.43 4 18988421 18990519
TCONS_00030733 True 435 lncRNA 0.49 2 18990177 18990701

Neighbor

gene id symbol gene type direction distance location
XLOC_015347 CR854990.1 coding upstream 485983 18502308 ~ 18502424 (+)
XLOC_015346 CT737196.1 coding upstream 582290 18405569 ~ 18406117 (+)
XLOC_015345 NA coding upstream 652696 18332763 ~ 18335711 (+)
XLOC_015344 BX511224.1 coding upstream 965642 18017000 ~ 18022765 (+)
XLOC_015343 BX248089.2 coding upstream 1273587 17707492 ~ 17714820 (+)
XLOC_015349 BX323588.2 coding downstream 111881 19104231 ~ 19144467 (+)
XLOC_015350 elovl1a coding downstream 171615 19163965 ~ 19215112 (+)
XLOC_015351 cc2d1b coding downstream 244327 19236677 ~ 19274665 (+)
XLOC_015352 pimr141 coding downstream 512913 19505263 ~ 19508136 (+)
XLOC_015353 BX664750.4 coding downstream 526735 19519085 ~ 19519182 (+)
XLOC_015342 BX248089.1 non-coding upstream 1330331 17657958 ~ 17658076 (+)
XLOC_015356 BX664750.6 non-coding downstream 582709 19575059 ~ 19575156 (+)
XLOC_015358 NA non-coding downstream 597694 19590044 ~ 19595194 (+)
XLOC_015359 NA non-coding downstream 622603 19614953 ~ 19616789 (+)
XLOC_015360 BX088713.3 non-coding downstream 636347 19628697 ~ 19628794 (+)

Expression


Co-expression Network