XLOC_015363


Basic Information

Item Value
gene id XLOC_015363
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 19659710 ~ 19679329 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033515
GCAGAGGGCGCTGTTGTGCTGTCGTGAGCGCGCACATCTCGTGCTTGATTCGACTCACGGATTTCTCGACATAACAAGCATTTGACATGGTGACAGACAGCTGGATTATATTTAACACTCCTGAAGTTCAAGCGTAATAAAATTACCGACGAgcgtttaaagagatagttcactcttAAATGGAAATTTGCTGTAAATGAACTCTCCCACAGGCCGTCCAAAATGACGTCTTCTCTTCATTCAAGAAGATAGCATGGCGATCTTGCACCAGAATTGAAACAACTAAGAAGTAAATGGAGGAAGGCCTCAGGGGCAGGAGGAAGCAATGAAGACCTGGAATCCAGCTAGGACAGCAGCCCACGGTGGAGTTGATGGGATGAGGAGCCATGATTTAGATGGGAATGTCAACACCAGGGTGCTGAACAATAGCGACAGAGGGGATGGAAGTAGAGCCTAAGGGCTGGGACACGCCGTGCCAATGCCAAACAACTAGCaccaacaaaacacaattttgttTCATTGGATTGCAGCTGGGCCAAAAAACTGCACTTGAACACACCAAACTGACACAAAGAGCCGCATTATATGCCTGCGCAAGTAGGTGTGAATTTCTGCTGGGGCTAGTGATCTGTTTTATTGTTCCACATAAGAAAACCAAACTTCCGACTCACACAGAGAAAATGTAAAGAAAGCAGAATTTAGTACCATTATGACAGTAATTATTACCACAGAGGGATTCACTTAtgaaaatatgtctgataatccaTATCGTTTGCAAATATATAAGAAATGTAGTAAAATTATGGTTGGCCTCTTTGTGTTCCCTTTTGGCTTCACTTCACAACATCACACTCGCACTCTGATTTGTTGCTGAATAACCAGTTAGAGTGCTCTGTTCAGCTGACGAATCGAAGCCAATTCAATGCTAAATTGGGCCAACAAATTTCGATGTTAACCTATTTAGAGGTAACATAGGGAACACACCAAAACAGCTAGCCTAAACGATGGACCAACAAAGTAAAATGGCTGACCCCAAGACTGAGATAAAGAGCTGCAGAACCAGAGTGATGCCTATAGGATTCAAATGCCCATGGCAGAGCTGATGGCTCGAGTCACCATCACATAAGAAGGGTTCTGGTAGACCACAGTGGAGCTGGTGTGACTAAGGTAGAGCCGAAGGGAAGGAGGAGCCCAAAGAAGACAGAGGGGAAAAGTGTAGCCAGAGGAATGTTGTCTGAAGGGGAAGGTATGAGGATGATTGACCAAGGTGCAGACAGAAAGATGAGGACGATGAGGTGGGACAAAAGGGCACAGTTGAGACAAAGGACAATAGAGCCAAGGTGGAAACAATGGGTTGAAGGGCTGAGGAGATCTTTGCAGCTTAGAAACTGAAGGCAGACATCTGCCAACACAGAAGAGCTGGTACCTGGAAGACACATGGTGAGCTGAGGGACTGGCCTTAGTCTGGAGAGAATTCTGGAGAAGGTTTTTGGGCAGGGACACAAACTGTTCAGGGAGTTCAGTCACCAGAATGGTATAATCAGTTCCAGATTCAAACTGTTTTTTTGGTTTAGGAGTATCAAACAGTTAAACCAGTTTCACAGAGTCAAAAATAGTAAAACAGATTTCAAATAGGTTAATTAGTTGCAGAGAATAAAACAGTTCTTTCAGTTCAGAAGATTCAAACAGTTAGATTTATTCAGGGGTTTCAAACAGTTCAATCAATTCATTTCTCAGACCAGAGGCAGCACCTAACCACTGTGCCACAATACACAGCCTTTTGGAGAACACTCCATGTGATAGCATGCACTCaacaataaaacac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033515 True 1825 lncRNA 0.44 2 19659710 19679329

Neighbor

gene id symbol gene type direction distance location
XLOC_015362 NA coding upstream 10369 19640952 ~ 19649341 (+)
XLOC_015361 pimr54 coding upstream 24056 19633493 ~ 19635654 (+)
XLOC_015360 BX088713.3 coding upstream 30916 19628697 ~ 19628794 (+)
XLOC_015359 NA coding upstream 42921 19614953 ~ 19616789 (+)
XLOC_015358 NA coding upstream 64516 19590044 ~ 19595194 (+)
XLOC_015364 ptbp2b coding downstream 97817 19777146 ~ 19795593 (+)
XLOC_015365 plppr4a coding downstream 652116 20331445 ~ 20371803 (+)
XLOC_015366 palmda coding downstream 727070 20406399 ~ 20428140 (+)
XLOC_015367 si:ch211-153l6.6 coding downstream 751037 20430366 ~ 20443258 (+)
XLOC_015368 NA coding downstream 792821 20472150 ~ 20526830 (+)
XLOC_015356 BX664750.6 non-coding upstream 84554 19575059 ~ 19575156 (+)
XLOC_015371 AL954134.2 non-coding downstream 952892 20632221 ~ 20633527 (+)
XLOC_015372 rxrga non-coding downstream 1046355 20725684 ~ 20776841 (+)
XLOC_015384 dre-mir-26a-2 non-coding downstream 1696138 21375467 ~ 21375594 (+)
XLOC_015385 NA non-coding downstream 1752396 21431725 ~ 21436401 (+)

Expression


Co-expression Network