XLOC_015396 (pkn2)


Basic Information

Item Value
gene id XLOC_015396
gene name pkn2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22416275 ~ 22477141 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030821
caaataagtaaacaaatgagtaaataacAGTAAGGACTTATGTGGATAAGGTATTAAACTACTGAATAACTTTTTTTATGTAATCAAAGTAAATTCAggtaatatagattttttttgcttttcattgCTAACCCAATTTCTCAGCCCATTTTGTGGTACCCAATCTGTAATATTTTTTACAAGAAACCTTAAAGACCCCCTTTCATATTTTAGCCTGGGGCTCCCTGAAAGGAGGACGATCACATTTGTGGGGTTCCTCTTGGCATCTAAAATAATAAACCTCTCTGATTTAGattactataattaaataaatctaacCAATCCTACAATGTGTCATTAAGGAAAAACTTGCTTAATGTACACAAACAATGATGTCATAGAATTTGTTACTGCTATAAAATTAATttgcattacaaaaaaattatatatatttcacttatatttataaatatcgcCAGTAAAATATACTCGTGTTGCCCTTCTAGAATGAGTGTGTTGTGTTGAAGCTTCAGTGTTTGTGGATCTGTTATTGATCACATGATCGAGGCTGGACTGGCCGCGGCTGAACTGGGTGCGGGAACAGAAACCTGCACTTGGGTCGATGTGCCTCCCCTTGTTTAGATGTTAGCAGCGCGGCTCTGCGTTCCCCCCAAACGCGCTGATCTCTGCTATCAGCCCGGGTCTTTTACCCCCGCATTTACAACAAACCCCCAGCTCAGCCATGGGCCCCCCTCCGTCTCCTGGCCACGTTATGGATCGCACCCCAAATAAAGCGCTCGTCGCTTGAGACGGAAACATAACAGGCTTGTTTTTTGGGAGTGACTCACCTCCCCTTCCCCAGAGTTTGATTCAAAAAGAGTTCAGAACCAAGATGGCCGCCGATCCCATGCAGGCTGGCATGGTTTCGGAGCAACTGGGCCTGGGGCACAACCTTGACCTGTCTGACACCATGGTGCAACAGAAGCTAGATGAAATCAAGGAGCAGATCAAGAGGGAAATCCGCAAAGAGCTGAAGATCAAAGAGGGAGTGGAAAACCTTAGAAAGGTCACCACAGAAAAAAAGAGACTGGCATATGTTGATAATATGCTTAAGAAGTCCAACAAGAAGCTCGAGGAGCTGCATCAAGAGCTGCAAGAGCTCAACGCTCATATTGTGGTGAAGGATCCAGAGGATCTTCTCTTGGagTGCCCACTTACGCTGGACAGCCCTAAAAGTGAATCACGTACATGCACTAGCAGCAGTAGACTAGCAGCCCTGAAGAAACAGAACGACATTGAGCTGAAGGTGAAGCAGGGGGCCGAGAACATGATCCAGATGTATTCAAATGGCTCCTCGAAGGACAGAAAACTTCTTGCGACGGCACAGCAAATGCTTCAAGACAGCAAAACCAAGATCGAGTTCATCCGAATGCAGATCCTCAAAGCCAGCCAGACCAGCGAGCTCAGTTTTGACAACAATGATGTCATCGCCAAACCCATCATCAGTCCGCTGGACCTGCGGGTGGAGGAGCTCTGCCATCACACACGCATAGAGTTCGCTGTAGCCGAAGGAGCCAAGAACGTCATGAAGCTGCTGGGCTCCGGCAAACTGGCAGAGAAGAGGGCTCATTCAGAGGCCCAAGCCAGATTCAATGAGTCCAGTCAGAAGCTGGATTTGTTGAAGTATTCCCTGGAGCAGAGACTCAATGAGCTTCCCAAGAACCACCCGAAGTGCAGTTTGATCATGGAGGAGCTATCTCTGATGTCCTCTCCGGCTCTCAGTCCTCGCCAGAGCTTCATATCCACCCAAAACCACAACAGCACTGTGAAGAACCAGTACAGCACCAAACCAGCAGCTCTCACAGGTAAGCTGGAGGTTCGGCTCATGGGATGTCAGGATTTGTTAGAGAGTGTGCCTGGCCGCTCTAAAGCCACGTCGGTACCGCTGCCCGGTTGGAGCCCCAGTGAAACTCGCTCATCTTTCATGAGCCGTGGAAACCGCAGAGGAACCAGCGTTCGAAACCTCTCTAAAAATGACGACTTGTCCAATGAGATTAGTGCTGTTCTGAAGCTTGACAACACTGTAGTGGGTCAAACCAGCTGGAAACCTGTCAGTAACCAGTCATGGGACCAGAAGTTTACATTGGAGCTTGATCGGTCTCGTGAGCTGGAGATCTCTGTGTATTGGAGGGACTGGCGGTCTCTTTGTGCAGTCAAATTCCTGCGACTCGAGGACTTCCTGGACAACCAGCGGCACGGAATGTGCCTTTACCTTGAGCCACAAGGGACTCTGTTTGCAGAGGTGACTTTTTTTAATCCAGTCATTGAGCGACGAACTAAACTCCAAAGGCagaagaagattttttcaaagcAACAAGGGAGGACGTTCTTGCGGGCCCCTCAGATGAGCATAGGGACATGGGGCCGACTGGTGAGGAGGGCCATTCCTTCCCCCAATAACTCTTTCAGTCCTCTGGCGGCAGAGACTGGACACAGCAGTCACCCTGGAACCCCTGCACTGAGGAGTGACCCAATAGTGACAAAACTGGACTTTGACAGAGACACTACACCAAAGAATTACTCTCCTGTTAGTGTGCGAGAAGTCCTGCCCGAGGACAAGATCTCCAACAAAGAGCGAGAGAGGGGCGCTTTGACTGCGTTTGCCTACCGAAATGACAGGAATAGCATCATTGTACAGTCTGGCCTTGAAGAAATAGTTGAACATGACACTCCACCTTCAGCATTACAGCTCATAAATGTCCAGAAAAGCACAGAAATAAGGGAtgaagaagaacagtttcattTCAGTCTTAAagactttaaatgtgttgcaGTATTAGGCCGCGGTCATTTCGGAAAGGTGTTACTAGCAGAATACACTATTACTGGTGAAATGTTTGCCATCAAGGCTCTTAAAAAGGGAGATATTGTAGCCCGTGATGAGGTTGAaagttTGATGTGTGAGAAGAGGATATTTGAGACTGTGAACAGCGTTCGGCACCCGTTCCTGGTCAATCTATTTGCATGTTTCCAGACTAAGGATCATGTGTGTTTTGTGATGGAGTATGCGGCAGGAGGGGACCTTATGATGCACATACACGCGGACGTGTTTTCAGAGCCACGGGCCACGTTTTATGCAGCTTGTGTCGTTCTGGGCTTGCAGTTTTTACATGAGCATAAGATTGTATACAGGGATCTGAAGTTGGATAACTTACTGCTTGACACTGAGGGATTTGTCAAGATTGCTGACTTCGGTCTTTGCAAAGAAGGAATGGGTTATCGGGACAGAACCAGCACTTTTTGCGGCACTCCAGAGTTTCTGGCACCTGAGGTGTTAACTGAAACATCCTATACACGAGCTGTGGACTGGTGGGGCCTCGGCGTACTCATTTTTGAGATGCTTGTCGGAGAGTCTCCATTTCCTGGTGATGATGAAGAAGAGGTGTTTGACAGCATTGTGAATGACGAGGTTCGCTACCCACGAGTCCTCTCAACAGAAGCCATCTCCATCATGAGAAGGTTGTTAAGAAGGAATCCAGAGAGACGGCTTGGAGCTGCTGAACGAGATGCAGAAGATGTGAAGAAACATCTGTTCTTCAGAGTAAGTTCAGAAGAAACATCTGGCTGCATCTTTTCAGTTATTCCAATCTCTGTTTCCGCCTCTCACTCTCTGAATAAAACATCATTCCTACCTTATGTCTTCCAGGATATTGACTGGGACGGATTATTAGCAAAGAAAGTAAAGCCACCATTTGTACCCACGATTCAATGCTCCAGTGACGTTAGTAACTTTGATGATGAATTTACCTCAGAGGCTCCAGTGCTGACGCCACCCAGAGAACCGCGGCCATTAAACCAGCACGAGCAGGACCTGTTCACTGACTTTGACTACATCGCAGACTGGTGTTAG
>TCONS_00030820
caaataagtaaacaaatgagtaaataacAGTAAGGACTTATGTGGATAAGGTATTAAACTACTGAATAACTTTTTTTATGTAATCAAAGTAAATTCAggtaatatagattttttttgcttttcattgCTAACCCAATTTCTCAGCCCATTTTGTGGTACCCAATCTGTAATATTTTTTACAAGAAACCTTAAAGACCCCCTTTCATATTTTAGCCTGGGGCTCCCTGAAAGGAGGACGATCACATTTGTGGGGTTCCTCTTGGCATCTAAAATAATAAACCTCTCTGATTTAGattactataattaaataaatctaacCAATCCTACAATGTGTCATTAAGGAAAAACTTGCTTAATGTACACAAACAATGATGTCATAGAATTTGTTACTGCTATAAAATTAATttgcattacaaaaaaattatatatatttcacttatatttataaatatcgcCAGTAAAATATACTCGTGTTGCCCTTCTAGAATGAGTGTGTTGTGTTGAAGCTTCAGTGTTTGTGGATCTGTTATTGATCACATGATCGAGGCTGGACTGGCCGCGGCTGAACTGGGTGCGGGAACAGAAACCTGCACTTGGGTCGATGTGCCTCCCCTTGTTTAGATGTTAGCAGCGCGGCTCTGCGTTCCCCCCAAACGCGCTGATCTCTGCTATCAGCCCGGGTCTTTTACCCCCGCATTTACAACAAACCCCCAGCTCAGCCATGGGCCCCCCTCCGTCTCCTGGCCACGTTATGGATCGCACCCCAAATAAAGCGCTCGTCGCTTGAGACGGAAACATAACAGGCTTGTTTTTTGGGAGTGACTCACCTCCCCTTCCCCAGAGTTTGATTCAAAAAGAGTTCAGAACCAAGATGGCCGCCGATCCCATGCAGGCTGGCATGGTTTCGGAGCAACTGGGCCTGGGGCACAACCTTGACCTGTCTGACACCATGGTGCAACAGAAGCTAGATGAAATCAAGGAGCAGATCAAGAGGGAAATCCGCAAAGAGCTGAAGATCAAAGAGGGAGTGGAAAACCTTAGAAAGGTCACCACAGAAAAAAAGAGACTGGCATATGTTGATAATATGCTTAAGAAGTCCAACAAGAAGCTCGAGGAGCTGCATCAAGAGCTGCAAGAGCTCAACGCTCATATTGTGGTGAAGGATCCAGAGGATCTTCTCTTGGagTGCCCACTTACGCTGGACAGCCCTAAAAGTGAATCACGTACATGCACTAGCAGCAGTAGACTAGCAGCCCTGAAGAAACAGAACGACATTGAGCTGAAGGTGAAGCAGGGGGCCGAGAACATGATCCAGATGTATTCAAATGGCTCCTCGAAGGACAGAAAACTTCTTGCGACGGCACAGCAAATGCTTCAAGACAGCAAAACCAAGATCGAGTTCATCCGAATGCAGATCCTCAAAGCCAGCCAGACCAGCGAGCTCAGTTTTGACAACAATGATGTCATCGCCAAACCCATCATCAGTCCGCTGGACCTGCGGGTGGAGGAGCTCTGCCATCACACACGCATAGAGTTCGCTGTAGCCGAAGGAGCCAAGAACGTCATGAAGCTGCTGGGCTCCGGCAAACTGGCAGAGAAGAGGGCTCATTCAGAGGCCCAAGCCAGATTCAATGAGTCCAGTCAGAAGCTGGATTTGTTGAAGTATTCCCTGGAGCAGAGACTCAATGAGCTTCCCAAGAACCACCCGAAGTGCAGTTTGATCATGGAGGAGCTATCTCTGATGTCCTCTCCGGCTCTCAGTCCTCGCCAGAGCTTCATATCCACCCAAAACCACAACAGCACTGTGAAGAACCAGTACAGCACCAAACCAGCAGCTCTCACAGGTAAGCTGGAGGTTCGGCTCATGGGATGTCAGGATTTGTTAGAGAGTGTGCCTGGCCGCTCTAAAGCCACGTCGGTACCGCTGCCCGGTTGGAGCCCCAGTGAAACTCGCTCATCTTTCATGAGCCGTGGAAACCGCAGAGGAACCAGCGTTCGAAACCTCTCTAAAAATGACGACTTGTCCAATGAGATTAGTGCTGTTCTGAAGCTTGACAACACTGTAGTGGGTCAAACCAGCTGGAAACCTGTCAGTAACCAGTCATGGGACCAGAAGTTTACATTGGAGCTTGATCGGTCTCGTGAGCTGGAGATCTCTGTGTATTGGAGGGACTGGCGGTCTCTTTGTGCAGTCAAATTCCTGCGACTCGAGGACTTCCTGGACAACCAGCGGCACGGAATGTGCCTTTACCTTGAGCCACAAGGGACTCTGTTTGCAGAGGTGACTTTTTTTAATCCAGTCATTGAGCGACGAACTAAACTCCAAAGGCagaagaagattttttcaaagcAACAAGGGAGGACGTTCTTGCGGGCCCCTCAGATGAGCATAGGGACATGGGGCCGACTGGTGAGGAGGGCCATTCCTTCCCCCAATAACTCTTTCAGTCCTCTGGCGGCAGAGACTGGACACAGCAGTCACCCTGGAACCCCTGCACTGAGGAGTGACCCAATAGTGACAAAACTGGACTTTGACAGAGACACTACACCAAAGAATTACTCTCCTGTTAGTGTGCGAGAAGTCCTGCCCGAGGACAAGATCTCCAACAAAGAGCGAGAGAGGGGCGCTTTGACTGCGTTTGCCTACCGAAATGACAGGAATAGCATCATTGTACAGTCTGGCCTTGAAGAAATAGTTGAACATGACACTCCACCTTCAGCATTACAGCTCATAAATGTCCAGAAAAGCACAGAAATAAGGGAtgaagaagaacagtttcattTCAGTCTTAAagactttaaatgtgttgcaGTATTAGGCCGCGGTCATTTCGGAAAGGTGTTACTAGCAGAATACACTATTACTGGTGAAATGTTTGCCATCAAGGCTCTTAAAAAGGGAGATATTGTAGCCCGTGATGAGGTTGAaagttTGATGTGTGAGAAGAGGATATTTGAGACTGTGAACAGCGTTCGGCACCCGTTCCTGGTCAATCTATTTGCATGTTTCCAGACTAAGGATCATGTGTGTTTTGTGATGGAGTATGCGGCAGGAGGGGACCTTATGATGCACATACACGCGGACGTGTTTTCAGAGCCACGGGCCACGTTTTATGCAGCTTGTGTCGTTCTGGGCTTGCAGTTTTTACATGAGCATAAGATTGTATACAGGGATCTGAAGTTGGATAACTTACTGCTTGACACTGAGGGATTTGTCAAGATTGCTGACTTCGGTCTTTGCAAAGAAGGAATGGGTTATCGGGACAGAACCAGCACTTTTTGCGGCACTCCAGAGTTTCTGGCACCTGAGGTGTTAACTGAAACATCCTATACACGAGCTGTGGACTGGTGGGGCCTCGGCGTACTCATTTTTGAGATGCTTGTCGGAGAGTCTCCATTTCCTGGTGATGATGAAGAAGAGGTGTTTGACAGCATTGTGAATGACGAGGTTCGCTACCCACGAGTCCTCTCAACAGAAGCCATCTCCATCATGAGAAGGTTGTTAAGAAGGAATCCAGAGAGACGGCTTGGAGCTGCTGAACGAGATGCAGAAGATGTGAAGAAACATCTGTTCTTCAGAGATATTGACTGGGACGGATTATTAGCAAAGAAAGTAAAGCCACCATTTGTACCCACGATTCAATGCTCCAGTGACGTTAGTAACTTTGATGATGAATTTACCTCAGAGGCTCCAGTGCTGACGCCACCCAGAGAACCGCGGCCATTAAACCAGCACGAGCAGGACCTGTTCACTGACTTTGACTACATCGCAGACTGGTGTTAG

Function

symbol description
pkn2 Enables RNA polymerase binding activity; histone deacetylase binding activity; and protein serine/threonine kinase activity. Involved in several processes, including apical junction assembly; positive regulation of cell cycle; and positive regulation of viral genome replication. Located in several cellular components, including cleavage furrow; cytoskeleton; and midbody.

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0007507 heart development biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0048703 embryonic viscerocranium morphogenesis biological_process
GO:0007165 signal transduction biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
ko04151 PI3K-Akt signaling pathway
ko04621 NOD-like receptor signaling pathway
ko05135 Yersinia infection
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-061207-42 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within embryonic viscerocranium morphogenesis and heart development. Predicted to be located in several cellular components, including cleavage furrow; midbody; and nucleus. Orthologous to human PKN2 (protein kinase N2).

Ensembl:

ensembl_id ENSDARG00000101983

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030821 False 3889 mRNA 0.47 21 22416275 22477141
TCONS_00030820 True 3784 mRNA 0.47 22 22416275 22477141

Neighbor

gene id symbol gene type direction distance location
XLOC_015395 zgc:56628 coding upstream 1079 22409249 ~ 22415196 (+)
XLOC_015394 hs2st1a coding upstream 17485 22363824 ~ 22398790 (+)
XLOC_015393 tox coding upstream 308167 21982911 ~ 22108108 (+)
XLOC_015392 CT956055.1 coding upstream 444866 21882881 ~ 21971409 (+)
XLOC_015391 ca8 coding upstream 537748 21855036 ~ 21878527 (+)
XLOC_015397 lrrc8da coding downstream 18133 22495274 ~ 22502251 (+)
XLOC_015398 hfm1 coding downstream 54044 22531185 ~ 22552063 (+)
XLOC_015399 sept2 coding downstream 114998 22592139 ~ 22615366 (+)
XLOC_015400 bokb coding downstream 163074 22640215 ~ 22650435 (+)
XLOC_015401 zgc:161973 coding downstream 182646 22659787 ~ 22677019 (+)
XLOC_015388 NA non-coding upstream 879003 21534038 ~ 21537272 (+)
XLOC_015385 NA non-coding upstream 979874 21431725 ~ 21436401 (+)
XLOC_015384 dre-mir-26a-2 non-coding upstream 1040681 21375467 ~ 21375594 (+)
XLOC_015372 rxrga non-coding upstream 1639434 20725684 ~ 20776841 (+)
XLOC_015407 NA non-coding downstream 434051 22911192 ~ 22916384 (+)
XLOC_015408 NA non-coding downstream 507989 22985130 ~ 22992029 (+)
XLOC_015410 NA non-coding downstream 548180 23025321 ~ 23026978 (+)
XLOC_015414 NA non-coding downstream 678871 23156012 ~ 23184804 (+)
XLOC_015416 BX548024.3 non-coding downstream 780636 23257777 ~ 23257897 (+)

Expression


Co-expression Network