XLOC_015415 (kifap3b)


Basic Information

Item Value
gene id XLOC_015415
gene name kifap3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23222939 ~ 23293501 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030854
GGATCAGGGAGAGCCTAGCGGATGAGAGATGCTTTGATTCTTATTCATGACAACAATTTGAAGATCAGCCAAAAATATATCTCGCTCCTTCACATGACCGGGATAAAATGCAGCCGGACGAGACGCAGTATTTACAACGGAGATGTAGGATTGGTGATATAGATGTGCACCCCACAGAGAAGGCTCTAGTTGTGTATTATGAAGTGGAAGCATCTATTTTAGGGGAAACGGGCAATGCAAGGCATGAGGAGAAGAAGGACTGCCAGAAAATcatcCGGCTGAGGAGTCTGAACGCCAGCACTGATATTTCCGCCCTGGCCAAGAAGGTGGTGGAAGAGTGTAAACTCATTCATCCATCTAAGCTGAAAGAGGTGGAACATCTGCTGCTGTATTTACAGAACCGAAAGAAGCCCAGCACTAAATTGGAGAAGAAGGAGAAGAAAGCTCAGAAACCCAGAGAACTCCTGCTGTTTGAAGGAATGGAAATTGATGAGGaggcaaatattaataaaattgaaGAGTACATAGAGCTGTTGTATGAAAGCATCCCTGAGAAGATCAGAGGCTCAACTCTCATCCTACATTTGGCACGTAACCCTGATAACCTGGAGGAGCTCCTGCATAACGaaactgcactTGGAGCTCTGGCTCGCGTACTGAGAGAGGACTGGAAACACAGTGTGGAGTTAGCAACTACCATCATCTATGTATTTTTCTGCTTCTCAAGTTTTTCTCAATTCCATGGGCTCATTACACATTATAAGATCGGAGCGCTGTGTATGAACGTCATCGAACATGAGCTGAAGAAATATGACCTGTGGCAGGACGAGTTGGAGAAGAAGAGCAAAGCTTGTGATGAAGACCCCGACAACCATAGTTTGAGGAAGGAGCATGAGAAAACCTTCAAGAAATACCAAAGCCTGCTGGTCAAACAGGAGCAGCTGCTGCGAGTTGCGTTCTACTTGCTGTTAAACCTGTCTGAGGACACTCGCACCGAGCTCAAGATGAGGAACAAGAACATTGTGCACTTGCTAGTCAAGTCTTTAGACCGGGAGAATGAGGAGCTGCTGGTGCTGGTGGTCTCCTTCCTCAAAAAACTCAGCATCTTCTTGGAGAACAAGAATGATATGgCTGAGATGGACGTCGTGGAGAAACTGGCTCATCTGGTTCCATGTGAACATGAAGACCTGATGAATGTGACTCTGCGGCTTCTCCACAACCTCTCCTTTGATACGGGGCTGCGAACTAAGATGGTGCATGTGGGACTGCTGCCCAAACTCACGGCTCTGCTCGgtgaCGACACACACAAGCTTGTAGTGATGCGCATCCTTTACCACATCAGTGTGGATGACAAATCCAAATCCATGTTTGCGTACACTGACTGCATTCCTCAGCTCATGCAGATGCTGTTTGAACATGGTGAAGAGAGAATCGACACTGAGCTCATCTCCTTCTGCATCAACCTGGCTGCTAACAAGACCAACTCTCAGATTATGTGTGAAGGCAATGGACTGAAAATGCTAATGAGAAGAGCACTTAAACTAAAGGACCCACTGCTAATGAAAATGATTAGGAACATCTCACAACACGATGGACCTCTGAAACAGCTGTTCATTGACTATGTGGGTGATCTGGCAGCTCAGATCAAGAAAGAGGGGGATGAGGAGTTTGTTATTGAGTGTTTGGGCACAATGGCAAACCTCACCATACCTGACCTGGACTGGGAGCTTCTACTGAAAGAATACAACCTGGTGCCCTTCCTTAAAGACCACCTCAAACCAGgcTCAGCAGAGGATGATATGATCCTGGAGGTGGTTATCATGATCGGTACGGTTTCAATGGACGACTCCTGTGCCGTCATGCTGGCGAAATCCGGAATCATTCCTGCTCTTATTGAACTACTCAACGCCCAGCAGGAGGACGATGAGTTTGTGTGTCAGATCATCTACGTCTTCTACCAGATGGTCTTCCACCAGGCCACCAGAGATGTCATCATTAAGGACACTCAAGCCCCAGCCTACCTCATCGACCTAATGCACGACAAAAATGTGGAGATCCGGCAGGTGTGTGACAACACTCTGGACATTATTGCTGAGTACGATGAGGAATGGGGGAAGAAGATCCAAAGCGAGAAGTTTCGCTGGCATAACTCGCAGTGGTTGGAGATGGTGGAGAGCAGACAGATGGAGGACGGCGAGCCCTACATGTATGGAGATGACCCGGAGGCTCTCGAACAGCCCGATCTCTTCTACAGCACTGatGGTATGATGAATCCGGAGCCAGGCATCAGTCCAGACTTCTACAGCCAGTTTCACCCTCAGAATGGAGACTTCAACGCCTGTAACGGATCAGATGGACGTCCTGCCACAGCCTATGGCTTTCGTCCGGACGAGCCCTTCTTCCATGGCTACGGCTCTACCAGATAAAGCTGCTCCGTAACACCATCTACATGTTCACTACAGCAACACTCAAATACTTCAAACCAACCAGTTCATTCAACAAACCCTTAGATTCAAAGAGACACCAGGAAAATGCTTAGTGATGCTATTAAGAGATGATCTATAGggacttttttctgttgaacacgaaagaagatattctaaagaatgttttaaaaaatgctactGATATCCATAGTAGAAAtaaatactacggaagtcaatggctaACAACTCTGTAGTTTTCTAAatgaatatcttctttttgtgttcaccAGTCAAAGGAAAACAAACAGGTTTGGGACGAGtggaaaatgagtaaatgatgacatgatGATCATATTTTCTGGGGTTATTGGTGGGTGAACTAattctttaataattttaatgtatattattaagcAGATTGGTGGTctaagtacatttaaatatgaatgtATAGATCTGTTTATCTGATCGTTCATGAATAAAATCAATACTTAGTTGTAAGGTGTTGATATTATTTATGAAAGTTCAGATATAGTGCTGTAGTCTTAGATCTGAGCGACACATACAGGGTAAAGTTGAATGAAAGTATCTGAGCTAAATATGATTACAGTTACATCTGACCTTCAGAATagtcttcatttatttatgttttgcttaacattttatgttaatttgtttttatatttcaggAAGTTCACTTTAACACTATATTCACTGAACTGGAATAGATTTGTTCAAATCTTCATAATCACTAAATATTAGTCATCCAAAATGCTGTTAATTGATCTTTTGCAAATTATAAACTATATGTAATAACctcatacatacatttatatcaACAGCTTCATGAAAACGTAGCATTACTCACTCTATGGAAAATAATACCTTGCactattcaaataatatttagcAGAAATACTTAGTGTGTTTGTCGAATAGCACATAATACATCTCTGACATATTTATGAATGAACTACCTAACAATGTGCAGGATTCATTGCTGTGAAACTCCTCTAGTTGTATAATCCTATAATAAGGTGCTAAATGTTGCCtctggttgttgttttttatgtcatTGTTTTTACTTGAGATGTAGCACGCGTCCGtcttattttacagtactgtaatgcTGTTTTAAGTTATGACAATGAATTCAGGATTCGATCGCTCTGTGATTCCAGACCCAAATCGTGCCTCCTGACATCTCGGCCTTTGCTGCTAGAATGATCCTGTGAGTTTAACAGACTAATGTGAATCGACTGTCCTTTACTGCAAATGGAAGAAATAAAGACCATGCACTGAT
>TCONS_00030856
CAGAGATCTGTTTCTCTATGGCACCATCAGCCTAGAGGGAAAACCCTGCTCAGACAGAAGCCCTCATTGTGGCATGAAATATATCTGCCGTGCAGGGTCCGGACGGAGTTTGAAGTCGGTAACGGTGGATGGTAGATTGCCAGGCGTGACAGCGTATGAGACCCTCAGATATTCTGTTGCGGGGAGTTGGCGCTGAGATTCGGAGTGCCAGCGATGTTTTGACagctttaaaatGAGTACGATGAGGAATGGGGGAAGAAGATCCAAAGCGAGAAGTTTCGCTGGCATAACTCGCAGTGGTTGGAGATGGTGGAGAGCAGACAGATGGAGGACGGCGAGCCCTACATGTATGGAGATGACCCGGAGGCTC

Function

symbol description
kifap3b Predicted to enable kinesin binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to be part of kinesin II complex. Predicted to be active in axoneme and ciliary transition zone. Orthologous to human KIFAP3 (kinesin associated protein 3).

GO:

id name namespace
GO:0044782 cilium organization biological_process
GO:0007018 microtubule-based movement biological_process
GO:0035869 ciliary transition zone cellular_component
GO:0005871 kinesin complex cellular_component
GO:0005930 axoneme cellular_component
GO:0016939 kinesin II complex cellular_component
GO:0019894 kinesin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2219 Predicted to enable kinesin binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to be part of kinesin II complex. Predicted to be active in axoneme and ciliary transition zone. Orthologous to human KIFAP3 (kinesin associated protein 3).

Ensembl:

ensembl_id ENSDARG00000006862

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030854 False 3729 mRNA 0.43 20 23222939 23293501
TCONS_00030856 True 370 processed_transcript 0.53 2 23274332 23274781

Neighbor

gene id symbol gene type direction distance location
XLOC_015414 NA coding upstream 38135 23156012 ~ 23184804 (+)
XLOC_015413 si:dkey-218h11.6 coding upstream 90805 23130389 ~ 23132134 (+)
XLOC_015412 mfsd12a coding upstream 119790 23081247 ~ 23103149 (+)
XLOC_015411 csnk1g2a coding upstream 144191 23039041 ~ 23078748 (+)
XLOC_015410 NA coding upstream 195961 23025321 ~ 23026978 (+)
XLOC_015417 rnf2 coding downstream 57953 23351454 ~ 23361933 (+)
XLOC_015418 NA coding downstream 112952 23406453 ~ 23479246 (+)
XLOC_015419 NA coding downstream 121382 23414883 ~ 23421047 (+)
XLOC_015420 NA coding downstream 157271 23450772 ~ 23451401 (+)
XLOC_015421 BX470197.1 coding downstream 189297 23482798 ~ 23484348 (+)
XLOC_015408 NA non-coding upstream 230910 22985130 ~ 22992029 (+)
XLOC_015407 NA non-coding upstream 306555 22911192 ~ 22916384 (+)
XLOC_015392 CT956055.1 non-coding upstream 1251530 21882881 ~ 21971409 (+)
XLOC_015422 NA non-coding downstream 248226 23541727 ~ 23609276 (+)
XLOC_015423 NA non-coding downstream 256685 23550186 ~ 23557515 (+)

Expression


Co-expression Network