XLOC_015497 (buc)


Basic Information

Item Value
gene id XLOC_015497
gene name buc
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 27855102 ~ 27859558 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030994
TGCATTAATGTGGATCTCTGGAAACAGACGAAACCTATAAATCTAAAGTGCAAAGCTGTAGCTAACAGAGTTAGTCGCTCTCGCTCTATATTACACATTTAAGTCCACTTTGTCACTTTCACATCTAAGTATTGCGGTGTTTTGTATCCTGTGCTGATTTTCTTCGTCTCCTCGTAGGAAATGGAAGGAATAAATAACAATTCACAACCAATGGGAGTTGGGCAACCTCACCACCCAGTAAACCACACAAGACCATTTTTCTATGTTCAGCCACCATCTCAGCCTTATTTCATGTATCAGTGGCCCATGAATCCATATGGCCATTACGGTTTTCCCGGGCCGGCTTTGCACTTTGGCCGTCCCTATATGGCCCCTTATCAGTTTATGCAGTATCCTGGCTATGTGATTCCACATGCACCCATGCAGCCAATTGATTACAGAAGAATTAACCCCCACTACCCCTCAGTTGCATCCTATGATCTGCGTGTTCGTCACCACTTTCAAAATGCTGGGATGCATCGGGAAACTGCCTGTTCTGAGGTCCAAACAGATCCTAGTGATTCAGTCAACAAACTGATAGACAAAATTGAGAGTCTGAAGGCCTGTGAACTAGGCAGTGACAAGGGTCCCAACAATGTAGTCTCTTCTACCCCTGATGTGGTGCAGGGAGAGAAATTGACCCGTTTAAACGAAGACTCTAATTTGGAGGTTGCCACTAAAGAATGCAAGGAGGATCCGGTCACAAGGCCCACAACCTACAGTGACTCAGCATATGATGCAGAGTCTAGCCAGGGTAGATTGGATGAATGTGTGTTCTCAGATGTGCTGCCCCTTGACAGTTCCTCTGTccatgaggaggaggaggaagaggagaaagATGTCAATGAGGAAGATGAACCACAGACTGTTGCTGATGAAATATGCAGCCAAAATGAAATGTCTGCGAGTACAACTAGCAATGTGTTCTGTAGTGGTGTTCAAAGCATTGCAGATCCAACAGAATGCCACGATTTGGAGAAACTAGGTGATGAGCAGAAGCAGGATATCCCATCTGCGGATGCTGCTGCAGTTATAGAGCCTCTTATAAGTCTTTCTGAAGACTTTGACCTGCCATATCAAATCCTTCGCCTGCCCTGCAATAAGACAACAACTGGCCTCAGTCTTGAACGAGAGATTGACCCACTTGTCTACTTTGATTCTCCATCCACTCTGTTGCCCCCACAAAACTATTTGTCCTCAATTGGCAGTGCTTATTCCTACAGCTACTACCCACAAGTGACCCAAGAGCGCCAGAGTGTCTTAAGTCCATCCATAGATGAGCTCTCCTCCAGAGATGAAATGTTCTCCACTGATGTAGAGGATCTCGAAGTTGTTCCAGGGCATGTTTATGTTGGTGGTGGTAGGCTGGCAGAAGCCAGTGACATGCCAGTTCGCTCCCGAAAAGAGCTCCCAAGTGTAGATAAAACTTGCTCTGTTTGCCAGAAAACATGTGCATGCTGTGGTTCGACCTTGCAGGATGAGGTAGGAATGTGTAAAATGGCCGAACACAGCCATCCTGAAAGGGATGAGATGTCAGATCAAGACTGTGATTATGACCTCGAAGCAGAGGTTCGGAGCAACTGCGAGTCTCCAAGAGTGTCCAAAAGGAAGTGTTGCAGTAGGCATGCGCTGCCCTCTTGTGGGCATCATTGTGCCAAACACAGACACAGGAAGCTGCTTTGTGAAGGCCAGGAGAGCTGTGATCTACGTGAGCAGGCTCGAGTGCATCCCAAAGGAGAGTGCTGTGAGGAGTATGGTGCTCTGGCTAAAGCAGATAAGAGAATTCAAAAGGGTGCCTTGTGCAGGCCTTGTATTGagCAACAATGGAGAGAGGGGGTTGTGTCTGACCAAGAGAATTGGGCGAGCTGTGGTGCCAAACCGAGGTCTTGGAGGCAAGTTACTGGACCTCAGGATCAAGGGAGAACTCCATTGAGAAGGTCGACTTGTAAATCAATCCACCAGCAAAGGCCAAGAAGTGAATACAATGACTATGATGAGACCGAATTTACCTACTGCCAGAGGGGCAGAGGTTCTATGAAGAAAAGAGGCTCAAGATACTAAACCATTATGCACTGCTGTAATACTTAATGTATTACCCTAAACTTGTGTAAAATGCACTTCACTATAAATGTACACATGGACACTGTTCTTGACTGTATGTAAATGAAAGGTATGACAGTGATGTACACCTTGCTGCATTTCCAGTGCTCAAGTTAACTTTTTTTGGGTGCTGTGCATTCATCTTAATATTATGCTGAAACTGGTCTCACTGTACCAGACCTTGACCTATGCCTACAAGGCCTTTCTAATGTGTCTTGATCTGGGAGGTGTAGATCATTTCTGAAAAAGGGGCTCTTTGCATAATCAAGGACTGGCTCATTGAGACCAATTTCGAATGTTGGTCATTGGAGATGCAGCTGGTTCAAGGGGTGATGCAGGGAAAGATGGGGAAATTAAGTGGACAATCTGGCTATTCGGCCTCTTAGTTCAGatgtgtctttgtttttattactgtgcTGTTTTATACATCAGTGTAATGTTAACATGCAGAAAAATAAATTTGGCTATACAGTGTTGTGTCATTAAAGTTTCCGCATTGCA
>TCONS_00030996
TATTGCGGTGTTTTGTATCCTGTGCTGATTTTCTTCGTCTCCTCGTAGGAAATGGAAGGAATAAATAACAATTCACAACCAATGGGAGTTGGGCAACCTCACCACCCAGTAAACCACACAAGACCATTTTTCTATGTTCAGCCACCATCTCAGCCTTATTTCATGTATCAGTGGCCCATGAATCCATATGGCCATTACGGTTTTCCCGGGCCGGCTTTGCACTTTGGCCGTCCCTATATGGCCCCTTATCAGTTTATGCAGTATCCTGGCTATGTGATTCCACATGCACCCATGCAGCCAATTGATTACAGAAGAATTAACCCCCACTACCCCTCAGTTGCATCCTATGATCTGCGTGTTCGTCACCACTTTCAAAATGCTGGGATGCATCGGGAAACTGCCTGTTCTGAGGTCCAAACAGATCCTAGTGATTCAGTCAACAAACTGATAGACAAAATTGAGAGTCTGAAGGCCTGTGAACTAGGCAGTGACAAGGGTCCCAACAATGTAGTCTCTTCTACCCCTGATGTGGTGCAGGGAGAGAAATTGACCCGTTTAAACGAAGACTCTAATTTGGAGGTTGCCACTAAAGAATGCAAGGAGGATCCGGTCACAAGGCCCACAACCTACAGTGACTCAGCATATGATGCAGAGTCTAGCCAGGGTAGATTGGATGAATGTGTGTTCTCAGATGTGCTGCCCCTTGACAGTTCCTCTGTccatgaggaggaggaggaagaggagaaagATGTCAATGAGGAAGATGAACCACAGACTGTTGCTGATGAAATATGCAGCCAAAATGAAATGTCTGCGAGTACAACTAGCAATGTGTTCTGTAGTGGTGTTCAAAGCATTGCAGATCCAACAGAATGCCACGATTTGGAGAAACTAGGTGATGAGCAGAAGCAGGATATCCCATCTGCGGATGCTGCTGCAGTTATAGAGCCTCTTATAAGTCTTTCTGAAGACTTTGACCTGCCATATCAAATCCTTCGCCTGCCCTGCAATAAGACAACAACTGGCCTCAGTCTTGAACGAGAGATTGACCCACTTGTCTACTTTGATTCTCCATCCACTCTGTTGCCCCCACAAAACTATTTGTCCTCAATTGGCAGTGCTTATTCCTACAGCTACTACCCACAAGTGACCCAAGAGCGCCAGAGTGTCTTAAGTCCATCCATAGATGAGCTCTCCTCCAGAGATGAAATGTTCTCCACTGATGTAGAGGATCTCGAAGTTGTTCCAGGGCATGTTTATGTTGGTGGTGGTAGGCTGGCAGAAGCCAGTGACATGCCAGTTCGCTCCCGAAAAGAGCTCCCAAGTGTAGATAAAACTTGCTCTGTTTGCCAGAAAACATGTGCATGCTGTGGTTCGACCTTGCAGGATGAGGTAGGAATGTGTAAAATGGCCGAACACAGCCATCCTGAAAGGGATGAGATGTCAGATCAAGACTGTGATTATGACCTCGAAGCAGAGGTTCGGAGCAACTGCGAGTCTCCAAGAGTGTCCAAAAGGAAGTGTTGCAGTAGGCATGCGCTGCCCTCTTGTGGGCATCATTGTGCCAAACACAGACACAGGAAGCTGCTTTGTGAAGGCCAGGAGAGCTGTGATCTACGTGAGCAGGCTCGAGTGCATCCCAAAGGAGAGTGCTGTGAGGAGTATGGTGCTCTGGCTAAAGCAGATAAGAGAATTCAAAAGGGTGCCTTGTGCAGGCCTTGTATTGagCAACAATGGAGAGAGGGGGTTGTGTCTGACCAAGAGAATTGGGCGAGCTGTGGTGCCAAACCGAGGTCTTGGAGGCAAGTTACTGGACCTCAGGATCAAGGTAGgatatgtgtgtgtctctgtgtgaagtatgcttttgttttatttttttttttttttctccccaaagGGAGAACTCCATTGAGAAGGTCGACTTGTAAATCAATCCACCAGCAAAGGCCAAGAAGTGAATACAATGACTATGATGAGACCGAATTTACCTACTGCCAGAGGGGCAGAGGTATGTTGAGCAgtttaaaatgttaaactttttttttttttttctttttttttttcttctttgttctTATTTGTGCAAATTGTTCCTTCAGGTTCTATGAAGAAAAGAGGCTCAAGATACTAAACCATTATGCACTGCTGTAATACTTAATGTATTACCCTAAACTTGTGTAAAATGCACTTCACTATAAATGTACACATGGACACTGTTCTTGACTGTATGTAAATGAAAGGTATGACAGTGATGTACACCTTGCTGCATTTCCAGTGCTCAAGTTAACTTTTTTTGGGTGCTGTGCATTCATCTTAATATTATGCTGAAACTGGTCTCACTGTACCAGACCTTGACCTATGCCTACAAGGCCTTTCTAATGTGTCTTGATCTGGGAGGTGTAGATCATTTCTGAAAAAGGGGCTCTTTGCATAATCAAGGACTGGCTCATTGAGACCAATTTCGAATGTTGGTCATTGGAGATGCAGCTGGTTCAAGGGGTGATGCAGGGAAAGATGGGGAAATTAAGTGGACAATCTGGCTATTCGGCCTCTTAGTTCAGatgtgtctttgtttttattactgtgcTGTTTTATACATCAGTGTAATGTTAACATGCAGAAAAATAAATTTGGCTATACAGTGTTGTGTCATTAAAGTTTCCGCATTGCACTTGACATGTGTCCCAGTTTGTTTTCACTACTGTTCTTTTTATAGTGGAAAAAGCTCCACATTAAGGTGTGTCtataattgtttgcaacagttatGCATCACATCTGCTCTTAATTTGAGCCCTAGATCGTTAGTGTGGACTTGACATAATTCCAGCATCTCAGCTAGAAGACTGTATAGTGCTTTGTTAATTCCAGGCTCAAATGTAATCATGAAAACTAAGAAACCTGTTGAACTCTTTACTAGTAAGggttaaaataagtaaaatattgcAAAGACAGTAACAGACAAAAATCTGTAACAGACAATTTATGTGTTAAACAAAAGTGGGCTACTA
>TCONS_00030995
TATTGCGGTGTTTTGTATCCTGTGCTGATTTTCTTCGTCTCCTCGTAGGAAATGGAAGGAATAAATAACAATTCACAACCAATGGGAGTTGGGCAACCTCACCACCCAGTAAACCACACAAGACCATTTTTCTATGTTCAGCCACCATCTCAGCCTTATTTCATGTATCAGTGGCCCATGAATCCATATGGCCATTACGGTTTTCCCGGGCCGGCTTTGCACTTTGGCCGTCCCTATATGGCCCCTTATCAGTTTATGCAGTATCCTGGCTATGTGATTCCACATGCACCCATGCAGCCAATTGATTACAGAAGAATTAACCCCCACTACCCCTCAGTTGCATCCTATGATCTGCGTGTTCGTCACCACTTTCAAAATGCTGGGATGCATCGGGAAACTGCCTGTTCTGAGGTCCAAACAGATCCTAGTGATTCAGTCAACAAACTGATAGACAAAATTGAGAGTCTGAAGGCCTGTGAACTAGGCAGTGACAAGGGTCCCAACAATGTAGTCTCTTCTACCCCTGATGTGGTGCAGGGAGAGAAATTGACCCGTTTAAACGAAGACTCTAATTTGGAGGTTGCCACTAAAGAATGCAAGGAGGATCCGGTCACAAGGCCCACAACCTACAGTGACTCAGCATATGATGCAGAGTCTAGCCAGGGTAGATTGGATGAATGTGTGTTCTCAGATGTGCTGCCCCTTGACAGTTCCTCTGTccatgaggaggaggaggaagaggagaaagATGTCAATGAGGAAGATGAACCACAGACTGTTGCTGATGAAATATGCAGCCAAAATGAAATGTCTGCGAGTACAACTAGCAATGTGTTCTGTAGTGGTGTTCAAAGCATTGCAGATCCAACAGAATGCCACGATTTGGAGAAACTAGGTGATGAGCAGAAGCAGGATATCCCATCTGCGGATGCTGCTGCAGTTATAGAGCCTCTTATAAGTCTTTCTGAAGACTTTGACCTGCCATATCAAATCCTTCGCCTGCCCTGCAATAAGACAACAACTGGCCTCAGTCTTGAACGAGAGATTGACCCACTTGTCTACTTTGATTCTCCATCCACTCTGTTGCCCCCACAAAACTATTTGTCCTCAATTGGCAGTGCTTATTCCTACAGCTACTACCCACAAGTGACCCAAGAGCGCCAGAGTGTCTTAAGTCCATCCATAGATGAGCTCTCCTCCAGAGATGAAATGTTCTCCACTGATGTAGAGGATCTCGAAGTTGTTCCAGGGCATGTTTATGTTGGTGGTGGTAGGCTGGCAGAAGCCAGTGACATGCCAGTTCGCTCCCGAAAAGAGCTCCCAAGTGTAGATAAAACTTGCTCTGTTTGCCAGAAAACATGTGCATGCTGTGGTTCGACCTTGCAGGATGAGGTAGGAATGTGTAAAATGGCCGAACACAGCCATCCTGAAAGGGATGAGATGTCAGATCAAGACTGTGATTATGACCTCGAAGCAGAGGTTCGGAGCAACTGCGAGTCTCCAAGAGTGTCCAAAAGGAAGTGTTGCAGTAGGCATGCGCTGCCCTCTTGTGGGCATCATTGTGCCAAACACAGACACAGGAAGCTGCTTTGTGAAGGCCAGGAGAGCTGTGATCTACGTGAGCAGGCTCGAGTGCATCCCAAAGGAGAGTGCTGTGAGGAGTATGGTGCTCTGGCTAAAGCAGATAAGAGAATTCAAAAGGGTGCCTTGTGCAGGCCTTGTATTGagCAACAATGGAGAGAGGGGGTTGTGTCTGACCAAGAGAATTGGGCGAGCTGTGGTGCCAAACCGAGGTCTTGGAGGCAAGTTACTGGACCTCAGGATCAAGGGAGAACTCCATTGAGAAGGTCGACTTGTAAATCAATCCACCAGCAAAGGCCAAGAAGTGAATACAATGACTATGATGAGACCGAATTTACCTACTGCCAGAGGGGCAGAGGTTCTATGAAGAAAAGAGGCTCAAGATACTAAACCATTATGCACTGCTGTAATACTTAATGTATTACCCTAAACTTGTGTAAAATGCACTTCACTATAAATGTACACATGGACACTGTTCTTGACTGTATGTAAATGAAAGGTATGACAGTGATGTACACCTTGCTGCATTTCCAGTGCTCAAGTTAACTTTTTTTGGGTGCTGTGCATTCATCTTAATATTATGCTGAAACTGGTCTCACTGTACCAGACCTTGACCTATGCCTACAAGGCCTTTCTAATGTGTCTTGATCTGGGAGGTGTAGATCATTTCTGAAAAAGGGGCTCTTTGCATAATCAAGGACTGGCTCATTGAGACCAATTTCGAATGTTGGTCATTGGAGATGCAGCTGGTTCAAGGGGTGATGCAGGGAAAGATGGGGAAATTAAGTGGACAATCTGGCTATTCGGCCTCTTAGTTCAGatgtgtctttgtttttattactgtgcTGTTTTATACATCAGTGTAATGTTAACATGCAGAAAAATAAATTTGGCTATACAGTGTTGTGTCATTAAAGTTTCCGCATTGCACTTGACATGTGTCCCAGTTTGTTTTCACTACTGTTCTTTTTATAGTGGAAAAAGCTCCACATTAAGGTGTGTCtataattgtttgcaacagttatGCATCACATCTGCTCTTAATTTGAGCCCTAGATCGTTAGTGTGGACTTGACATAATTCCAGCATCTCAGCTAGAAGACTGTATAGTGCTTTGTTAATTCCAGGCTCAAATGTAATCATGAAAACTAAGAAACCTGTTGAACTCTTTACTAGTAAGggttaaaataagtaaaatattgcAAAGACAGTAACAGACAAAAATCTGTAACAGACAATTTATGTGTTAAACAAAAGTGGGCTACTA
>TCONS_00030997
GAAATGTTCTCCACTGATGTAGAGGATCTCGAAGTTGTTCCAGGGCATGTTTATGTTGGTGGTGGTAGGCTGGCAGAAGCCAGTGACATGCCAGTTCGCTCCCGAAAAGAGCTCCCAAGTGTAGATAAAACTTGCTCTGTTTGCCAGAAAACATGTGCATGCTGTGGTTCGACCTTGCAGGATGAGGTAGGAATGTGTAAAATGGCCGAACACAGCCATCCTGAAAGGGATGAGATGTCAGATCAAGACTGTGATTATGACCTCGAAGCAGAGGTTCGGAGCAACTGCGAGTCTCCAAGAGTGTCCAAAAGGAAGTGTTGCAGTAGGCATGCGCTGCCCTCTTGTGGGCATCATTGTGCCAAACACAGACACAGGAAGCTGCTTTGTGAAGGCCAGGAGAGCTGTGATCTACGTGAGCAGGCTCGAGTGCATCCCAAAGGAGAGTGCTGTGAGGAGTATGGTGCTCTGGCTAAAGCAGATAAGAGAATTCAAAAGGGTGCCTTGTGCAGGCCTTGTATTGagCAACAATGGAGAGAGGGGGTTGTGTCTGACCAAGAGAATTGGGCGAGCTGTGGTGCCAAACCGAGGTCTTGGAGGGAGAACTCCATTGAGAAGGTCGACTTGTAAATCAATCCACCAGCAAAGGCCAAGAAGTGAATACAATGACTATGATGAGACCGAATTTACCTACTGCCAGAGGGGCAGAGGTTCTATGAAGAAAAGAGGCTCAAGATACTAAACCATTATGCACTGCTGTAATACTTAATGTATTACCCTAAACTTGTGTAAAATGCACTTCACTATAAATGTACACATGGACACTGTTCTTGACTGTATGTAAATGAAAGGTATGACAGTGATGTACACCTTGCTGCATTTCCAGTGCTCAAGT

Function

symbol description
buc Involved in oocyte animal/vegetal axis specification. Acts upstream of or within morphogenesis of follicular epithelium and pole plasm assembly. Located in P granule and mitochondrial cloud. Is expressed in blastomere; female organism; and germ line cell.

GO:

id name namespace
GO:0048477 oogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0007283 spermatogenesis biological_process
GO:0007314 oocyte anterior/posterior axis specification biological_process
GO:0007315 pole plasm assembly biological_process
GO:0016333 morphogenesis of follicular epithelium biological_process
GO:0060832 oocyte animal/vegetal axis specification biological_process
GO:0032154 cleavage furrow cellular_component
GO:0043186 P granule cellular_component
GO:0060293 germ plasm cellular_component
GO:0005737 cytoplasm cellular_component
GO:0032019 mitochondrial cloud cellular_component
GO:0005515 protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070117-694 Involved in oocyte animal/vegetal axis specification. Acts upstream of or within morphogenesis of follicular epithelium and pole plasm assembly. Located in P granule and mitochondrial cloud. Is expressed in blastomere; female organism; and germ line cell.

Ensembl:

ensembl_id ENSDARG00000096095

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030994 False 2640 mRNA 0.45 7 27855102 27859221
TCONS_00030996 False 3008 mRNA 0.44 4 27855346 27859558
TCONS_00030995 False 2848 mRNA 0.44 6 27855346 27859558
TCONS_00030997 True 892 nonsense_mediated_decay 0.47 4 27857688 27858834
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_015496 FO834800.2 coding upstream 12936 27830436 ~ 27842166 (+)
XLOC_015495 tmem68 coding upstream 189563 27651984 ~ 27665539 (+)
XLOC_015494 zswim5 coding upstream 311160 27491066 ~ 27543942 (+)
XLOC_015493 elovl8a coding upstream 445396 27403300 ~ 27409706 (+)
XLOC_015492 selenop2 coding upstream 453997 27394798 ~ 27401105 (+)
XLOC_015498 rnf152 coding downstream 8272 27867830 ~ 27871054 (+)
XLOC_015499 mc4r coding downstream 73223 27932781 ~ 27933864 (+)
XLOC_015500 CR925777.1 coding downstream 115996 27975554 ~ 28038625 (+)
XLOC_015501 NA coding downstream 334580 28194138 ~ 28194608 (+)
XLOC_015502 NA coding downstream 385902 28245460 ~ 28350447 (+)
XLOC_015489 BX649522.1 non-coding upstream 530921 27321014 ~ 27324181 (+)
XLOC_015488 BX649522.3 non-coding upstream 612391 27218149 ~ 27242711 (+)
XLOC_015486 BX511023.1 non-coding upstream 844757 27000542 ~ 27010345 (+)
XLOC_015485 NA non-coding upstream 1112896 26721068 ~ 26742206 (+)
XLOC_015483 BX248497.1 non-coding upstream 1182255 26667680 ~ 26672847 (+)
XLOC_015503 NA non-coding downstream 534385 28393943 ~ 28423487 (+)
XLOC_015511 NA non-coding downstream 1852652 29712210 ~ 29727457 (+)

Expression

Expression of XLOC_015497(buc) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Expression of XLOC_015497(buc) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network